Experiment: m.b. benzoic 0.58 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2202 and Echvi_2203 are separated by 4 nucleotides Echvi_2203 and Echvi_2204 are separated by 134 nucleotides
Echvi_2202: Echvi_2202 - branched-chain amino acid aminotransferase, group II, at 2,629,150 to 2,630,217
_2202
Echvi_2203: Echvi_2203 - ATP:cob(I)alamin adenosyltransferase, at 2,630,222 to 2,630,770
_2203
Echvi_2204: Echvi_2204 - ABC-type antimicrobial peptide transport system, ATPase component, at 2,630,905 to 2,631,627
_2204
Position (kb)
2630
2631 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2629.290 kb on - strand, within Echvi_2202 at 2629.471 kb on - strand, within Echvi_2202 at 2629.561 kb on + strand, within Echvi_2202 at 2629.671 kb on - strand, within Echvi_2202 at 2629.681 kb on + strand, within Echvi_2202 at 2629.737 kb on + strand, within Echvi_2202 at 2629.744 kb on - strand, within Echvi_2202 at 2629.761 kb on + strand, within Echvi_2202 at 2629.772 kb on + strand, within Echvi_2202 at 2629.773 kb on - strand, within Echvi_2202 at 2629.773 kb on - strand, within Echvi_2202 at 2629.773 kb on - strand, within Echvi_2202 at 2629.792 kb on - strand, within Echvi_2202 at 2629.805 kb on + strand, within Echvi_2202 at 2629.864 kb on + strand, within Echvi_2202 at 2629.879 kb on + strand, within Echvi_2202 at 2629.959 kb on + strand, within Echvi_2202 at 2629.960 kb on - strand, within Echvi_2202 at 2629.960 kb on - strand, within Echvi_2202 at 2629.960 kb on - strand, within Echvi_2202 at 2629.960 kb on - strand, within Echvi_2202 at 2629.960 kb on - strand, within Echvi_2202 at 2629.963 kb on + strand, within Echvi_2202 at 2629.964 kb on - strand, within Echvi_2202 at 2629.971 kb on + strand, within Echvi_2202 at 2629.971 kb on + strand, within Echvi_2202 at 2629.972 kb on - strand, within Echvi_2202 at 2629.985 kb on + strand, within Echvi_2202 at 2630.128 kb on + strand at 2630.129 kb on - strand at 2630.203 kb on + strand at 2630.221 kb on - strand at 2630.252 kb on + strand at 2630.258 kb on + strand at 2630.258 kb on + strand at 2630.258 kb on + strand at 2630.264 kb on + strand at 2630.286 kb on - strand, within Echvi_2203 at 2630.296 kb on - strand, within Echvi_2203 at 2630.317 kb on - strand, within Echvi_2203 at 2630.332 kb on + strand, within Echvi_2203 at 2630.409 kb on + strand, within Echvi_2203 at 2630.438 kb on + strand, within Echvi_2203 at 2630.460 kb on - strand, within Echvi_2203 at 2630.563 kb on + strand, within Echvi_2203 at 2630.576 kb on - strand, within Echvi_2203 at 2630.760 kb on + strand at 2630.761 kb on - strand at 2630.853 kb on - strand at 2630.853 kb on - strand at 2630.894 kb on + strand at 2630.903 kb on + strand at 2630.906 kb on + strand at 2630.981 kb on - strand, within Echvi_2204 at 2631.002 kb on + strand, within Echvi_2204 at 2631.003 kb on - strand, within Echvi_2204 at 2631.036 kb on + strand, within Echvi_2204 at 2631.036 kb on + strand, within Echvi_2204 at 2631.037 kb on - strand, within Echvi_2204 at 2631.037 kb on - strand, within Echvi_2204 at 2631.081 kb on + strand, within Echvi_2204 at 2631.114 kb on + strand, within Echvi_2204 at 2631.132 kb on + strand, within Echvi_2204 at 2631.136 kb on - strand, within Echvi_2204 at 2631.148 kb on + strand, within Echvi_2204 at 2631.291 kb on - strand, within Echvi_2204 at 2631.428 kb on - strand, within Echvi_2204 at 2631.434 kb on + strand, within Echvi_2204 at 2631.435 kb on - strand, within Echvi_2204 at 2631.435 kb on - strand, within Echvi_2204 at 2631.521 kb on + strand, within Echvi_2204 at 2631.522 kb on - strand, within Echvi_2204 at 2631.522 kb on - strand, within Echvi_2204 at 2631.541 kb on + strand, within Echvi_2204 at 2631.541 kb on + strand, within Echvi_2204 at 2631.541 kb on + strand, within Echvi_2204 at 2631.541 kb on + strand, within Echvi_2204 at 2631.541 kb on + strand, within Echvi_2204 at 2631.541 kb on + strand, within Echvi_2204 at 2631.542 kb on - strand, within Echvi_2204 at 2631.542 kb on - strand, within Echvi_2204 at 2631.542 kb on - strand, within Echvi_2204 at 2631.542 kb on - strand, within Echvi_2204 at 2631.542 kb on - strand, within Echvi_2204 at 2631.542 kb on - strand, within Echvi_2204 at 2631.542 kb on - strand, within Echvi_2204 at 2631.544 kb on - strand, within Echvi_2204 at 2631.544 kb on - strand, within Echvi_2204 at 2631.588 kb on - strand at 2631.681 kb on - strand at 2631.696 kb on + strand at 2631.706 kb on - strand at 2631.723 kb on + strand at 2631.724 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.58 mg/ml remove 2,629,290 - Echvi_2202 0.13 -1.0 2,629,471 - Echvi_2202 0.30 +0.5 2,629,561 + Echvi_2202 0.38 +0.3 2,629,671 - Echvi_2202 0.49 -1.8 2,629,681 + Echvi_2202 0.50 -0.7 2,629,737 + Echvi_2202 0.55 -1.7 2,629,744 - Echvi_2202 0.56 +0.2 2,629,761 + Echvi_2202 0.57 -0.6 2,629,772 + Echvi_2202 0.58 -2.0 2,629,773 - Echvi_2202 0.58 -0.5 2,629,773 - Echvi_2202 0.58 -0.1 2,629,773 - Echvi_2202 0.58 +1.3 2,629,792 - Echvi_2202 0.60 +2.7 2,629,805 + Echvi_2202 0.61 +0.4 2,629,864 + Echvi_2202 0.67 +0.4 2,629,879 + Echvi_2202 0.68 -0.0 2,629,959 + Echvi_2202 0.76 -1.1 2,629,960 - Echvi_2202 0.76 +0.7 2,629,960 - Echvi_2202 0.76 +0.1 2,629,960 - Echvi_2202 0.76 +0.1 2,629,960 - Echvi_2202 0.76 -0.7 2,629,960 - Echvi_2202 0.76 +0.5 2,629,963 + Echvi_2202 0.76 -1.4 2,629,964 - Echvi_2202 0.76 -0.1 2,629,971 + Echvi_2202 0.77 +0.7 2,629,971 + Echvi_2202 0.77 -1.1 2,629,972 - Echvi_2202 0.77 -0.2 2,629,985 + Echvi_2202 0.78 -0.1 2,630,128 + -0.4 2,630,129 - -0.7 2,630,203 + +0.7 2,630,221 - +0.2 2,630,252 + +1.1 2,630,258 + -1.1 2,630,258 + -0.5 2,630,258 + +0.3 2,630,264 + +0.3 2,630,286 - Echvi_2203 0.12 -1.1 2,630,296 - Echvi_2203 0.13 -1.6 2,630,317 - Echvi_2203 0.17 +0.4 2,630,332 + Echvi_2203 0.20 +0.5 2,630,409 + Echvi_2203 0.34 -0.9 2,630,438 + Echvi_2203 0.39 +0.1 2,630,460 - Echvi_2203 0.43 -0.5 2,630,563 + Echvi_2203 0.62 +0.2 2,630,576 - Echvi_2203 0.64 -1.6 2,630,760 + +0.9 2,630,761 - -0.6 2,630,853 - +0.7 2,630,853 - -0.7 2,630,894 + -0.2 2,630,903 + +1.5 2,630,906 + +0.7 2,630,981 - Echvi_2204 0.11 +0.1 2,631,002 + Echvi_2204 0.13 -0.0 2,631,003 - Echvi_2204 0.14 -0.3 2,631,036 + Echvi_2204 0.18 -0.1 2,631,036 + Echvi_2204 0.18 -0.7 2,631,037 - Echvi_2204 0.18 -3.3 2,631,037 - Echvi_2204 0.18 +0.4 2,631,081 + Echvi_2204 0.24 -0.3 2,631,114 + Echvi_2204 0.29 -2.7 2,631,132 + Echvi_2204 0.31 +0.5 2,631,136 - Echvi_2204 0.32 +0.3 2,631,148 + Echvi_2204 0.34 +0.1 2,631,291 - Echvi_2204 0.53 +0.0 2,631,428 - Echvi_2204 0.72 -0.0 2,631,434 + Echvi_2204 0.73 -2.5 2,631,435 - Echvi_2204 0.73 +0.1 2,631,435 - Echvi_2204 0.73 -0.3 2,631,521 + Echvi_2204 0.85 +0.0 2,631,522 - Echvi_2204 0.85 +0.7 2,631,522 - Echvi_2204 0.85 -1.2 2,631,541 + Echvi_2204 0.88 -0.7 2,631,541 + Echvi_2204 0.88 +0.2 2,631,541 + Echvi_2204 0.88 +0.4 2,631,541 + Echvi_2204 0.88 +0.2 2,631,541 + Echvi_2204 0.88 +1.3 2,631,541 + Echvi_2204 0.88 +0.1 2,631,542 - Echvi_2204 0.88 -0.1 2,631,542 - Echvi_2204 0.88 +0.0 2,631,542 - Echvi_2204 0.88 +0.6 2,631,542 - Echvi_2204 0.88 -0.0 2,631,542 - Echvi_2204 0.88 -1.3 2,631,542 - Echvi_2204 0.88 -0.7 2,631,542 - Echvi_2204 0.88 +1.2 2,631,544 - Echvi_2204 0.88 -0.2 2,631,544 - Echvi_2204 0.88 +1.0 2,631,588 - +0.3 2,631,681 - +0.2 2,631,696 + +0.1 2,631,706 - +2.2 2,631,723 + +0.4 2,631,724 - -0.9
Or see this region's nucleotide sequence