Experiment: m.b. benzoic 0.58 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4552 and Echvi_4553 are separated by 107 nucleotides Echvi_4553 and Echvi_4554 are separated by 18 nucleotides Echvi_4554 and Echvi_4555 are separated by 340 nucleotides
Echvi_4552: Echvi_4552 - Bacterial Ig-like domain (group 4)./Putative glycosyl hydrolase of unknown function (DUF1680)., at 5,447,081 to 5,450,209
_4552
Echvi_4553: Echvi_4553 - hypothetical protein, at 5,450,317 to 5,450,781
_4553
Echvi_4554: Echvi_4554 - Outer membrane receptor proteins, mostly Fe transport, at 5,450,800 to 5,453,031
_4554
Echvi_4555: Echvi_4555 - hypothetical protein, at 5,453,372 to 5,454,142
_4555
Position (kb) 5450
5451
5452
5453
5454 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 5449.813 kb on + strand, within Echvi_4552 at 5449.895 kb on + strand, within Echvi_4552 at 5449.895 kb on + strand, within Echvi_4552 at 5449.896 kb on - strand, within Echvi_4552 at 5449.912 kb on + strand at 5449.912 kb on + strand at 5450.065 kb on - strand at 5450.065 kb on - strand at 5450.144 kb on + strand at 5450.145 kb on - strand at 5450.183 kb on + strand at 5450.263 kb on + strand at 5450.263 kb on + strand at 5450.318 kb on + strand at 5450.323 kb on + strand at 5450.323 kb on + strand at 5450.324 kb on - strand at 5450.329 kb on - strand at 5450.329 kb on - strand at 5450.382 kb on + strand, within Echvi_4553 at 5450.423 kb on - strand, within Echvi_4553 at 5450.442 kb on - strand, within Echvi_4553 at 5450.563 kb on - strand, within Echvi_4553 at 5450.601 kb on + strand, within Echvi_4553 at 5450.784 kb on + strand at 5450.784 kb on + strand at 5450.784 kb on + strand at 5450.784 kb on + strand at 5450.784 kb on + strand at 5450.784 kb on + strand at 5450.784 kb on + strand at 5450.784 kb on + strand at 5450.785 kb on - strand at 5450.785 kb on - strand at 5450.785 kb on - strand at 5450.785 kb on - strand at 5450.785 kb on - strand at 5450.786 kb on + strand at 5450.786 kb on + strand at 5450.794 kb on + strand at 5451.007 kb on + strand at 5451.037 kb on + strand, within Echvi_4554 at 5451.038 kb on - strand, within Echvi_4554 at 5451.090 kb on - strand, within Echvi_4554 at 5451.094 kb on - strand, within Echvi_4554 at 5451.094 kb on - strand, within Echvi_4554 at 5451.097 kb on - strand, within Echvi_4554 at 5451.135 kb on + strand, within Echvi_4554 at 5451.135 kb on + strand, within Echvi_4554 at 5451.135 kb on + strand, within Echvi_4554 at 5451.171 kb on - strand, within Echvi_4554 at 5451.176 kb on + strand, within Echvi_4554 at 5451.176 kb on + strand, within Echvi_4554 at 5451.176 kb on + strand, within Echvi_4554 at 5451.176 kb on + strand, within Echvi_4554 at 5451.176 kb on + strand, within Echvi_4554 at 5451.177 kb on - strand, within