Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4443

Experiment: m.b. benzoic 0.58 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. benzoic 0.58 mg/ml
5,314,023	+		Echvi_4442	0.24	-0.1
5,314,025	+		Echvi_4442	0.24	+0.8
5,314,025	+		Echvi_4442	0.24	-0.5
5,314,110	-		Echvi_4442	0.31	+2.3
5,314,136	+		Echvi_4442	0.33	-1.2
5,314,136	+		Echvi_4442	0.33	+0.9
5,314,137	-		Echvi_4442	0.33	-1.0
5,314,146	+		Echvi_4442	0.34	-0.4
5,314,191	+		Echvi_4442	0.37	-0.4
5,314,191	+		Echvi_4442	0.37	+0.1
5,314,213	+		Echvi_4442	0.39	+0.2
5,314,213	+		Echvi_4442	0.39	+0.3
5,314,214	-		Echvi_4442	0.39	+0.1
5,314,214	-		Echvi_4442	0.39	-1.1
5,314,214	-		Echvi_4442	0.39	-0.2
5,314,214	-		Echvi_4442	0.39	+0.2
5,314,260	+		Echvi_4442	0.43	-0.4
5,314,260	+		Echvi_4442	0.43	+0.6
5,314,260	+		Echvi_4442	0.43	-1.5
5,314,273	+		Echvi_4442	0.44	+0.4
5,314,273	+		Echvi_4442	0.44	+0.1
5,314,276	+		Echvi_4442	0.44	-0.2
5,314,276	+		Echvi_4442	0.44	-0.1
5,314,277	-		Echvi_4442	0.44	-0.1
5,314,324	-		Echvi_4442	0.48	+0.3
5,314,370	-		Echvi_4442	0.52	+0.7
5,314,379	-		Echvi_4442	0.53	-0.3
5,314,407	+		Echvi_4442	0.55	-0.6
5,314,410	+		Echvi_4442	0.55	-0.2
5,314,410	+		Echvi_4442	0.55	+0.2
5,314,411	-		Echvi_4442	0.55	-0.5
5,314,423	+		Echvi_4442	0.56	-0.9
5,314,448	-		Echvi_4442	0.58	+0.5
5,314,475	-		Echvi_4442	0.60	+1.2
5,314,488	+		Echvi_4442	0.61	+1.1
5,314,531	+		Echvi_4442	0.65	-1.9
5,314,531	+		Echvi_4442	0.65	-1.1
5,314,534	-		Echvi_4442	0.65	-0.1
5,314,565	+		Echvi_4442	0.68	+0.2
5,314,565	+		Echvi_4442	0.68	+0.5
5,314,565	+		Echvi_4442	0.68	+1.5
5,314,570	-		Echvi_4442	0.68	+0.5
5,314,570	-		Echvi_4442	0.68	+0.4
5,314,609	-		Echvi_4442	0.71	-0.0
5,314,682	+		Echvi_4442	0.77	-0.4
5,314,683	-		Echvi_4442	0.77	+0.6
5,314,696	+		Echvi_4442	0.78	+0.4
5,314,696	+		Echvi_4442	0.78	-0.7
5,314,697	-		Echvi_4442	0.78	+0.7
5,314,720	-		Echvi_4442	0.80	-0.6
5,314,750	-		Echvi_4442	0.83	+0.2
5,314,752	+		Echvi_4442	0.83	+0.8
5,314,753	-		Echvi_4442	0.83	+0.6
5,314,790	-		Echvi_4442	0.86	+1.2
5,314,800	+		Echvi_4442	0.87	+1.5
5,314,866	+				+0.2
5,314,867	-				+0.6
5,314,867	-				-0.6
5,314,867	-				-0.3
5,314,867	-				+0.9
5,314,867	-				-0.2
5,314,874	-				+1.5
5,314,874	-				-0.6
5,314,906	-				+0.1
5,314,986	-				+0.5
5,314,999	-				-0.1
5,315,119	+				-0.4
5,315,154	+				+0.1
5,315,173	+				-0.1
5,315,173	+				-0.4
5,315,174	-				-1.0
5,315,175	+				+0.4
5,315,175	+				-1.0
5,315,176	-				-1.3
5,315,176	-				+0.8
5,315,212	-		Echvi_4443	0.12	+0.4
