Experiment: Chlorite 1.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt fecE and fecD are separated by 0 nucleotides fecD and fecC overlap by 4 nucleotides fecC and fecB overlap by 4 nucleotides
b4287: fecE - KpLE2 phage-like element; iron-dicitrate transporter subunit (NCBI), at 4,508,713 to 4,509,480
fecE
b4288: fecD - KpLE2 phage-like element; iron-dicitrate transporter subunit (NCBI), at 4,509,481 to 4,510,437
fecD
b4289: fecC - KpLE2 phage-like element; iron-dicitrate transporter subunit (NCBI), at 4,510,434 to 4,511,432
fecC
b4290: fecB - citrate-dependent iron transport, periplasmic protein (VIMSS), at 4,511,429 to 4,512,331
fecB
Position (kb)
4509
4510
4511 Strain fitness (log2 ratio)
-1
0
1
2
3
4
5 at 4508.503 kb on - strand at 4508.503 kb on - strand at 4508.544 kb on - strand at 4508.546 kb on + strand at 4508.549 kb on - strand at 4508.549 kb on - strand at 4508.561 kb on + strand at 4508.562 kb on + strand at 4508.591 kb on + strand at 4508.591 kb on + strand at 4508.603 kb on + strand at 4508.640 kb on - strand at 4508.701 kb on + strand at 4508.701 kb on + strand at 4508.714 kb on - strand at 4508.714 kb on - strand at 4508.714 kb on - strand at 4508.801 kb on - strand, within fecE at 4508.835 kb on - strand, within fecE at 4508.835 kb on - strand, within fecE at 4508.837 kb on - strand, within fecE at 4508.891 kb on - strand, within fecE at 4508.893 kb on + strand, within fecE at 4508.923 kb on + strand, within fecE at 4508.923 kb on + strand, within fecE at 4508.953 kb on + strand, within fecE at 4508.953 kb on + strand, within fecE at 4508.966 kb on - strand, within fecE at 4509.005 kb on - strand, within fecE at 4509.016 kb on - strand, within fecE at 4509.016 kb on - strand, within fecE at 4509.021 kb on - strand, within fecE at 4509.021 kb on - strand, within fecE at 4509.103 kb on + strand, within fecE at 4509.103 kb on + strand, within fecE at 4509.103 kb on + strand, within fecE at 4509.154 kb on + strand, within fecE at 4509.162 kb on - strand, within fecE at 4509.162 kb on - strand, within fecE at 4509.196 kb on + strand, within fecE at 4509.196 kb on + strand, within fecE at 4509.196 kb on + strand, within fecE at 4509.202 kb on - strand, within fecE at 4509.221 kb on + strand, within fecE at 4509.239 kb on - strand, within fecE at 4509.239 kb on - strand, within fecE at 4509.321 kb on - strand, within fecE at 4509.369 kb on + strand, within fecE at 4509.376 kb on + strand, within fecE at 4509.376 kb on + strand, within fecE at 4509.379 kb on + strand, within fecE at 4509.392 kb on - strand, within fecE at 4509.412 kb on + strand at 4509.429 kb on - strand at 4509.429 kb on - strand at 4509.441 kb on + strand at 4509.498 kb on - strand at 4509.619 kb on - strand, within fecD at 4509.635 kb on + strand, within fecD at 4509.654 kb on + strand, within fecD at 4509.671 kb on + strand, within fecD at 4509.671 kb