Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0824

Experiment: m.b. benzoic 0.58 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. benzoic 0.58 mg/ml
940,971	+		Echvi_0823	0.43	-0.2
940,971	+		Echvi_0823	0.43	-0.6
940,971	+		Echvi_0823	0.43	+2.0
940,984	-		Echvi_0823	0.44	-2.0
941,044	+		Echvi_0823	0.47	-0.5
941,045	-		Echvi_0823	0.47	-1.6
941,045	-		Echvi_0823	0.47	-2.1
941,045	-		Echvi_0823	0.47	-0.1
941,045	-		Echvi_0823	0.47	-1.0
941,045	-		Echvi_0823	0.47	-1.9
941,045	-		Echvi_0823	0.47	-0.2
941,045	-		Echvi_0823	0.47	-1.0
941,045	-		Echvi_0823	0.47	+0.4
941,054	+		Echvi_0823	0.48	+0.7
941,204	+		Echvi_0823	0.56	+0.4
941,205	-		Echvi_0823	0.56	-1.3
941,212	+		Echvi_0823	0.57	+0.4
941,212	+		Echvi_0823	0.57	+2.8
941,213	-		Echvi_0823	0.57	-1.1
941,217	+		Echvi_0823	0.57	-0.3
941,218	-		Echvi_0823	0.57	-1.1
941,314	+		Echvi_0823	0.63	-1.1
941,317	+		Echvi_0823	0.63	-0.9
941,346	+		Echvi_0823	0.65	-0.5
941,347	-		Echvi_0823	0.65	-1.2
941,347	-		Echvi_0823	0.65	+1.4
941,433	-		Echvi_0823	0.70	-0.5
941,538	+		Echvi_0823	0.76	-0.8
941,597	+		Echvi_0823	0.79	-0.8
941,624	+		Echvi_0823	0.81	+0.6
941,624	+		Echvi_0823	0.81	+0.2
941,625	-		Echvi_0823	0.81	+0.1
941,625	-		Echvi_0823	0.81	+0.4
941,625	-		Echvi_0823	0.81	-1.4
941,625	-		Echvi_0823	0.81	-0.9
941,625	-		Echvi_0823	0.81	-0.2
941,655	+		Echvi_0823	0.83	-0.9
941,657	+		Echvi_0823	0.83	-1.2
941,657	+				+1.8
941,657	+		Echvi_0823	0.83	-1.9
941,657	+		Echvi_0823	0.83	-0.5
941,658	-		Echvi_0823	0.83	-0.5
941,658	-		Echvi_0823	0.83	-1.6
941,658	-		Echvi_0823	0.83	+0.1
941,658	-		Echvi_0823	0.83	-1.0
941,658	-		Echvi_0823	0.83	+0.2
941,670	+		Echvi_0823	0.83	-0.7
941,723	+		Echvi_0823	0.86	-0.5
941,724	-		Echvi_0823	0.87	-0.9
941,724	-		Echvi_0823	0.87	-0.4
941,724	-		Echvi_0823	0.87	-0.7
941,724	-		Echvi_0823	0.87	-0.6
941,726	-		Echvi_0823	0.87	-1.2
941,726	-		Echvi_0823	0.87	-0.4
941,828	+				+0.8
941,829	-				+0.8
941,912	-				-0.4
941,955	-				-0.2
941,955	-				-0.8
941,960	+				+0.5
941,961	-				+1.2
941,961	-				-0.3
941,974	-				-0.8
942,064	-		Echvi_0824	0.10	-0.1
942,256	+		Echvi_0824	0.30	-0.8
942,256	+		Echvi_0824	0.30	+1.8
942,262	-		Echvi_0824	0.31	+2.2
942,267	-		Echvi_0824	0.31	-0.7
942,267	-		Echvi_0824	0.31	+2.4
942,273	+		Echvi_0824	0.32	-0.7
942,356	+		Echvi_0824	0.41	+0.7
942,357	-		Echvi_0824	0.41	-0.5
942,453	+		Echvi_0824	0.51	-0.6
942,453	+		Echvi_0824	0.51	-0.3
942,453	+		Echvi_0824	0.51	-0.1
942,566	+		Echvi_0824	0.63	-0.2
942,581	-		Echvi_0824	0.64	-1.1
942,623	+		Echvi_0824	0.69	+0.2
942,624	-		Echvi_0824	0.69	-0.7
942,624	-		Echvi_0824	0.69	+0.0
942,624	-		Echvi_0824	0.69	+0.6
942,624	-		Echvi_0824	0.69	-0.6
942,677	+		Echvi_0824	0.74	-0.8
942,678	-		Echvi_0824	0.74	-0.8
942,678	-		Echvi_0824	0.74	-1.1
942,683	+		Echvi_0824	0.75	-1.4
942,779	+		Echvi_0824	0.85	+0.1
942,780	-		Echvi_0824	0.85	-0.8
942,780	-		Echvi_0824	0.85	-1.5
942,780	-		Echvi_0824	0.85	-0.9
942,783	+		Echvi_0824	0.85	-0.8
942,784	-		Echvi_0824	0.85	+0.3
942,784	-		Echvi_0824	0.85	-0.2
942,852	-				-2.3
942,963	+				-0.5
942,963	+				-0.7
942,963	+				-0.1
942,963	+				+0.0
942,963	+				-0.1
942,963	+				+0.1
942,963	+				+0.1
942,963	+				+0.6
942,964	-				-1.5
942,964	-				+0.3
942,964	-				-3.3
942,964	-				-0.6
942,964	-				-1.0
942,964	-				-1.8
942,965	+				+0.1
942,972	-				-1.0
942,972	-				-1.1
942,972	-				-2.8
943,029	+				-0.5
943,030	-				-1.6
943,030	-				+0.5
943,030	-				-1.1
943,030	-				+0.1
943,030	-				-1.4
943,030	-				-0.6
943,278	+		Echvi_0825	0.30	+0.8
943,531	+		Echvi_0825	0.54	-1.0
943,632	-		Echvi_0825	0.64	-1.5
943,749	+		Echvi_0825	0.75	-0.8