Echvi_4554 at 5451.177 kb on - strand, within Echvi_4554 at 5451.211 kb on - strand, within Echvi_4554 at 5451.264 kb on + strand, within Echvi_4554 at 5451.264 kb on + strand, within Echvi_4554 at 5451.265 kb on - strand, within Echvi_4554 at 5451.266 kb on + strand, within Echvi_4554 at 5451.267 kb on - strand, within Echvi_4554 at 5451.327 kb on - strand, within Echvi_4554 at 5451.331 kb on - strand, within Echvi_4554 at 5451.345 kb on - strand, within Echvi_4554 at 5451.468 kb on - strand, within Echvi_4554 at 5451.655 kb on + strand, within Echvi_4554 at 5451.677 kb on + strand, within Echvi_4554 at 5451.678 kb on - strand, within Echvi_4554 at 5451.678 kb on - strand, within Echvi_4554 at 5451.694 kb on - strand, within Echvi_4554 at 5451.694 kb on - strand, within Echvi_4554 at 5451.694 kb on - strand, within Echvi_4554 at 5451.773 kb on + strand, within Echvi_4554 at 5451.779 kb on + strand, within Echvi_4554 at 5451.779 kb on + strand, within Echvi_4554 at 5451.779 kb on + strand, within Echvi_4554 at 5451.780 kb on - strand, within Echvi_4554 at 5451.822 kb on + strand, within Echvi_4554 at 5451.823 kb on - strand, within Echvi_4554 at 5451.823 kb on - strand, within Echvi_4554 at 5451.850 kb on + strand, within Echvi_4554 at 5451.851 kb on - strand, within Echvi_4554 at 5451.851 kb on - strand, within Echvi_4554 at 5451.904 kb on + strand, within Echvi_4554 at 5451.905 kb on - strand, within Echvi_4554 at 5451.960 kb on - strand, within Echvi_4554 at 5451.973 kb on - strand, within Echvi_4554 at 5451.974 kb on + strand, within Echvi_4554 at 5451.990 kb on - strand, within Echvi_4554 at 5452.061 kb on + strand, within Echvi_4554 at 5452.061 kb on + strand, within Echvi_4554 at 5452.061 kb on + strand, within Echvi_4554 at 5452.062 kb on - strand, within Echvi_4554 at 5452.093 kb on + strand, within Echvi_4554 at 5452.248 kb on - strand, within Echvi_4554 at 5452.253 kb on - strand, within Echvi_4554 at 5452.330 kb on + strand, within Echvi_4554 at 5452.331 kb on - strand, within Echvi_4554 at 5452.331 kb on - strand, within Echvi_4554 at 5452.510 kb on - strand, within Echvi_4554 at 5452.551 kb on - strand, within Echvi_4554 at 5452.551 kb on - strand, within Echvi_4554 at 5452.554 kb on + strand, within Echvi_4554 at 5452.555 kb on - strand, within Echvi_4554 at 5452.598 kb on + strand, within Echvi_4554 at 5452.598 kb on + strand, within Echvi_4554 at 5452.735 kb on - strand, within Echvi_4554 at 5452.735 kb on - strand, within Echvi_4554 at 5452.899 kb on + strand at 5453.011 kb on + strand at 5453.153 kb on + strand at 5453.163 kb on - strand at 5453.166 kb on + strand at 5453.166 kb on + strand at 5453.167 kb on - strand at 5453.190 kb on - strand at 5453.196 kb on + strand at 5453.196 kb on + strand