Experiment: m.b. benzoic 0.58 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0819 and Echvi_0820 are separated by 116 nucleotides Echvi_0820 and Echvi_0821 are separated by 71 nucleotides Echvi_0821 and Echvi_0822 are separated by 6 nucleotides
Echvi_0819: Echvi_0819 - Predicted signal-transduction protein containing cAMP-binding and CBS domains, at 937,141 to 937,662
_0819
Echvi_0820: Echvi_0820 - Membrane transporters of cations and cationic drugs, at 937,779 to 938,108
_0820
Echvi_0821: Echvi_0821 - Acetyltransferases, at 938,180 to 938,578
_0821
Echvi_0822: Echvi_0822 - Acetyltransferases, at 938,585 to 939,103
_0822
Position (kb) 938
939
940 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 937.585 kb on + strand, within Echvi_0819 at 937.615 kb on + strand at 937.639 kb on + strand at 937.649 kb on + strand at 937.653 kb on + strand at 937.658 kb on - strand at 937.658 kb on - strand at 937.701 kb on - strand at 937.701 kb on - strand at 937.705 kb on - strand at 937.800 kb on - strand at 937.810 kb on + strand at 937.811 kb on - strand at 937.872 kb on + strand, within Echvi_0820 at 937.872 kb on + strand, within Echvi_0820 at 937.872 kb on + strand, within Echvi_0820 at 937.872 kb on + strand, within Echvi_0820 at 937.872 kb on + strand, within Echvi_0820 at 937.872 kb on + strand, within Echvi_0820 at 937.872 kb on + strand, within Echvi_0820 at 937.872 kb on + strand, within Echvi_0820 at 937.872 kb on + strand, within Echvi_0820 at 937.872 kb on + strand, within Echvi_0820 at 937.873 kb on - strand, within Echvi_0820 at 937.873 kb on - strand, within Echvi_0820 at 937.873 kb on - strand, within Echvi_0820 at 937.873 kb on - strand, within Echvi_0820 at 937.873 kb on - strand, within Echvi_0820 at 937.876 kb on + strand, within Echvi_0820 at 937.877 kb on - strand, within Echvi_0820 at 937.914 kb on - strand, within Echvi_0820 at 937.921 kb on + strand, within Echvi_0820 at 937.963 kb on - strand, within Echvi_0820 at 938.015 kb on + strand, within Echvi_0820 at 938.015 kb on + strand, within Echvi_0820 at 938.015 kb on + strand, within Echvi_0820 at 938.016 kb on - strand, within Echvi_0820 at 938.018 kb on - strand, within Echvi_0820 at 938.021 kb on + strand, within Echvi_0820 at 938.021 kb on + strand, within Echvi_0820 at 938.032 kb on + strand, within Echvi_0820 at 938.068 kb on + strand, within Echvi_0820 at 938.069 kb on - strand, within Echvi_0820 at 938.069 kb on - strand, within Echvi_0820 at 938.117 kb on - strand at 938.121 kb on - strand at 938.121 kb on - strand at 938.122 kb on + strand at 938.122 kb on + strand at 938.122 kb on + strand at 938.123 kb on - strand at 938.123 kb on - strand at 938.123 kb on - strand at 938.128 kb on + strand at 938.128 kb on + strand at 938.128 kb on + strand at 938.128 kb on + strand at 938.129 kb on - strand at 938.129 kb on - strand at 938.131 kb on - strand at 938.131 kb on - strand at 938.197 kb on - strand at 938.207 kb on + strand at 938.207 kb on + strand at 938.208 kb on - strand at 938.222 kb on - strand, within Echvi_0821 at 938.239 kb on - strand, within Echvi_0821 at 938.313 kb on + strand, within Echvi_0821 at 938.317 kb on + strand, within Echvi_0821 at 938.317 kb on + strand, within Echvi_0821 at 938.317 kb on + strand, within Echvi_0821 at 938.318 kb on - strand, within