Experiment: Chlorite 1.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt fecD and fecC overlap by 4 nucleotides fecC and fecB overlap by 4 nucleotides fecB and fecA are separated by 44 nucleotides
b4288: fecD - KpLE2 phage-like element; iron-dicitrate transporter subunit (NCBI), at 4,509,481 to 4,510,437
fecD
b4289: fecC - KpLE2 phage-like element; iron-dicitrate transporter subunit (NCBI), at 4,510,434 to 4,511,432
fecC
b4290: fecB - citrate-dependent iron transport, periplasmic protein (VIMSS), at 4,511,429 to 4,512,331
fecB
b4291: fecA - KpLE2 phage-like element; ferric citrate outer membrane transporter (NCBI), at 4,512,376 to 4,514,700
fecA
Position (kb)
4511
4512
4513 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4510.471 kb on + strand at 4510.507 kb on + strand at 4510.546 kb on - strand, within fecC at 4510.546 kb on - strand, within fecC at 4510.578 kb on + strand, within fecC at 4510.580 kb on - strand, within fecC at 4510.581 kb on - strand, within fecC at 4510.617 kb on - strand, within fecC at 4510.642 kb on - strand, within fecC at 4510.642 kb on - strand, within fecC at 4510.685 kb on - strand, within fecC at 4510.687 kb on - strand, within fecC at 4510.692 kb on - strand, within fecC at 4510.702 kb on - strand, within fecC at 4510.702 kb on - strand, within fecC at 4510.707 kb on - strand, within fecC at 4510.711 kb on + strand, within fecC at 4510.729 kb on - strand, within fecC at 4510.743 kb on - strand, within fecC at 4510.745 kb on + strand, within fecC at 4510.745 kb on + strand, within fecC at 4510.748 kb on + strand, within fecC at 4510.748 kb on + strand, within fecC at 4510.750 kb on - strand, within fecC at 4510.750 kb on - strand, within fecC at 4510.783 kb on - strand, within fecC at 4510.800 kb on + strand, within fecC at 4510.805 kb on - strand, within fecC at 4510.819 kb on - strand, within fecC at 4510.821 kb on - strand, within fecC at 4510.836 kb on + strand, within fecC at 4510.836 kb on - strand, within fecC at 4510.836 kb on - strand, within fecC at 4510.852 kb on - strand, within fecC at 4510.868 kb on + strand, within fecC at 4510.979 kb on + strand, within fecC at 4510.979 kb on + strand, within fecC at 4511.022 kb on + strand, within fecC at 4511.022 kb on + strand, within fecC at 4511.080 kb on - strand, within fecC at 4511.080 kb on - strand, within fecC at 4511.081 kb on - strand, within fecC at 4511.090 kb on + strand, within fecC at 4511.121 kb on + strand, within fecC at 4511.121 kb on + strand, within fecC at 4511.153 kb on + strand, within fecC at 4511.153 kb on + strand, within fecC at 4511.153 kb on + strand, within fecC at 4511.161 kb on - strand, within fecC at 4511.192 kb on - strand, within fecC at 4511.248 kb on - strand, within fecC at 4511.270 kb on + strand, within fecC at 4511.270 kb on + strand, within fecC at 4511.290 kb on - strand, within fecC at 4511.290 kb on - strand, within fecC at 4511.293 kb on + strand, within fecC at 4511.293 kb on + strand, within fecC at 4511.339 kb on + strand at 4511.403 kb on - strand at 4511.405 kb on + strand at 4511.406 kb on - strand at 4511.460 kb on - strand at 4511.523 kb on + strand, within fecB at 4511.523 kb on + strand, within fecB at 4511.526 kb on - strand, within fecB at 4511.565 kb on + strand, within fecB at 4511.570 kb on - strand, within fecB at 4511.572 kb on - strand, within fecB at 4511.595 kb on - strand, within fecB at 4511.595 kb on - strand, within fecB at 4511.604 kb on + strand, within fecB at 4511.604 kb on + strand, within fecB at 4511.604 kb on + strand, within fecB at 4511.607 kb on - strand, within fecB at 4511.607 kb on - strand, within fecB at 4511.616 kb on + strand, within fecB at 4511.622 kb on - strand, within fecB at 4511.638 kb on - strand, within fecB at 4511.638 kb on - strand, within fecB at 4511.639 kb on - strand, within fecB at 4511.639 kb on - strand, within fecB at 4511.683 kb on + strand, within fecB at 4511.683 kb on + strand, within fecB at 4511.727 kb on - strand, within fecB at 4511.727 kb on - strand, within fecB at 4511.745 kb on + strand at 4511.745 kb on + strand, within fecB at 4511.811 kb on + strand, within fecB at 4511.811 kb on + strand, within fecB at 4511.824 kb on + strand, within fecB at 4511.846 kb on - strand, within fecB at 4511.988 kb on + strand, within fecB at 4511.988 kb on + strand, within fecB at 4512.019 kb on - strand, within fecB at 4512.061 kb on - strand, within fecB at 4512.095 kb on + strand, within fecB at 4512.095 kb on + strand, within fecB at 4512.096 kb on - strand, within fecB at 4512.096 kb on - strand, within fecB at 4512.119 kb on - strand, within fecB at 4512.127 kb on + strand, within fecB at 4512.127 kb on + strand, within fecB at 4512.129 kb on - strand, within fecB at 4512.145 kb on + strand, within fecB at 4512.235 kb on + strand, within fecB at 4512.235 kb on + strand, within fecB at 4512.235 kb on + strand, within fecB at 4512.235 kb on + strand, within fecB at 4512.262 kb on - strand at 4512.262 kb on - strand at 4512.262 kb on - strand at 4512.262 kb on - strand at 4512.341 kb on - strand at 4512.372 kb on - strand at 4512.372 kb on - strand at 4512.417 kb on + strand at 4512.417 kb on + strand at 4512.422 kb on + strand at 4512.452 kb on - strand at 4512.460 kb on - strand at 4512.499 kb on - strand at 4512.527 kb on + strand at 4512.527 kb on + strand at 4512.581 kb on - strand at 4512.586 kb on - strand at 4512.673 kb on + strand, within fecA at 4512.735 kb on - strand, within fecA at 4512.735 kb on - strand, within fecA at 4512.771 kb on - strand, within fecA at 4512.812 kb on + strand, within fecA at 4512.820 kb on - strand, within fecA at 4512.830 kb on - strand, within fecA at 4512.835 kb on - strand, within fecA at 4512.835 kb on - strand, within fecA at 4512.881 kb on + strand, within fecA at 4512.902 kb on - strand, within fecA at 4512.902 kb on - strand, within fecA at 4512.962 kb on + strand, within fecA at 4512.962 kb on + strand, within fecA at 4512.967 kb on - strand, within fecA at 4512.986 kb on - strand, within fecA at 4513.025 kb on + strand, within fecA at 4513.025 kb on + strand, within fecA at 4513.037 kb on - strand, within fecA at 4513.042 kb on + strand, within fecA at 4513.045 kb on + strand, within fecA at 4513.045 kb on + strand, within fecA at 4513.050 kb on - strand, within fecA at 4513.050 kb on - strand, within fecA at 4513.050 kb on - strand, within fecA at 4513.050 kb on - strand, within fecA at 4513.050 kb on - strand, within fecA at 4513.052 kb on - strand, within fecA at 4513.134 kb on + strand, within fecA at 4513.174 kb on + strand, within fecA at 4513.182 kb on - strand, within fecA at 4513.271 kb on + strand, within fecA
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 1.25 mM remove 4,510,471 + +2.3 4,510,507 + +1.5 4,510,546 - fecC b4289 0.11 +2.1 4,510,546 - fecC b4289 0.11 +1.9 4,510,578 + fecC b4289 0.14 +0.8 4,510,580 - fecC b4289 0.15 +1.1 4,510,581 - fecC b4289 0.15 +1.7 4,510,617 - fecC b4289 0.18 +2.4 4,510,642 - fecC b4289 0.21 +1.8 4,510,642 - fecC b4289 0.21 +1.8 4,510,685 - fecC b4289 0.25 +0.6 4,510,687 - fecC b4289 0.25 +1.6 4,510,692 - fecC b4289 0.26 +0.8 4,510,702 - fecC b4289 0.27 +2.3 4,510,702 - fecC b4289 0.27 +2.3 4,510,707 - fecC b4289 0.27 +2.7 4,510,711 + fecC b4289 0.28 +1.8 4,510,729 - fecC b4289 0.30 -0.4 4,510,743 - fecC b4289 0.31 +1.6 4,510,745 + fecC b4289 0.31 +0.4 4,510,745 + fecC b4289 0.31 +2.0 4,510,748 + fecC b4289 0.31 +2.1 4,510,748 + fecC b4289 0.31 +2.7 4,510,750 - fecC b4289 0.32 +1.6 4,510,750 - fecC b4289 0.32 +1.9 4,510,783 - fecC b4289 0.35 +1.4 4,510,800 + fecC b4289 0.37 +2.1 4,510,805 - fecC b4289 0.37 -0.4 4,510,819 - fecC b4289 0.39 +1.7 4,510,821 - fecC b4289 0.39 +2.9 4,510,836 + fecC b4289 0.40 +2.0 4,510,836 - fecC b4289 0.40 +2.0 4,510,836 - fecC b4289 0.40 +0.6 4,510,852 - fecC b4289 0.42 -0.0 4,510,868 + fecC b4289 0.43 -0.8 4,510,979 + fecC b4289 0.55 +1.8 4,510,979 + fecC b4289 0.55 +1.8 4,511,022 + fecC b4289 0.59 +1.8 4,511,022 + fecC b4289 0.59 +3.4 4,511,080 - fecC b4289 0.65 +0.6 4,511,080 - fecC b4289 0.65 +2.9 4,511,081 - fecC b4289 0.65 +0.8 4,511,090 + fecC b4289 0.66 +0.6 4,511,121 + fecC b4289 0.69 +1.1 4,511,121 + fecC b4289 0.69 +2.0 4,511,153 + fecC b4289 0.72 +2.1 4,511,153 + fecC b4289 0.72 +2.4 4,511,153 + fecC b4289 0.72 +2.7 4,511,161 - fecC b4289 0.73 +1.1 4,511,192 - fecC b4289 0.76 +2.0 4,511,248 - fecC b4289 0.81 +2.4 4,511,270 + fecC b4289 0.84 -1.0 4,511,270 + fecC b4289 0.84 +1.0 4,511,290 - fecC b4289 0.86 +1.9 4,511,290 - fecC b4289 0.86 +2.3 4,511,293 + fecC b4289 0.86 +0.9 4,511,293 + fecC b4289 0.86 +2.0 4,511,339 + +2.0 4,511,403 - +1.1 4,511,405 + +2.5 4,511,406 - -1.4 4,511,460 - +1.4 4,511,523 + fecB b4290 0.10 +2.7 4,511,523 + fecB b4290 0.10 +2.0 4,511,526 - fecB b4290 0.11 +2.1 4,511,565 + fecB b4290 0.15 +1.6 4,511,570 - fecB b4290 0.16 +3.5 4,511,572 - fecB b4290 0.16 +2.1 4,511,595 - fecB b4290 0.18 +2.6 4,511,595 - fecB b4290 0.18 +1.7 4,511,604 + fecB b4290 0.19 +2.0 4,511,604 + fecB b4290 0.19 +2.1 4,511,604 + fecB b4290 0.19 +0.6 4,511,607 - fecB b4290 0.20 +1.4 4,511,607 - fecB b4290 0.20 +2.6 4,511,616 + fecB b4290 0.21 +1.3 4,511,622 - fecB b4290 0.21 +1.6 4,511,638 - fecB b4290 0.23 +1.1 4,511,638 - fecB b4290 0.23 -1.8 4,511,639 - fecB b4290 0.23 +1.1 4,511,639 - fecB b4290 0.23 +0.2 4,511,683 + fecB b4290 0.28 +2.0 4,511,683 + fecB b4290 0.28 +1.0 4,511,727 - fecB b4290 0.33 +2.2 4,511,727 - fecB b4290 0.33 +2.1 4,511,745 + +0.6 4,511,745 + fecB b4290 0.35 +2.6 4,511,811 + fecB b4290 0.42 -0.4 4,511,811 + fecB b4290 0.42 +2.6 4,511,824 + fecB b4290 0.44 -0.2 4,511,846 - fecB b4290 0.46 +2.5 4,511,988 + fecB b4290 0.62 +1.0 4,511,988 + fecB b4290 0.62 +1.9 4,512,019 - fecB b4290 0.65 +1.9 4,512,061 - fecB b4290 0.70 +1.6 4,512,095 + fecB b4290 0.74 +1.2 4,512,095 + fecB b4290 0.74 +1.8 4,512,096 - fecB b4290 0.74 +2.0 4,512,096 - fecB b4290 0.74 +2.1 4,512,119 - fecB b4290 0.76 +1.6 4,512,127 + fecB b4290 0.77 +1.4 4,512,127 + fecB b4290 0.77 +2.0 4,512,129 - fecB b4290 0.78 +2.1 4,512,145 + fecB b4290 0.79 +1.6 4,512,235 + fecB b4290 0.89 +2.4 4,512,235 + fecB b4290 0.89 +3.3 4,512,235 + fecB b4290 0.89 +2.4 4,512,235 + fecB b4290 0.89 +1.0 4,512,262 - -0.3 4,512,262 - -1.0 4,512,262 - +1.0 4,512,262 - +0.3 4,512,341 - +0.6 4,512,372 - -2.1 4,512,372 - -1.0 4,512,417 + +1.6 4,512,417 + +2.6 4,512,422 + -0.9 4,512,452 - +0.9 4,512,460 - +1.7 4,512,499 - +0.9 4,512,527 + +1.8 4,512,527 + +3.0 4,512,581 - +1.5 4,512,586 - +1.9 4,512,673 + fecA b4291 0.13 +1.8 4,512,735 - fecA b4291 0.15 +3.1 4,512,735 - fecA b4291 0.15 -0.4 4,512,771 - fecA b4291 0.17 +2.6 4,512,812 + fecA b4291 0.19 +1.9 4,512,820 - fecA b4291 0.19 +1.7 4,512,830 - fecA b4291 0.20 +1.7 4,512,835 - fecA b4291 0.20 +0.7 4,512,835 - fecA b4291 0.20 +3.6 4,512,881 + fecA b4291 0.22 +0.8 4,512,902 - fecA b4291 0.23 +0.8 4,512,902 - fecA b4291 0.23 +2.0 4,512,962 + fecA b4291 0.25 +0.1 4,512,962 + fecA b4291 0.25 -1.3 4,512,967 - fecA b4291 0.25 +0.6 4,512,986 - fecA b4291 0.26 +1.9 4,513,025 + fecA b4291 0.28 +2.5 4,513,025 + fecA b4291 0.28 +1.4 4,513,037 - fecA b4291 0.28 +1.8 4,513,042 + fecA b4291 0.29 +1.6 4,513,045 + fecA b4291 0.29 +0.4 4,513,045 + fecA b4291 0.29 +1.4 4,513,050 - fecA b4291 0.29 +0.6 4,513,050 - fecA b4291 0.29 +2.6 4,513,050 - fecA b4291 0.29 -0.4 4,513,050 - fecA b4291 0.29 +1.9 4,513,050 - fecA b4291 0.29 +0.7 4,513,052 - fecA b4291 0.29 +1.6 4,513,134 + fecA b4291 0.33 +2.6 4,513,174 + fecA b4291 0.34 +1.6 4,513,182 - fecA b4291 0.35 +1.2 4,513,271 + fecA b4291 0.38 +1.8
Or see this region's nucleotide sequence