on + strand, within fecD at 4509.672 kb on - strand, within fecD at 4509.673 kb on + strand, within fecD at 4509.673 kb on + strand, within fecD at 4509.685 kb on - strand, within fecD at 4509.685 kb on - strand, within fecD at 4509.690 kb on + strand, within fecD at 4509.698 kb on - strand, within fecD at 4509.698 kb on - strand, within fecD at 4509.821 kb on - strand, within fecD at 4509.909 kb on + strand, within fecD at 4509.926 kb on + strand, within fecD at 4510.001 kb on + strand, within fecD at 4510.028 kb on - strand, within fecD at 4510.102 kb on + strand, within fecD at 4510.118 kb on + strand, within fecD at 4510.118 kb on + strand, within fecD at 4510.143 kb on + strand, within fecD at 4510.143 kb on + strand, within fecD at 4510.143 kb on + strand, within fecD at 4510.170 kb on + strand, within fecD at 4510.170 kb on + strand, within fecD at 4510.178 kb on - strand, within fecD at 4510.203 kb on - strand, within fecD at 4510.203 kb on - strand, within fecD at 4510.212 kb on - strand, within fecD at 4510.255 kb on + strand, within fecD at 4510.285 kb on - strand, within fecD at 4510.285 kb on - strand, within fecD at 4510.302 kb on - strand, within fecD at 4510.302 kb on - strand, within fecD at 4510.353 kb on + strand at 4510.376 kb on + strand at 4510.376 kb on + strand at 4510.381 kb on + strand at 4510.384 kb on - strand at 4510.401 kb on + strand at 4510.401 kb on - strand at 4510.410 kb on - strand at 4510.410 kb on - strand at 4510.471 kb on + strand at 4510.507 kb on + strand at 4510.546 kb on - strand, within fecC at 4510.546 kb on - strand, within fecC at 4510.578 kb on + strand, within fecC at 4510.580 kb on - strand, within fecC at 4510.581 kb on - strand, within fecC at 4510.617 kb on - strand, within fecC at 4510.642 kb on - strand, within fecC at 4510.642 kb on - strand, within fecC at 4510.685 kb on - strand, within fecC at 4510.687 kb on - strand, within fecC at 4510.692 kb on - strand, within fecC at 4510.702 kb on - strand, within fecC at 4510.702 kb on - strand, within fecC at 4510.707 kb on - strand, within fecC at 4510.711 kb on + strand, within fecC at 4510.729 kb on - strand, within fecC at 4510.743 kb on - strand, within fecC at 4510.745 kb on + strand, within fecC at 4510.745 kb on + strand, within fecC at 4510.748 kb on + strand, within fecC at 4510.748 kb on + strand, within fecC at 4510.750 kb on - strand, within fecC at 4510.750 kb on - strand, within fecC at 4510.783 kb on - strand, within fecC at 4510.800 kb on + strand, within fecC at 4510.805 kb on - strand, within fecC at 4510.819 kb on - strand, within fecC at 4510.821 kb on - strand, within fecC at 4510.836 kb on + strand, within fecC at 4510.836 kb on - strand, within fecC at 4510.836 kb on - strand, within fecC at 4510.852 kb on - strand, within fecC at 4510.868 kb on + strand, within fecC at 4510.979 kb on + strand, within fecC at 4510.979 