at 5453.197 kb on - strand at 5453.197 kb on - strand at 5453.303 kb on + strand at 5453.309 kb on - strand at 5453.344 kb on + strand at 5453.344 kb on + strand at 5453.344 kb on + strand at 5453.358 kb on + strand at 5453.382 kb on + strand at 5453.407 kb on - strand at 5453.407 kb on - strand at 5453.410 kb on - strand at 5453.554 kb on + strand, within Echvi_4555 at 5453.555 kb on - strand, within Echvi_4555 at 5453.556 kb on + strand, within Echvi_4555 at 5453.556 kb on + strand, within Echvi_4555 at 5453.556 kb on + strand, within Echvi_4555 at 5453.557 kb on - strand, within Echvi_4555 at 5453.581 kb on + strand, within Echvi_4555 at 5453.654 kb on + strand, within Echvi_4555 at 5453.665 kb on + strand, within Echvi_4555 at 5453.665 kb on + strand, within Echvi_4555 at 5453.666 kb on - strand, within Echvi_4555 at 5453.666 kb on - strand, within Echvi_4555 at 5453.669 kb on + strand, within Echvi_4555 at 5453.669 kb on + strand, within Echvi_4555 at 5453.669 kb on + strand, within Echvi_4555 at 5453.669 kb on + strand, within Echvi_4555 at 5453.669 kb on + strand, within Echvi_4555 at 5453.670 kb on - strand, within Echvi_4555 at 5453.670 kb on - strand, within Echvi_4555 at 5453.670 kb on - strand, within Echvi_4555 at 5453.670 kb on - strand, within Echvi_4555 at 5453.670 kb on - strand, within Echvi_4555 at 5453.670 kb on - strand, within Echvi_4555 at 5453.670 kb on - strand, within Echvi_4555 at 5453.670 kb on - strand, within Echvi_4555 at 5453.670 kb on - strand, within Echvi_4555 at 5453.703 kb on + strand, within Echvi_4555 at 5453.704 kb on - strand, within Echvi_4555 at 5453.704 kb on - strand, within Echvi_4555 at 5453.704 kb on - strand, within Echvi_4555 at 5453.704 kb on - strand, within Echvi_4555 at 5453.735 kb on + strand, within Echvi_4555 at 5453.736 kb on - strand, within Echvi_4555 at 5453.742 kb on + strand, within Echvi_4555 at 5453.745 kb on + strand, within Echvi_4555 at 5453.746 kb on - strand, within Echvi_4555 at 5453.872 kb on - strand, within Echvi_4555 at 5453.872 kb on - strand, within Echvi_4555 at 5453.872 kb on - strand, within Echvi_4555 at 5453.905 kb on + strand, within Echvi_4555 at 5453.905 kb on + strand, within Echvi_4555 at 5453.906 kb on - strand, within Echvi_4555 at 5453.979 kb on + strand, within Echvi_4555 at 5453.979 kb on + strand, within Echvi_4555 at 5454.028 kb on + strand, within Echvi_4555 at 5454.029 kb on - strand, within Echvi_4555 at 5454.029 kb on - strand, within Echvi_4555 at 5454.029 kb on - strand, within Echvi_4555 at 5454.030 kb on + strand, within Echvi_4555 at 5454.030 kb on + strand, within Echvi_4555 at 5454.030 kb on + strand, within Echvi_4555 at 5454.030 kb on + strand, within Echvi_4555 at 5454.031 kb on - strand, within Echvi_4555 at 5454.031 kb on - strand, within Echvi_4555 at 5454.031 kb on - strand, within Echvi_4555
