Experiment: m.b. benzoic 0.58 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0159 and Echvi_0160 are separated by 172 nucleotides Echvi_0160 and Echvi_0161 are separated by 196 nucleotides
Echvi_0159: Echvi_0159 - Cellulase M and related proteins, at 161,494 to 162,561
_0159
Echvi_0160: Echvi_0160 - Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta), at 162,734 to 164,317
_0160
Echvi_0161: Echvi_0161 - Exopolyphosphatase, at 164,514 to 165,479
_0161
Position (kb) 162
163
164
165 Strain fitness (log2 ratio) -2
-1
0
1
2 at 161.780 kb on + strand, within Echvi_0159 at 161.781 kb on - strand, within Echvi_0159 at 161.781 kb on - strand, within Echvi_0159 at 161.830 kb on - strand, within Echvi_0159 at 161.834 kb on + strand, within Echvi_0159 at 161.834 kb on + strand, within Echvi_0159 at 161.835 kb on - strand, within Echvi_0159 at 161.954 kb on + strand, within Echvi_0159 at 161.954 kb on + strand, within Echvi_0159 at 161.954 kb on + strand, within Echvi_0159 at 161.955 kb on - strand, within Echvi_0159 at 161.955 kb on - strand, within Echvi_0159 at 161.955 kb on - strand, within Echvi_0159 at 161.955 kb on - strand, within Echvi_0159 at 162.015 kb on + strand, within Echvi_0159 at 162.015 kb on - strand, within Echvi_0159 at 162.016 kb on - strand, within Echvi_0159 at 162.016 kb on - strand, within Echvi_0159 at 162.017 kb on + strand, within Echvi_0159 at 162.017 kb on + strand, within Echvi_0159 at 162.018 kb on - strand, within Echvi_0159 at 162.192 kb on + strand, within Echvi_0159 at 162.192 kb on + strand, within Echvi_0159 at 162.246 kb on + strand, within Echvi_0159 at 162.255 kb on + strand, within Echvi_0159 at 162.261 kb on + strand, within Echvi_0159 at 162.261 kb on + strand, within Echvi_0159 at 162.261 kb on + strand, within Echvi_0159 at 162.261 kb on + strand, within Echvi_0159 at 162.317 kb on + strand, within Echvi_0159 at 162.317 kb on + strand, within Echvi_0159 at 162.317 kb on + strand, within Echvi_0159 at 162.318 kb on - strand, within Echvi_0159 at 162.321 kb on + strand, within Echvi_0159 at 162.321 kb on + strand, within Echvi_0159 at 162.321 kb on + strand, within Echvi_0159 at 162.321 kb on + strand, within Echvi_0159 at 162.323 kb on + strand, within Echvi_0159 at 162.324 kb on - strand, within Echvi_0159 at 162.341 kb on + strand, within Echvi_0159 at 162.341 kb on + strand, within Echvi_0159 at 162.431 kb on + strand, within Echvi_0159 at 162.459 kb on - strand at 162.459 kb on - strand at 162.468 kb on + strand at 162.469 kb on - strand at 162.482 kb on - strand at 162.482 kb on - strand at 162.482 kb on - strand at 162.482 kb on - strand at 162.531 kb on - strand at 162.531 kb on - strand at 162.570 kb on + strand at 162.570 kb on + strand at 162.595 kb on - strand at 162.595 kb on - strand at 162.595 kb on - strand at 162.600 kb on + strand at 162.604 kb on + strand at 162.604 kb on + strand at 162.605 kb on - strand at 162.626 kb on - strand at 162.644 kb on + strand at 162.645 kb on - strand at 162.657 kb on + strand at 162.672 kb on - strand at 162.677 kb on - strand at 162.681 