5,315,212	-		Echvi_4443	0.12	-0.9
5,315,303	+		Echvi_4443	0.18	-0.1
5,315,304	-		Echvi_4443	0.18	+0.0
5,315,307	+		Echvi_4443	0.18	-0.7
5,315,307	+		Echvi_4443	0.18	+1.1
5,315,308	-		Echvi_4443	0.18	+0.6
5,315,308	-		Echvi_4443	0.18	-0.6
5,315,332	+		Echvi_4443	0.20	-0.9
5,315,339	+		Echvi_4443	0.20	-0.8
5,315,339	+		Echvi_4443	0.20	+0.2
5,315,339	+		Echvi_4443	0.20	-0.0
5,315,340	-		Echvi_4443	0.20	+1.2
5,315,340	-		Echvi_4443	0.20	-0.6
5,315,342	-		Echvi_4443	0.20	-1.7
5,315,342	-		Echvi_4443	0.20	-1.3
5,315,342	-		Echvi_4443	0.20	-0.2
5,315,342	-		Echvi_4443	0.20	-1.0
5,315,344	+		Echvi_4443	0.21	-0.9
5,315,345	-		Echvi_4443	0.21	-0.1
5,315,365	+		Echvi_4443	0.22	-1.1
5,315,366	-		Echvi_4443	0.22	-1.0
5,315,380	+		Echvi_4443	0.23	-1.4
5,315,392	+		Echvi_4443	0.24	-0.8
5,315,393	-		Echvi_4443	0.24	+0.1
5,315,411	-		Echvi_4443	0.25	-0.3
5,315,438	+		Echvi_4443	0.27	-1.1
5,315,439	-		Echvi_4443	0.27	+1.7
5,315,442	+		Echvi_4443	0.27	+0.5
5,315,443	-		Echvi_4443	0.27	+0.4
5,315,464	-		Echvi_4443	0.28	+0.7
5,315,528	-		Echvi_4443	0.32	-0.1
5,315,528	-		Echvi_4443	0.32	-0.0
5,315,551	-		Echvi_4443	0.34	-1.5
5,315,551	-		Echvi_4443	0.34	-0.1
5,315,711	-		Echvi_4443	0.44	-1.3
5,315,782	+		Echvi_4443	0.48	+0.4
5,315,782	+		Echvi_4443	0.48	-0.2
5,315,800	+		Echvi_4443	0.49	-1.1
5,315,802	+		Echvi_4443	0.49	-0.5
5,315,803	-		Echvi_4443	0.50	+1.3
5,315,803	-		Echvi_4443	0.50	-1.2
5,315,803	-		Echvi_4443	0.50	+0.4
5,315,803	-		Echvi_4443	0.50	-0.9
5,315,803	-		Echvi_4443	0.50	-1.9
5,315,841	-		Echvi_4443	0.52	+0.3
5,315,871	-		Echvi_4443	0.54	-0.7
5,315,871	-		Echvi_4443	0.54	+0.7
5,315,899	-		Echvi_4443	0.56	+0.5
5,315,909	+		Echvi_4443	0.56	-0.6
5,316,042	-		Echvi_4443	0.65	-0.3
5,316,055	+		Echvi_4443	0.65	-0.2
5,316,055	+		Echvi_4443	0.65	+1.0
5,316,057	+		Echvi_4443	0.66	+0.1
5,316,057	+		Echvi_4443	0.66	-0.1
5,316,057	+		Echvi_4443	0.66	-2.0
5,316,058	-		Echvi_4443	0.66	+2.7
5,316,058	-		Echvi_4443	0.66	-0.7
5,316,058	-		Echvi_4443	0.66	-0.3
5,316,058	-		Echvi_4443	0.66	-1.9
5,316,062	+				+2.3
5,316,063	-		Echvi_4443	0.66	-0.4
5,316,063	-		Echvi_4443	0.66	-0.5
5,316,205	+		Echvi_4443	0.75	-0.5
5,316,206	-		Echvi_4443	0.75	+0.0
5,316,206	-		Echvi_4443	0.75	-0.9
5,316,220	+		Echvi_4443	0.76	-1.0
5,316,253	+		Echvi_4443	0.78	+0.5
5,316,255	+		Echvi_4443	0.78	+0.5
5,316,255	+		Echvi_4443	0.78	-0.1
5,316,256	-		Echvi_4443	0.78	+1.7
5,316,280	+		Echvi_4443	0.80	-1.3
5,316,295	-		Echvi_4443	0.81	-0.2