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.58 mg/ml remove 5,449,813 + Echvi_4552 0.87 +0.3 5,449,895 + Echvi_4552 0.90 -0.4 5,449,895 + Echvi_4552 0.90 +3.0 5,449,896 - Echvi_4552 0.90 +0.1 5,449,912 + +2.0 5,449,912 + +0.1 5,450,065 - +0.3 5,450,065 - -0.2 5,450,144 + +0.0 5,450,145 - -0.1 5,450,183 + +0.5 5,450,263 + -0.2 5,450,263 + -0.3 5,450,318 + -0.4 5,450,323 + +0.7 5,450,323 + +0.4 5,450,324 - +0.2 5,450,329 - +0.7 5,450,329 - +0.6 5,450,382 + Echvi_4553 0.14 -1.1 5,450,423 - Echvi_4553 0.23 -1.1 5,450,442 - Echvi_4553 0.27 +2.1 5,450,563 - Echvi_4553 0.53 -0.2 5,450,601 + Echvi_4553 0.61 +0.1 5,450,784 + +1.4 5,450,784 + -0.2 5,450,784 + +0.1 5,450,784 + -0.4 5,450,784 + -0.8 5,450,784 + -0.9 5,450,784 + -1.1 5,450,784 + +0.4 5,450,785 - -0.4 5,450,785 - +0.0 5,450,785 - +0.1 5,450,785 - -0.9 5,450,785 - -0.3 5,450,786 + -0.6 5,450,786 + +0.7 5,450,794 + -0.3 5,451,007 + +0.6 5,451,037 + Echvi_4554 0.11 +0.7 5,451,038 - Echvi_4554 0.11 +0.1 5,451,090 - Echvi_4554 0.13 +0.8 5,451,094 - Echvi_4554 0.13 +0.7 5,451,094 - Echvi_4554 0.13 +0.3 5,451,097 - Echvi_4554 0.13 -0.7 5,451,135 + Echvi_4554 0.15 +0.8 5,451,135 + Echvi_4554 0.15 +0.3 5,451,135 + Echvi_4554 0.15 +0.6 5,451,171 - Echvi_4554 0.17 +1.0 5,451,176 + Echvi_4554 0.17 +1.0 5,451,176 + Echvi_4554 0.17 +0.7 5,451,176 + Echvi_4554 0.17 +0.1 5,451,176 + Echvi_4554 0.17 -0.3 5,451,176 + Echvi_4554 0.17 -0.3 5,451,177 - Echvi_4554 0.17 +0.1 5,451,177 - Echvi_4554 0.17 +0.2 5,451,211 - Echvi_4554 0.18 -0.2 5,451,264 + Echvi_4554 0.21 +1.7 5,451,264 + Echvi_4554 0.21 -0.6 5,451,265 - Echvi_4554 0.21 -2.1 5,451,266 + Echvi_4554 0.21 -0.4 5,451,267 - Echvi_4554 0.21 -0.1 5,451,327 - Echvi_4554 0.24 +0.9 5,451,331 - Echvi_4554 0.24 -0.3 5,451,345 - Echvi_4554 0.24 +0.1 5,451,468 - Echvi_4554 0.30 -1.0 5,451,655 + Echvi_4554 0.38 -0.4 5,451,677 + Echvi_4554 0.39 +0.3 5,451,678 - Echvi_4554 0.39 +0.0 5,451,678 - Echvi_4554 0.39 +0.8 5,451,694 - Echvi_4554 0.40 +0.7 5,451,694 - Echvi_4554 0.40 +0.1 5,451,694 - Echvi_4554 0.40 -0.3 5,451,773 + Echvi_4554 0.44 -1.4 5,451,779 + Echvi_4554 0.44 -0.4 5,451,779 + Echvi_4554 0.44 +0.6 5,451,779 + Echvi_4554 0.44 -0.9 5,451,780 - Echvi_4554 0.44 -0.5 5,451,822 + Echvi_4554 0.46 +0.8 5,451,823 - Echvi_4554 0.46 +0.6 5,451,823 - Echvi_4554 0.46 -1.3 5,451,850 + Echvi_4554 0.47 -1.3 5,451,851 - Echvi_4554 0.47 +0.4 5,451,851 - Echvi_4554 0.47 -1.2 5,451,904 + Echvi_4554 0.49 -0.3 5,451,905 - Echvi_4554 0.50 +0.3 5,451,960 - Echvi_4554 0.52 +1.5 5,451,973 - Echvi_4554 0.53 +0.4 5,451,974 + Echvi_4554 0.53 +0.7 5,451,990 - Echvi_4554 0.53 -0.2 5,452,061 + Echvi_4554 0.56 -0.4 5,452,061 + Echvi_4554 0.56 +1.7 5,452,061 + Echvi_4554 