kb on + strand at 162.682 kb on - strand at 162.698 kb on + strand at 162.699 kb on - strand at 162.702 kb on + strand at 162.702 kb on + strand at 162.702 kb on + strand at 162.702 kb on + strand at 162.703 kb on - strand at 162.703 kb on - strand at 162.735 kb on + strand at 162.736 kb on - strand at 162.745 kb on + strand at 162.746 kb on - strand at 162.833 kb on + strand at 162.872 kb on - strand at 162.898 kb on - strand, within Echvi_0160 at 163.009 kb on + strand, within Echvi_0160 at 163.040 kb on - strand, within Echvi_0160 at 163.063 kb on - strand, within Echvi_0160 at 163.063 kb on - strand, within Echvi_0160 at 163.129 kb on - strand, within Echvi_0160 at 163.150 kb on + strand, within Echvi_0160 at 163.276 kb on + strand, within Echvi_0160 at 163.322 kb on + strand, within Echvi_0160 at 163.322 kb on + strand, within Echvi_0160 at 163.322 kb on + strand, within Echvi_0160 at 163.322 kb on + strand, within Echvi_0160 at 163.322 kb on + strand, within Echvi_0160 at 163.322 kb on + strand, within Echvi_0160 at 163.322 kb on + strand, within Echvi_0160 at 163.322 kb on + strand, within Echvi_0160 at 163.323 kb on - strand, within Echvi_0160 at 163.323 kb on - strand, within Echvi_0160 at 163.323 kb on - strand, within Echvi_0160 at 163.323 kb on - strand, within Echvi_0160 at 163.323 kb on - strand, within Echvi_0160 at 163.360 kb on + strand, within Echvi_0160 at 163.361 kb on - strand, within Echvi_0160 at 163.363 kb on + strand, within Echvi_0160 at 163.469 kb on - strand, within Echvi_0160 at 163.501 kb on + strand, within Echvi_0160 at 163.501 kb on + strand, within Echvi_0160 at 163.501 kb on + strand, within Echvi_0160 at 163.501 kb on + strand, within Echvi_0160 at 163.501 kb on + strand, within Echvi_0160 at 163.502 kb on - strand, within Echvi_0160 at 163.502 kb on - strand, within Echvi_0160 at 163.502 kb on - strand, within Echvi_0160 at 163.548 kb on + strand, within Echvi_0160 at 163.548 kb on + strand, within Echvi_0160 at 163.549 kb on - strand, within Echvi_0160 at 163.549 kb on - strand, within Echvi_0160 at 163.558 kb on + strand, within Echvi_0160 at 163.627 kb on + strand, within Echvi_0160 at 163.627 kb on + strand, within Echvi_0160 at 163.711 kb on + strand, within Echvi_0160 at 163.712 kb on - strand, within Echvi_0160 at 163.713 kb on + strand, within Echvi_0160 at 163.713 kb on + strand, within Echvi_0160 at 163.713 kb on + strand, within Echvi_0160 at 163.714 kb on - strand, within Echvi_0160 at 163.842 kb on - strand, within Echvi_0160 at 163.842 kb on - strand, within Echvi_0160 at 163.844 kb on - strand, within Echvi_0160 at 164.000 kb on - strand, within Echvi_0160 at 164.014 kb on - strand, within Echvi_0160 at 164.014 kb on - strand, within Echvi_0160 at 164.019 kb on + strand, within Echvi_0160 at 164.019 kb on + strand, within Echvi_0160 at 164.020 kb on - strand, within Echvi_0160 at 164.020 kb on - strand, within Echvi_0160 at 164.073 kb on + strand, within Echvi_0160 at 164.074 kb on - strand, within Echvi_0160 at 164.076 kb on + strand, within Echvi_0160 at 164.102 kb on - strand, within Echvi_0160 at 164.164 kb on + strand at 164.204 kb on - strand at 164.290 kb on + strand at 164.290 kb on + strand at 164.293 kb on - strand at 164.293 kb on - strand at 164.331 kb on + strand at 164.332 kb on - strand at 164.342 kb on + strand at 164.342 kb on + strand at 164.343 kb on - strand at 164.343 kb on - strand at 164.347 kb on + strand at 164.347 kb on + strand at 164.347 kb on + strand at 164.348 kb on - strand at 164.408 kb on + strand at 164.429 kb on + strand at 164.569 kb on + strand at 164.575 kb on + strand at 164.746 kb on - strand, within Echvi_0161 at 164.797 kb on + strand, within Echvi_0161 at 164.868 kb on + strand, within Echvi_0161 at 164.868 kb on + strand, within Echvi_0161 at 165.027 kb on + strand, within Echvi_0161 at 165.088 kb on + strand, within Echvi_0161 at 165.088 kb on + strand, within Echvi_0161 at 165.110 kb on + strand, within Echvi_0161 at 165.110 kb on + strand, within Echvi_0161 at 165.174 kb on + strand, within Echvi_0161 at 165.174 kb on + strand, within Echvi_0161 at 165.174 kb on + strand, within Echvi_0161 at 165.175 kb on - strand, within Echvi_0161 at 165.175 kb on - strand, within Echvi_0161 at 165.175 kb on - strand, within Echvi_0161 at 165.177 kb on + strand, within Echvi_0161 at 165.177 kb on + strand, within Echvi_0161 at 165.178 kb on - strand, within Echvi_0161 at 165.178 kb on - strand, within Echvi_0161
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.58 mg/ml remove 161,780 + Echvi_0159 0.27 -0.4 161,781 - Echvi_0159 0.27 +0.0 161,781 - Echvi_0159 0.27 +1.2 161,830 - Echvi_0159 0.31 -0.3 161,834 + Echvi_0159 0.32 +2.4 161,834 + Echvi_0159 0.32 -0.1 161,835 - Echvi_0159 0.32 -1.0 161,954 + Echvi_0159 0.43 -0.3 161,954 + Echvi_0159 0.43 -0.2 161,954 + Echvi_0159 0.43 -0.4 161,955 - Echvi_0159 0.43 +0.7 161,955 - Echvi_0159 0.43 -0.6 161,955 - Echvi_0159 0.43 +0.9 161,955 - Echvi_0159 0.43 +0.6 162,015 + Echvi_0159 0.49 -0.3 162,015 - Echvi_0159 0.49 +0.1 162,016 - Echvi_0159 0.49 -0.4 162,016 - Echvi_0159 0.49 +0.7 162,017 + Echvi_0159 0.49 -1.6 162,017 + Echvi_0159 0.49 +0.7 162,018 - Echvi_0159 0.49 +0.4 162,192 + Echvi_0159 0.65 +1.4 162,192 + Echvi_0159 0.65 -1.6 162,246 + Echvi_0159 0.70 +0.9 162,255 + Echvi_0159 0.71 -1.3 162,261 + Echvi_0159 0.72 -1.6 162,261 + Echvi_0159 0.72 -0.2 162,261 + Echvi_0159 0.72 +0.7 162,261 + Echvi_0159 0.72 +0.4 162,317 + Echvi_0159 0.77 -0.8 162,317 + Echvi_0159 0.77 +0.2 162,317 + Echvi_0159 0.77 +0.5 162,318 - Echvi_0159 0.77 -1.5 162,321 + Echvi_0159 0.77 +1.0 162,321 + Echvi_0159 0.77 -0.3 162,321 + Echvi_0159 0.77 -0.7 162,321 + Echvi_0159 0.77 -0.2 162,323 + Echvi_0159 0.78 -0.9 162,324 - Echvi_0159 0.78 +0.3 162,341 + Echvi_0159 0.79 -0.6 162,341 + Echvi_0159 0.79 -0.9 162,431 + Echvi_0159 0.88 -0.6 162,459 - -0.2 162,459 - -0.9 162,468 + +1.0 162,469 - -1.6 162,482 - -0.2 162,482 - -0.9 162,482 - -0.5 162,482 - +0.9 162,531 - +0.8 162,531 - -0.0 162,570 + -0.3 162,570 + +0.0 162,595 - -0.2 162,595 - -0.3 162,595 - +0.7 162,600 + -0.3 162,604 + -1.2 162,604 + -0.7 162,605 - +0.8 162,626 - -0.2 162,644 + +0.1 