Experiment: m.b. benzoic 0.58 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4317 and Echvi_4318 are separated by 217 nucleotides Echvi_4318 and Echvi_4319 are separated by 130 nucleotides
Echvi_4317: Echvi_4317 - TonB-linked outer membrane protein, SusC/RagA family, at 5,156,041 to 5,159,124
_4317
Echvi_4318: Echvi_4318 - Transcriptional regulators, at 5,159,342 to 5,160,367
_4318
Echvi_4319: Echvi_4319 - hypothetical protein, at 5,160,498 to 5,160,911
_4319
Position (kb)
5159
5160
5161 Strain fitness (log2 ratio)
-1
0
1
2 at 5158.406 kb on + strand, within Echvi_4317 at 5158.406 kb on + strand, within Echvi_4317 at 5158.464 kb on + strand, within Echvi_4317 at 5158.549 kb on + strand, within Echvi_4317 at 5158.553 kb on + strand, within Echvi_4317 at 5158.553 kb on + strand, within Echvi_4317 at 5158.554 kb on - strand, within Echvi_4317 at 5158.554 kb on - strand, within Echvi_4317 at 5158.554 kb on - strand, within Echvi_4317 at 5159.105 kb on + strand at 5159.105 kb on + strand at 5159.105 kb on + strand at 5159.271 kb on - strand at 5159.359 kb on + strand at 5159.489 kb on - strand, within Echvi_4318 at 5159.533 kb on + strand, within Echvi_4318 at 5159.534 kb on - strand, within Echvi_4318 at 5159.621 kb on + strand, within Echvi_4318 at 5159.629 kb on - strand, within Echvi_4318 at 5159.695 kb on + strand, within Echvi_4318 at 5159.696 kb on - strand, within Echvi_4318 at 5159.742 kb on + strand, within Echvi_4318 at 5159.742 kb on + strand, within Echvi_4318 at 5159.743 kb on - strand, within Echvi_4318 at 5159.743 kb on - strand, within Echvi_4318 at 5159.743 kb on - strand, within Echvi_4318 at 5159.785 kb on - strand, within Echvi_4318 at 5159.903 kb on - strand, within Echvi_4318 at 5159.953 kb on + strand, within Echvi_4318 at 5159.953 kb on + strand, within Echvi_4318 at 5160.019 kb on + strand, within Echvi_4318 at 5160.019 kb on + strand, within Echvi_4318 at 5160.023 kb on + strand, within Echvi_4318 at 5160.023 kb on + strand, within Echvi_4318 at 5160.024 kb on - strand, within Echvi_4318 at 5160.036 kb on + strand, within Echvi_4318 at 5160.036 kb on + strand, within Echvi_4318 at 5160.037 kb on - strand, within Echvi_4318 at 5160.204 kb on + strand, within Echvi_4318 at 5160.205 kb on - strand, within Echvi_4318 at 5160.328 kb on - strand at 5160.328 kb on - strand at 5160.383 kb on - strand at 5160.434 kb on + strand at 5160.434 kb on + strand at 5160.435 kb on - strand at 5160.436 kb on + strand at 5160.445 kb on - strand at 5160.504 kb on + strand at 5160.504 kb on + strand at 5160.504 kb on + strand at 5160.528 kb on - strand at 5160.531 kb on - strand at 5160.562 kb on + strand, within Echvi_4319 at 5160.562 kb on + strand, within Echvi_4319 at 5160.562 kb on + strand, within Echvi_4319 at 5160.562 kb on + strand, within Echvi_4319 at 5160.562 kb on + strand, within Echvi_4319 at 5160.563 kb on - strand, within Echvi_4319 at 5160.620 kb on + strand, within Echvi_4319 at 5160.621 kb on - strand, within Echvi_4319 at 5160.621 kb on - strand, within Echvi_4319 at 5160.628 kb on - strand, within Echvi_4319 at 5160.730 kb on + strand, within Echvi_4319 at 5160.730 kb on + strand, within Echvi_4319 at 5160.730 kb on + strand, within Echvi_4319 at 5160.730 kb on + strand, within Echvi_4319 at 5160.730 kb on + strand, within Echvi_4319 at 5160.731 kb on - strand, within Echvi_4319 at 5160.731 kb on - strand, within Echvi_4319 at 5160.734 kb on + strand, within Echvi_4319 at 5160.735 kb on - strand, within Echvi_4319 at 5160.735 kb on - strand, within Echvi_4319 at 5160.748 kb on - strand, within Echvi_4319 at 5160.846 kb on - strand, within Echvi_4319 at 5160.846 kb on - strand, within Echvi_4319 at 5160.897 kb on - strand at 5160.914 kb on - strand at 5160.914 kb on - strand at 5160.914 kb on - strand at 5160.965 kb on - strand at 5160.984 kb on + strand at 5160.984 kb on + strand at 5160.984 kb on + strand at 5160.984 kb on + strand at 5160.984 kb on + strand at 5160.984 kb on + strand at 5160.984 kb on + strand at 5160.985 kb on - strand at 5160.985 kb on - strand at 5161.081 kb on + strand at 5161.155 kb on + strand at 5161.225 kb on + strand at 5161.241 kb on + strand at 5161.242 kb on - strand at 5161.301 kb on + strand at 5161.320 kb on + strand at 5161.320 kb on + strand at 5161.320 kb on + strand at 5161.321 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.58 mg/ml remove 5,158,406 + Echvi_4317 0.77 +0.5 5,158,406 + Echvi_4317 0.77 -0.9 5,158,464 + Echvi_4317 0.79 +0.1 5,158,549 + Echvi_4317 0.81 -1.0 5,158,553 + Echvi_4317 0.81 -0.4 5,158,553 + Echvi_4317 0.81 +0.2 5,158,554 - Echvi_4317 0.81 -0.3 5,158,554 - Echvi_4317 0.81 -1.5 5,158,554 - Echvi_4317 0.81 -1.1 5,159,105 + +0.5 5,159,105 + -0.7 5,159,105 + -0.5 5,159,271 - -0.0 5,159,359 + +0.7 5,159,489 - Echvi_4318 0.14 +0.3 5,159,533 + Echvi_4318 0.19 -0.0 5,159,534 - Echvi_4318 0.19 -0.3 5,159,621 + Echvi_4318 0.27 -1.4 5,159,629 - Echvi_4318 0.28 +0.1 5,159,695 + Echvi_4318 0.34 +1.0 5,159,696 - Echvi_4318 0.35 +2.5 5,159,742 + Echvi_4318 0.39 +0.5 5,159,742 + Echvi_4318 0.39 -0.1 5,159,743 - Echvi_4318 0.39 -0.6 5,159,743 - Echvi_4318 0.39 -1.3 5,159,743 - Echvi_4318 0.39 +0.6 5,159,785 - Echvi_4318 0.43 +0.1 5,159,903 - Echvi_4318 0.55 +0.1 5,159,953 + Echvi_4318 0.60 +0.7 5,159,953 + Echvi_4318 0.60 +0.1 5,160,019 + Echvi_4318 0.66 +0.1 5,160,019 + Echvi_4318 0.66 -0.8 5,160,023 + Echvi_4318 0.66 +0.5 5,160,023 + Echvi_4318 0.66 -0.2 5,160,024 - Echvi_4318 0.66 -0.4 5,160,036 + Echvi_4318 0.68 -0.3 5,160,036 + Echvi_4318 0.68 -0.9 5,160,037 - Echvi_4318 0.68 +0.1 5,160,204 + Echvi_4318 0.84 +0.3 5,160,205 - Echvi_4318 0.84 +0.7 5,160,328 - +0.2 5,160,328 - -0.2 5,160,383 - -0.5 5,160,434 + +1.2 5,160,434 + -0.1 5,160,435 - +0.5 5,160,436 + +0.4 5,160,445 - +0.3 5,160,504 + +0.5 5,160,504 + +1.9 5,160,504 + +1.7 5,160,528 - -1.0 5,160,531 - -0.2 5,160,562 + Echvi_4319 0.15 +0.7 5,160,562 + Echvi_4319 0.15 +0.1 5,160,562 + Echvi_4319 0.15 +0.7 5,160,562 + Echvi_4319 0.15 -0.9 5,160,562 + Echvi_4319 0.15 -1.1 5,160,563 - Echvi_4319 0.16 +0.5 5,160,620 + Echvi_4319 0.29 +0.8 5,160,621 - Echvi_4319 0.30 +0.5 5,160,621 - Echvi_4319 0.30 -0.0 5,160,628 - Echvi_4319 0.31 -0.4 5,160,730 + Echvi_4319 0.56 +0.5 5,160,730 + Echvi_4319 0.56 -0.5 5,160,730 + Echvi_4319 0.56 +0.1 5,160,730 + Echvi_4319 0.56 +1.1 5,160,730 + Echvi_4319 0.56 +1.7 5,160,731 - Echvi_4319 0.56 +0.3 5,160,731 - Echvi_4319 0.56 +1.1 5,160,734 + Echvi_4319 0.57 +0.1 5,160,735 - Echvi_4319 0.57 +0.7 5,160,735 - Echvi_4319 0.57 -0.6 5,160,748 - Echvi_4319 0.60 -0.4 5,160,846 - Echvi_4319 0.84 -0.4 5,160,846 - Echvi_4319 0.84 +1.0 5,160,897 - -0.9 5,160,914 - +0.7 5,160,914 - -0.9 5,160,914 - -0.3 5,160,965 - +0.7 5,160,984 + -0.6 5,160,984 + +0.3 5,160,984 + +0.7 5,160,984 + +0.1 5,160,984 + -1.0 5,160,984 + -0.7 5,160,984 + -0.2 5,160,985 - +0.3 5,160,985 - -0.6 5,161,081 + +0.4 5,161,155 + -1.6 5,161,225 + +0.7 5,161,241 + -1.4 5,161,242 - +1.2 5,161,301 + +0.8 5,161,320 + -1.3 5,161,320 + -0.2 5,161,320 + -1.1 5,161,321 - +0.1
Or see this region's nucleotide sequence