kb on + strand, within fecC at 4511.022 kb on + strand, within fecC at 4511.022 kb on + strand, within fecC at 4511.080 kb on - strand, within fecC at 4511.080 kb on - strand, within fecC at 4511.081 kb on - strand, within fecC at 4511.090 kb on + strand, within fecC at 4511.121 kb on + strand, within fecC at 4511.121 kb on + strand, within fecC at 4511.153 kb on + strand, within fecC at 4511.153 kb on + strand, within fecC at 4511.153 kb on + strand, within fecC at 4511.161 kb on - strand, within fecC at 4511.192 kb on - strand, within fecC at 4511.248 kb on - strand, within fecC at 4511.270 kb on + strand, within fecC at 4511.270 kb on + strand, within fecC at 4511.290 kb on - strand, within fecC at 4511.290 kb on - strand, within fecC at 4511.293 kb on + strand, within fecC at 4511.293 kb on + strand, within fecC at 4511.339 kb on + strand at 4511.403 kb on - strand at 4511.405 kb on + strand at 4511.406 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 1.25 mM remove 4,508,503 - -0.8 4,508,503 - +2.4 4,508,544 - -0.0 4,508,546 + +0.6 4,508,549 - -0.4 4,508,549 - +0.6 4,508,561 + +0.6 4,508,562 + +1.1 4,508,591 + -1.0 4,508,591 + -0.4 4,508,603 + -0.8 4,508,640 - +2.1 4,508,701 + -0.2 4,508,701 + -0.1 4,508,714 - -0.4 4,508,714 - +0.6 4,508,714 - +1.4 4,508,801 - fecE b4287 0.11 +1.6 4,508,835 - fecE b4287 0.16 +2.1 4,508,835 - fecE b4287 0.16 +1.8 4,508,837 - fecE b4287 0.16 +1.4 4,508,891 - fecE b4287 0.23 +1.0 4,508,893 + fecE b4287 0.23 +0.6 4,508,923 + fecE b4287 0.27 +0.6 4,508,923 + fecE b4287 0.27 +0.6 4,508,953 + fecE b4287 0.31 -0.0 4,508,953 + fecE b4287 0.31 -0.4 4,508,966 - fecE b4287 0.33 +1.8 4,509,005 - fecE b4287 0.38 +2.7 4,509,016 - fecE b4287 0.39 +1.8 4,509,016 - fecE b4287 0.39 -1.4 4,509,021 - fecE b4287 0.40 +2.6 4,509,021 - fecE b4287 0.40 -0.4 4,509,103 + fecE b4287 0.51 +1.2 4,509,103 + fecE b4287 0.51 +2.2 4,509,103 + fecE b4287 0.51 +3.4 4,509,154 + fecE b4287 0.57 +1.3 4,509,162 - fecE b4287 0.58 +1.8 4,509,162 - fecE b4287 0.58 +1.8 4,509,196 + fecE b4287 0.63 +3.6 4,509,196 + fecE b4287 0.63 +0.8 4,509,196 + fecE b4287 0.63 +1.3 4,509,202 - fecE b4287 0.64 +1.8 4,509,221 + fecE b4287 0.66 +2.3 4,509,239 - fecE b4287 0.68 +1.3 4,509,239 - fecE b4287 0.68 +1.4 4,509,321 - fecE b4287 0.79 +1.3 4,509,369 + fecE b4287 0.85 +5.1 4,509,376 + fecE b4287 0.86 +1.3 4,509,376 + fecE b4287 0.86 +0.8 4,509,379 + fecE b4287 0.87 +1.3 4,509,392 - fecE b4287 0.88 +2.7 4,509,412 + +1.4 4,509,429 - +2.1 4,509,429 - +2.3 4,509,441 + +2.0 4,509,498 - +2.1 4,509,619 - fecD b4288 0.14 +1.1 4,509,635 + fecD b4288 0.16 -0.4 4,509,654 + fecD b4288 0.18 +1.6 4,509,671 + fecD b4288 0.20 +1.7 4,509,671 + fecD b4288 0.20 +1.1 4,509,672 - fecD b4288 0.20 +2.9 4,509,673 + fecD b4288 0.20 -0.4 4,509,673 + fecD b4288 0.20 +1.0 4,509,685 - fecD b4288 0.21 +1.3 4,509,685 - fecD b4288 0.21 +2.9 4,509,690 + fecD b4288 0.22 +0.7 4,509,698 - fecD b4288 0.23 -0.4 4,509,698 - fecD b4288 0.23 +3.8 4,509,821 - fecD b4288 0.36 +1.9 4,509,909 + fecD b4288 0.45 +0.9 4,509,926 + fecD b4288 0.46 +2.1 4,510,001 + fecD b4288 0.54 -1.4 4,510,028 - fecD b4288 0.57 +0.8 4,510,102 + fecD b4288 0.65 +2.1 4,510,118 + fecD b4288 0.67 +2.6 4,510,118 + fecD b4288 0.67 -0.4 4,510,143 + fecD b4288 0.69 +1.5 4,510,143 + fecD b4288 0.69 +2.6 4,510,143 + fecD b4288 0.69 +3.9 4,510,170 + fecD b4288 0.72 +2.6 4,510,170 + fecD b4288 0.72 +1.1 4,510,178 - fecD b4288 0.73 +2.0 4,510,203 - fecD b4288 0.75 +0.4 4,510,203 - fecD b4288 0.75 +1.7 4,510,212 - fecD b4288 0.76 +1.4 4,510,255 + fecD b4288 0.81 +1.6 4,510,285 - fecD b4288 0.84 +0.5 4,510,285 - fecD b4288 0.84 +1.6 4,510,302 - fecD b4288 0.86 +2.3 4,510,302 - fecD b4288 0.86 +1.1 4,510,353 + +0.6 4,510,376 + +0.8 4,510,376 + +3.4 4,510,381 + +1.3 4,510,384 - +1.1 4,510,401 + +1.7 4,510,401 - +1.1 4,510,410 - +0.8 4,510,410 - +1.9 4,510,471 + +2.3 4,510,507 + +1.5 4,510,546 - fecC b4289 0.11 +2.1 4,510,546 - fecC b4289 0.11 +1.9 4,510,578 + fecC b4289 0.14 +0.8 4,510,580 - fecC b4289 0.15 +1.1 4,510,581 - fecC b4289 0.15 +1.7 4,510,617 - fecC b4289 0.18 +2.4 4,510,642 - fecC b4289 0.21 +1.8 4,510,642 - fecC b4289 0.21 +1.8 4,510,685 - fecC b4289 0.25 +0.6 4,510,687 - fecC b4289 0.25 +1.6 4,510,692 - fecC b4289 0.26 +0.8 4,510,702 - fecC b4289 0.27 +2.3 4,510,702 - fecC b4289 0.27 +2.3 4,510,707 - fecC b4289 0.27 +2.7 4,510,711 + fecC b4289 0.28 +1.8 4,510,729 - fecC b4289 0.30 -0.4 4,510,743 - fecC b4289 0.31 +1.6 4,510,745 + fecC b4289 0.31 +0.4 4,510,745 + fecC b4289 0.31 +2.0 4,510,748 + fecC b4289 0.31 +2.1 4,510,748 + fecC b4289 0.31 +2.7 4,510,750 - fecC b4289 0.32 +1.6 4,510,750 - fecC b4289 0.32 +1.9 4,510,783 - fecC b4289 0.35 +1.4 4,510,800 + fecC b4289 0.37 +2.1 4,510,805 - fecC b4289 0.37 -0.4 4,510,819 - fecC b4289 0.39 +1.7 4,510,821 - fecC b4289 0.39 +2.9 4,510,836 + fecC b4289 0.40 +2.0 4,510,836 - fecC b4289 0.40 +2.0 4,510,836 - fecC b4289 0.40 +0.6 4,510,852 - fecC b4289 0.42 -0.0 4,510,868 + fecC b4289 0.43 -0.8 4,510,979 + fecC b4289 0.55 +1.8 4,510,979 + fecC b4289 0.55 +1.8 4,511,022 + fecC b4289 0.59 +1.8 4,511,022 + fecC b4289 0.59 +3.4 4,511,080 - fecC b4289 0.65 +0.6 4,511,080 - fecC b4289 0.65 +2.9 4,511,081 - fecC b4289 0.65 +0.8 4,511,090 + fecC b4289 0.66 +0.6 4,511,121 + fecC b4289 0.69 +1.1 4,511,121 + fecC b4289 0.69 +2.0 4,511,153 + fecC b4289 0.72 +2.1 4,511,153 + fecC b4289 0.72 +2.4 4,511,153 + fecC b4289 0.72 +2.7 4,511,161 - fecC b4289 0.73 +1.1 4,511,192 - fecC b4289 0.76 +2.0 4,511,248 - fecC b4289 0.81 +2.4 4,511,270 + fecC b4289 0.84 -1.0 4,511,270 + fecC b4289 0.84 +1.0 4,511,290 - fecC b4289 0.86 +1.9 4,511,290 - fecC b4289 0.86 +2.3 4,511,293 + fecC b4289 0.86 +0.9 4,511,293 + fecC b4289 0.86 +2.0 4,511,339 + +2.0 4,511,403 - +1.1 4,511,405 + +2.5 4,511,406 - -1.4
Or see this region's nucleotide sequence