162,645 - +0.1 162,657 + -0.7 162,672 - -0.6 162,677 - +0.2 162,681 + +0.7 162,682 - +0.6 162,698 + +1.5 162,699 - +0.7 162,702 + +1.2 162,702 + -0.3 162,702 + +0.3 162,702 + -1.8 162,703 - +0.2 162,703 - -0.1 162,735 + +1.3 162,736 - +0.1 162,745 + +0.6 162,746 - +1.8 162,833 + +1.2 162,872 - +0.9 162,898 - Echvi_0160 0.10 -1.1 163,009 + Echvi_0160 0.17 +1.1 163,040 - Echvi_0160 0.19 -1.5 163,063 - Echvi_0160 0.21 +0.1 163,063 - Echvi_0160 0.21 -0.0 163,129 - Echvi_0160 0.25 +1.0 163,150 + Echvi_0160 0.26 +0.2 163,276 + Echvi_0160 0.34 -0.9 163,322 + Echvi_0160 0.37 +0.7 163,322 + Echvi_0160 0.37 -1.1 163,322 + Echvi_0160 0.37 +2.4 163,322 + Echvi_0160 0.37 +0.3 163,322 + Echvi_0160 0.37 -0.3 163,322 + Echvi_0160 0.37 -1.2 163,322 + Echvi_0160 0.37 +1.4 163,322 + Echvi_0160 0.37 -0.3 163,323 - Echvi_0160 0.37 +0.2 163,323 - Echvi_0160 0.37 +0.1 163,323 - Echvi_0160 0.37 -0.4 163,323 - Echvi_0160 0.37 -0.8 163,323 - Echvi_0160 0.37 +1.1 163,360 + Echvi_0160 0.40 +0.1 163,361 - Echvi_0160 0.40 +0.2 163,363 + Echvi_0160 0.40 -1.2 163,469 - Echvi_0160 0.46 +0.0 163,501 + Echvi_0160 0.48 -0.3 163,501 + Echvi_0160 0.48 -0.6 163,501 + Echvi_0160 0.48 -0.9 163,501 + Echvi_0160 0.48 -0.1 163,501 + Echvi_0160 0.48 +1.2 163,502 - Echvi_0160 0.48 +0.2 163,502 - Echvi_0160 0.48 +0.8 163,502 - Echvi_0160 0.48 -0.5 163,548 + Echvi_0160 0.51 +0.7 163,548 + Echvi_0160 0.51 +0.4 163,549 - Echvi_0160 0.51 -0.5 163,549 - Echvi_0160 0.51 +0.5 163,558 + Echvi_0160 0.52 +0.0 163,627 + Echvi_0160 0.56 +0.7 163,627 + Echvi_0160 0.56 -0.0 163,711 + Echvi_0160 0.62 +0.1 163,712 - Echvi_0160 0.62 -0.5 163,713 + Echvi_0160 0.62 -1.4 163,713 + Echvi_0160 0.62 +0.7 163,713 + Echvi_0160 0.62 -0.1 163,714 - Echvi_0160 0.62 +0.4 163,842 - Echvi_0160 0.70 -0.1 163,842 - Echvi_0160 0.70 +0.4 163,844 - Echvi_0160 0.70 +0.4 164,000 - Echvi_0160 0.80 -0.0 164,014 - Echvi_0160 0.81 +0.6 164,014 - Echvi_0160 0.81 -0.8 164,019 + Echvi_0160 0.81 +0.5 164,019 + Echvi_0160 0.81 +1.3 164,020 - Echvi_0160 0.81 -0.0 164,020 - Echvi_0160 0.81 -0.6 164,073 + Echvi_0160 0.85 -0.3 164,074 - Echvi_0160 0.85 -1.7 164,076 + Echvi_0160 0.85 +2.0 164,102 - Echvi_0160 0.86 -0.2 164,164 + -0.3 164,204 - -1.1 164,290 + +0.3 164,290 + -0.5 164,293 - -0.1 164,293 - +0.0 164,331 + -0.1 164,332 - -1.6 164,342 + -0.7 164,342 + -0.2 164,343 - -0.6 164,343 - -0.0 164,347 + -0.3 164,347 + -1.8 164,347 + +0.7 164,348 - -0.4 164,408 + +1.7 164,429 + +1.8 164,569 + -1.6 164,575 + -0.1 164,746 - Echvi_0161 0.24 -0.3 164,797 + Echvi_0161 0.29 +0.2 164,868 + Echvi_0161 0.37 +0.7 164,868 + Echvi_0161 0.37 -0.4 165,027 + Echvi_0161 0.53 -1.3 165,088 + Echvi_0161 0.59 -1.6 165,088 + Echvi_0161 0.59 +0.1 165,110 + Echvi_0161 0.62 -1.2 165,110 + Echvi_0161 0.62 -0.3 165,174 + Echvi_0161 0.68 -1.3 165,174 + Echvi_0161 0.68 -2.0 165,174 + Echvi_0161 0.68 +0.5 165,175 - Echvi_0161 0.68 -1.9 165,175 - Echvi_0161 0.68 -1.6 165,175 - Echvi_0161 0.68 -1.6 165,177 + Echvi_0161 0.69 -0.5 165,177 + Echvi_0161 0.69 -0.7 165,178 - Echvi_0161 0.69 -2.2 165,178 - Echvi_0161 0.69 -0.9
Or see this region's nucleotide sequence