0.56 -2.4 5,452,062 - Echvi_4554 0.57 +0.7 5,452,093 + Echvi_4554 0.58 +2.3 5,452,248 - Echvi_4554 0.65 +1.7 5,452,253 - Echvi_4554 0.65 +0.7 5,452,330 + Echvi_4554 0.69 +0.2 5,452,331 - Echvi_4554 0.69 -0.1 5,452,331 - Echvi_4554 0.69 -0.2 5,452,510 - Echvi_4554 0.77 +0.3 5,452,551 - Echvi_4554 0.78 +0.3 5,452,551 - Echvi_4554 0.78 +0.3 5,452,554 + Echvi_4554 0.79 +0.8 5,452,555 - Echvi_4554 0.79 +0.9 5,452,598 + Echvi_4554 0.81 +1.1 5,452,598 + Echvi_4554 0.81 +1.4 5,452,735 - Echvi_4554 0.87 -0.3 5,452,735 - Echvi_4554 0.87 -0.6 5,452,899 + -0.5 5,453,011 + +0.6 5,453,153 + +0.6 5,453,163 - -0.7 5,453,166 + +1.3 5,453,166 + +0.1 5,453,167 - -0.6 5,453,190 - -0.4 5,453,196 + -0.4 5,453,196 + +0.1 5,453,197 - -0.7 5,453,197 - +0.9 5,453,303 + +0.1 5,453,309 - -1.4 5,453,344 + +0.3 5,453,344 + +0.7 5,453,344 + +1.1 5,453,358 + -0.2 5,453,382 + -0.1 5,453,407 - -1.5 5,453,407 - +0.5 5,453,410 - -0.3 5,453,554 + Echvi_4555 0.24 -2.1 5,453,555 - Echvi_4555 0.24 -0.3 5,453,556 + Echvi_4555 0.24 -1.5 5,453,556 + Echvi_4555 0.24 -1.4 5,453,556 + Echvi_4555 0.24 +0.3 5,453,557 - Echvi_4555 0.24 +0.1 5,453,581 + Echvi_4555 0.27 -0.0 5,453,654 + Echvi_4555 0.37 +0.5 5,453,665 + Echvi_4555 0.38 +0.0 5,453,665 + Echvi_4555 0.38 -1.1 5,453,666 - Echvi_4555 0.38 +0.3 5,453,666 - Echvi_4555 0.38 -0.5 5,453,669 + Echvi_4555 0.39 +0.8 5,453,669 + Echvi_4555 0.39 -0.3 5,453,669 + Echvi_4555 0.39 -0.6 5,453,669 + Echvi_4555 0.39 -0.2 5,453,669 + Echvi_4555 0.39 +0.2 5,453,670 - Echvi_4555 0.39 +0.8 5,453,670 - Echvi_4555 0.39 -0.2 5,453,670 - Echvi_4555 0.39 +0.5 5,453,670 - Echvi_4555 0.39 -0.5 5,453,670 - Echvi_4555 0.39 -0.4 5,453,670 - Echvi_4555 0.39 +0.7 5,453,670 - Echvi_4555 0.39 +0.8 5,453,670 - Echvi_4555 0.39 +0.0 5,453,670 - Echvi_4555 0.39 -0.3 5,453,703 + Echvi_4555 0.43 -0.9 5,453,704 - Echvi_4555 0.43 -0.3 5,453,704 - Echvi_4555 0.43 +0.0 5,453,704 - Echvi_4555 0.43 -0.4 5,453,704 - Echvi_4555 0.43 -0.7 5,453,735 + Echvi_4555 0.47 -1.1 5,453,736 - Echvi_4555 0.47 -2.3 5,453,742 + Echvi_4555 0.48 -0.4 5,453,745 + Echvi_4555 0.48 -0.6 5,453,746 - Echvi_4555 0.49 +0.6 5,453,872 - Echvi_4555 0.65 +0.3 5,453,872 - Echvi_4555 0.65 -0.9 5,453,872 - Echvi_4555 0.65 -0.7 5,453,905 + Echvi_4555 0.69 -0.1 5,453,905 + Echvi_4555 0.69 -1.9 5,453,906 - Echvi_4555 0.69 +1.7 5,453,979 + Echvi_4555 0.79 +0.6 5,453,979 + Echvi_4555 0.79 -1.7 5,454,028 + Echvi_4555 0.85 +1.6 5,454,029 - Echvi_4555 0.85 +0.4 5,454,029 - Echvi_4555 0.85 +1.7 5,454,029 - Echvi_4555 0.85 -0.3 5,454,030 + Echvi_4555 0.85 +0.4 5,454,030 + Echvi_4555 0.85 -0.2 5,454,030 + Echvi_4555 0.85 -1.4 5,454,030 + Echvi_4555 0.85 +0.1 5,454,031 - Echvi_4555 0.85 +1.7 5,454,031 - Echvi_4555 0.85 -1.1 5,454,031 - Echvi_4555 0.85 +0.6
Or see this region's nucleotide sequence