5,316,380	-		Echvi_4443	0.86	-0.6
5,316,393	-		Echvi_4443	0.87	-1.3
5,316,408	-		Echvi_4443	0.88	+1.3
5,316,417	+		Echvi_4443	0.88	-1.3
5,316,418	-		Echvi_4443	0.88	-1.7
5,316,457	-				-0.6
5,316,463	-				-0.3
5,316,463	-				-0.2
5,316,463	-				+0.4
5,316,481	-				-0.3
5,316,481	-				-1.3
5,316,486	+				+0.5
5,316,486	+				+0.6
5,316,487	-				+0.6
5,316,493	+				-0.2
5,316,494	-				-0.8
5,316,494	-				-1.3
5,316,494	-				-1.1
5,316,494	-				-0.2
5,316,506	-				-0.3
5,316,508	-				-0.5
5,316,508	-				+0.7
5,316,508	-				+0.3
5,316,515	-				-0.3
5,316,517	-				-0.0
5,316,609	+				-1.3
5,316,609	+				-0.2
5,316,705	-				+0.6
5,316,750	-				-0.3
5,316,753	+				+0.4
5,316,757	+				+0.3
5,316,757	+				+0.2
5,316,758	-				-0.1
5,316,784	+				-0.3
5,316,784	+				-1.0
5,316,785	-				+1.2
5,316,789	+				-0.9
5,316,789	+				+1.7
5,316,796	+				+0.6
5,316,837	-				+0.9
5,316,837	-				+0.1
5,316,880	+				+0.6
5,316,890	+				+1.0
5,316,891	-				+0.5
5,316,895	-				-0.1
5,316,945	+		Echvi_4444	0.15	-0.3
5,316,945	+		Echvi_4444	0.15	-1.5
5,316,946	-		Echvi_4444	0.16	+1.0
5,316,946	-		Echvi_4444	0.16	-0.3
5,317,002	+		Echvi_4444	0.31	-0.5
5,317,034	-		Echvi_4444	0.40	-1.6
5,317,108	+		Echvi_4444	0.60	-0.6
5,317,108	+		Echvi_4444	0.60	-0.4
5,317,108	+		Echvi_4444	0.60	+0.1
5,317,108	+		Echvi_4444	0.60	+0.5
5,317,109	-		Echvi_4444	0.60	+0.5
5,317,134	+		Echvi_4444	0.67	-0.6
5,317,134	+		Echvi_4444	0.67	+0.5
5,317,134	+		Echvi_4444	0.67	-0.7
5,317,140	+		Echvi_4444	0.69	-1.6
5,317,154	+		Echvi_4444	0.72	+1.0
5,317,181	+		Echvi_4444	0.80	+0.0
5,317,203	-		Echvi_4444	0.86	+0.3
5,317,203	-		Echvi_4444	0.86	+0.8
5,317,211	+		Echvi_4444	0.88	+0.5
5,317,212	-		Echvi_4444	0.88	-0.8
5,317,212	-		Echvi_4444	0.88	+0.3
5,317,212	-		Echvi_4444	0.88	-0.2
5,317,255	-				+0.2
5,317,258	-				-0.9
5,317,258	-				-0.2
5,317,258	-				+0.2
5,317,288	+				+0.2
5,317,300	+				+0.1
5,317,319	+				-0.5
5,317,319	+				+0.4
5,317,319	+				+0.1
5,317,319	+				-0.5
5,317,319	+				+0.1
5,317,323	+				+0.2
5,317,347	+				-1.2
5,317,376	+				+0.5
5,317,377	-				+0.2
5,317,380	+				+0.7
5,317,380	+				+0.9
5,317,381	-				+0.8
5,317,383	-				+0.1
5,317,386	+				+0.2
5,317,387	-				+0.5
5,317,387	-				+0.4
5,317,393	+				+0.7
5,317,393	+				+0.1
5,317,393	+				+0.3
5,317,431	+				+0.2
5,317,432	-				+0.2
5,317,445	+				+0.7
5,317,449	+				-0.1
5,317,454	-				+0.9
5,317,454	-				+2.2
5,317,467	+				-0.5
5,317,481	+				-0.1
5,317,530	-				-1.4
5,317,534	+				+0.5
5,317,593	+				-0.8