Echvi_0821 at 938.318 kb on - strand, within Echvi_0821 at 938.318 kb on - strand, within Echvi_0821 at 938.323 kb on + strand, within Echvi_0821 at 938.323 kb on + strand, within Echvi_0821 at 938.323 kb on + strand, within Echvi_0821 at 938.323 kb on + strand, within Echvi_0821 at 938.324 kb on - strand, within Echvi_0821 at 938.324 kb on - strand, within Echvi_0821 at 938.324 kb on - strand, within Echvi_0821 at 938.327 kb on + strand, within Echvi_0821 at 938.327 kb on + strand, within Echvi_0821 at 938.331 kb on - strand, within Echvi_0821 at 938.331 kb on - strand, within Echvi_0821 at 938.331 kb on - strand, within Echvi_0821 at 938.343 kb on - strand, within Echvi_0821 at 938.344 kb on + strand, within Echvi_0821 at 938.344 kb on + strand, within Echvi_0821 at 938.344 kb on + strand, within Echvi_0821 at 938.344 kb on + strand, within Echvi_0821 at 938.345 kb on - strand, within Echvi_0821 at 938.468 kb on - strand, within Echvi_0821 at 938.468 kb on - strand, within Echvi_0821 at 938.519 kb on + strand, within Echvi_0821 at 938.520 kb on - strand, within Echvi_0821 at 938.561 kb on + strand at 938.562 kb on - strand at 938.572 kb on + strand at 938.596 kb on - strand at 938.644 kb on + strand, within Echvi_0822 at 938.723 kb on - strand, within Echvi_0822 at 938.732 kb on - strand, within Echvi_0822 at 938.748 kb on - strand, within Echvi_0822 at 938.808 kb on + strand, within Echvi_0822 at 938.877 kb on - strand, within Echvi_0822 at 938.963 kb on + strand, within Echvi_0822 at 938.966 kb on - strand, within Echvi_0822 at 939.002 kb on - strand, within Echvi_0822 at 939.041 kb on - strand, within Echvi_0822 at 939.080 kb on - strand at 939.080 kb on - strand at 939.094 kb on - strand at 939.159 kb on - strand at 939.167 kb on - strand at 939.167 kb on - strand at 939.175 kb on + strand at 939.234 kb on + strand at 939.235 kb on - strand at 939.236 kb on + strand at 939.236 kb on + strand at 939.236 kb on + strand at 939.236 kb on + strand at 939.236 kb on + strand at 939.296 kb on + strand at 939.296 kb on + strand at 939.296 kb on + strand at 939.329 kb on - strand at 939.427 kb on + strand at 939.478 kb on + strand at 939.478 kb on + strand at 939.478 kb on + strand at 939.479 kb on - strand at 939.479 kb on - strand at 939.481 kb on - strand at 939.481 kb on - strand at 939.508 kb on + strand at 939.569 kb on + strand at 939.569 kb on + strand at 939.570 kb on - strand at 939.574 kb on + strand at 939.609 kb on + strand at 939.612 kb on + strand at 939.612 kb on + strand at 939.724 kb on + strand at 939.724 kb on + strand at 939.763 kb on + strand at 939.763 kb on + strand at 939.764 kb on - strand at 939.764 kb on - strand at 939.764 kb on - strand at 939.819 kb on + strand at 939.820 kb on - strand at 939.871 kb on + strand at 939.871 kb on + strand at 939.988 kb on + strand at 939.988 kb on + strand at 939.989 kb on - strand at 940.087 kb on - strand at 940.097 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.58 mg/ml remove 937,585 + Echvi_0819 0.85 -0.9 937,615 + -1.2 937,639 + -0.2 937,649 + +0.7 937,653 + +0.0 937,658 - -1.4 937,658 - -0.3 937,701 - -0.3 937,701 - -0.5 937,705 - -0.4 937,800 - -2.1 937,810 + +0.2 937,811 - -0.3 937,872 + Echvi_0820 0.28 +0.2 937,872 + Echvi_0820 0.28 -0.6 937,872 + Echvi_0820 0.28 -0.4 937,872 + Echvi_0820 0.28 +0.6 937,872 + Echvi_0820 0.28 +1.1 937,872 + Echvi_0820 0.28 +1.3 937,872 + Echvi_0820 0.28 -1.2 937,872 + Echvi_0820 0.28 -0.8 937,872 + Echvi_0820 0.28 -0.3 937,872 + Echvi_0820 0.28 -1.9 937,873 - Echvi_0820 0.28 -1.8 937,873 - Echvi_0820 0.28 -0.0 937,873 - Echvi_0820 0.28 -2.5 937,873 - Echvi_0820 0.28 -1.0 937,873 - Echvi_0820 0.28 -1.6 937,876 + Echvi_0820 0.29 -0.9 937,877 - Echvi_0820 0.30 -1.7 937,914 - Echvi_0820 0.41 +0.8 937,921 + Echvi_0820 0.43 +1.0 937,963 - Echvi_0820 0.56 -1.5 938,015 + Echvi_0820 0.72 +0.2 938,015 + Echvi_0820 0.72 +1.1 938,015 + Echvi_0820 0.72 -0.5 938,016 - Echvi_0820 0.72 -1.0 938,018 - Echvi_0820 0.72 -1.1 938,021 + Echvi_0820 0.73 +1.1 938,021 + Echvi_0820 0.73 +0.2 938,032 + Echvi_0820 0.77 -0.3 938,068 + Echvi_0820 0.88 +1.8 938,069 - Echvi_0820 0.88 -2.5 938,069 - Echvi_0820 0.88 -0.7 938,117 - -3.1 938,121 - -1.2 938,121 - -2.4 938,122 + +0.1 938,122 + +0.7 938,122 + +1.2 938,123 - -1.4 938,123 - +0.2 938,123 - +0.2 938,128 + -0.6 938,128 + -0.5 938,128 + +0.2 938,128 + -0.2 938,129 - -2.5 938,129 - +0.8 938,131 - -2.2 938,131 - -0.8 938,197 - -2.0 938,207 + -0.2 938,207 + -0.2 938,208 - -0.2 938,222 - Echvi_0821 0.11 -1.3 938,239 - Echvi_0821 0.15 -1.5 938,313 + Echvi_0821 0.33 -0.6 938,317 + Echvi_0821 0.34 -0.1 938,317 + Echvi_0821 0.34 +1.0 938,317 + Echvi_0821 0.34 -0.9 938,318 - Echvi_0821 0.35 -1.5 938,318 - Echvi_0821 0.35 -0.8 938,318 - Echvi_0821 0.35 +0.1 938,323 + Echvi_0821 0.36 +0.9 938,323 + Echvi_0821 0.36 -0.1 938,323 + Echvi_0821 0.36 -0.9 938,323 + Echvi_0821 0.36 -0.9 938,324 - Echvi_0821 0.36 -0.7 938,324 - Echvi_0821 0.36 +1.5 938,324 - Echvi_0821 0.36 -2.3 938,327 + Echvi_0821 0.37 +0.0 938,327 + Echvi_0821 0.37 -1.1 938,331 - Echvi_0821 0.38 -1.1 938,331 - Echvi_0821 0.38 -0.8 938,331 - Echvi_0821 0.38 -1.6 938,343 - Echvi_0821 0.41 -1.6 938,344 + Echvi_0821 0.41 -0.3 938,344 + Echvi_0821 0.41 +0.5 938,344 + Echvi_0821 0.41 -0.2 938,344 + Echvi_0821 0.41 -0.1 938,345 - Echvi_0821 0.41 -1.1 938,468 - Echvi_0821 0.72 -1.2 938,468 - Echvi_0821 0.72 -1.0 938,519 + Echvi_0821 0.85 -1.0 938,520 - Echvi_0821 0.85 -0.3 938,561 + +0.1 938,562 - -1.2 938,572 + -0.1 938,596 - -0.5 938,644 + Echvi_0822 0.11 -0.3 938,723 - Echvi_0822 0.27 -1.1 938,732 - Echvi_0822 0.28 -1.8 938,748 - Echvi_0822 0.31 -0.3 938,808 + Echvi_0822 0.43 -1.0 938,877 - Echvi_0822 0.56 -0.5 938,963 + Echvi_0822 0.73 +0.2 938,966 - Echvi_0822 0.73 +0.1 939,002 - Echvi_0822 0.80 -0.8 939,041 - Echvi_0822 0.88 -2.3 939,080 - -0.3 939,080 - +1.0 939,094 - -1.2 939,159 - -2.0 939,167 - -0.9 939,167 - -1.6 939,175 + -1.4 939,234 + -0.4 939,235 - -2.1 939,236 + -0.8 939,236 + -1.1 939,236 + +2.4 939,236 + -0.7 939,236 + +1.8 939,296 + +1.3 939,296 + -1.2 939,296 + -0.6 939,329 - +0.8 939,427 + -0.3 939,478 + +1.8 939,478 + -0.3 939,478 + +0.0 939,479 - -2.3 939,479 - -1.6 939,481 - -1.2 939,481 - +0.3 939,508 + +0.2 939,569 + -0.4 939,569 + +1.1 939,570 - +1.0 939,574 + -1.3 939,609 + -0.6 939,612 + -2.3 939,612 + -0.3 939,724 + -0.9 939,724 + -1.0 939,763 + +0.5 939,763 + +0.3 939,764 - -1.0 939,764 - -1.4 939,764 - -1.1 939,819 + +1.8 939,820 - -0.7 939,871 + -0.2 939,871 + +0.2 939,988 + -0.5 939,988 + -0.5 939,989 - -1.3 940,087 - -0.8 940,097 - -3.8
Or see this region's nucleotide sequence