Experiment: m.b. benzoic 0.58 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2213 and Echvi_2214 are separated by 79 nucleotides Echvi_2214 and Echvi_2215 are separated by 83 nucleotides Echvi_2215 and Echvi_2216 overlap by 13 nucleotides Echvi_2216 and Echvi_2217 are separated by 4 nucleotides
Echvi_2213: Echvi_2213 - TIGR02757 family protein, at 2,640,503 to 2,641,270
_2213
Echvi_2214: Echvi_2214 - orotate phosphoribosyltransferase, at 2,641,350 to 2,641,997
_2214
Echvi_2215: Echvi_2215 - ADP-ribose pyrophosphatase, at 2,642,081 to 2,642,767
_2215
Echvi_2216: Echvi_2216 - pantetheine-phosphate adenylyltransferase, bacterial, at 2,642,755 to 2,643,210
_2216
Echvi_2217: Echvi_2217 - hypothetical protein, at 2,643,215 to 2,644,048
_2217
Position (kb)
2642
2643 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2641.114 kb on - strand, within Echvi_2213 at 2641.212 kb on + strand at 2641.213 kb on - strand at 2641.351 kb on + strand at 2642.016 kb on - strand at 2642.163 kb on - strand, within Echvi_2215 at 2642.163 kb on - strand, within Echvi_2215 at 2642.218 kb on + strand, within Echvi_2215 at 2642.230 kb on + strand, within Echvi_2215 at 2642.230 kb on + strand, within Echvi_2215 at 2642.236 kb on + strand, within Echvi_2215 at 2642.239 kb on + strand, within Echvi_2215 at 2642.255 kb on + strand, within Echvi_2215 at 2642.256 kb on - strand, within Echvi_2215 at 2642.301 kb on + strand, within Echvi_2215 at 2642.302 kb on - strand, within Echvi_2215 at 2642.302 kb on - strand, within Echvi_2215 at 2642.302 kb on - strand, within Echvi_2215 at 2642.350 kb on + strand, within Echvi_2215 at 2642.351 kb on - strand, within Echvi_2215 at 2642.353 kb on + strand, within Echvi_2215 at 2642.353 kb on + strand, within Echvi_2215 at 2642.545 kb on + strand, within Echvi_2215 at 2642.549 kb on + strand, within Echvi_2215 at 2642.549 kb on + strand, within Echvi_2215 at 2642.549 kb on + strand, within Echvi_2215 at 2642.549 kb on + strand, within Echvi_2215 at 2642.550 kb on - strand, within Echvi_2215 at 2642.550 kb on - strand, within Echvi_2215 at 2642.550 kb on - strand, within Echvi_2215 at 2642.586 kb on - strand, within Echvi_2215 at 2642.605 kb on + strand, within Echvi_2215 at 2642.653 kb on + strand, within Echvi_2215 at 2642.685 kb on + strand, within Echvi_2215 at 2642.717 kb on + strand at 2642.718 kb on - strand at 2643.217 kb on - strand at 2643.430 kb on - strand, within Echvi_2217 at 2643.456 kb on - strand, within Echvi_2217 at 2643.606 kb on - strand, within Echvi_2217 at 2643.700 kb on - strand, within Echvi_2217 at 2643.742 kb on - strand, within Echvi_2217
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.58 mg/ml remove 2,641,114 - Echvi_2213 0.80 -0.4 2,641,212 + -1.4 2,641,213 - +0.6 2,641,351 + -0.7 2,642,016 - +0.7 2,642,163 - Echvi_2215 0.12 -0.4 2,642,163 - Echvi_2215 0.12 -1.2 2,642,218 + Echvi_2215 0.20 -1.4 2,642,230 + Echvi_2215 0.22 -1.2 2,642,230 + Echvi_2215 0.22 +0.3 2,642,236 + Echvi_2215 0.23 +0.4 2,642,239 + Echvi_2215 0.23 -1.3 2,642,255 + Echvi_2215 0.25 +3.2 2,642,256 - Echvi_2215 0.25 +0.5 2,642,301 + Echvi_2215 0.32 -0.8 2,642,302 - Echvi_2215 0.32 -0.9 2,642,302 - Echvi_2215 0.32 -1.6 2,642,302 - Echvi_2215 0.32 -0.5 2,642,350 + Echvi_2215 0.39 -1.1 2,642,351 - Echvi_2215 0.39 -0.1 2,642,353 + Echvi_2215 0.40 -2.1 2,642,353 + Echvi_2215 0.40 -2.5 2,642,545 + Echvi_2215 0.68 +0.7 2,642,549 + Echvi_2215 0.68 -0.4 2,642,549 + Echvi_2215 0.68 -1.6 2,642,549 + Echvi_2215 0.68 +0.9 2,642,549 + Echvi_2215 0.68 +0.1 2,642,550 - Echvi_2215 0.68 -1.5 2,642,550 - Echvi_2215 0.68 -0.3 2,642,550 - Echvi_2215 0.68 -0.3 2,642,586 - Echvi_2215 0.74 -0.5 2,642,605 + Echvi_2215 0.76 -0.7 2,642,653 + Echvi_2215 0.83 +1.1 2,642,685 + Echvi_2215 0.88 -0.5 2,642,717 + -0.6 2,642,718 - +0.7 2,643,217 - -0.8 2,643,430 - Echvi_2217 0.26 -1.2 2,643,456 - Echvi_2217 0.29 -0.7 2,643,606 - Echvi_2217 0.47 +1.2 2,643,700 - Echvi_2217 0.58 +1.6 2,643,742 - Echvi_2217 0.63 -0.8
Or see this region's nucleotide sequence