Experiment: Chlorite 1.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yjeM and yjeN are separated by 51 nucleotides yjeN and yjeO overlap by 4 nucleotides yjeO and yjeP are separated by 28 nucleotides yjeP and psd are separated by 21 nucleotides
b4156: yjeM - putative transport (VIMSS), at 4,381,862 to 4,383,364
yjeM
b4157: yjeN - hypothetical protein (NCBI), at 4,383,416 to 4,383,730
yjeN
b4158: yjeO - conserved inner membrane protein (NCBI), at 4,383,727 to 4,384,041
yjeO
b4159: yjeP - predicted mechanosensitive channel (NCBI), at 4,384,070 to 4,387,393
yjeP
b4160: psd - phosphatidylserine decarboxylase (NCBI), at 4,387,415 to 4,388,383
psd
Position (kb) 4384
4385
4386
4387
4388 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 4383.123 kb on + strand, within yjeM at 4383.123 kb on + strand, within yjeM at 4383.166 kb on + strand, within yjeM at 4383.219 kb on + strand at 4383.226 kb on + strand at 4383.330 kb on - strand at 4383.377 kb on + strand at 4383.377 kb on + strand at 4383.384 kb on - strand at 4383.403 kb on - strand at 4383.403 kb on - strand at 4383.403 kb on - strand at 4383.423 kb on + strand at 4383.502 kb on + strand, within yjeN at 4383.502 kb on + strand, within yjeN at 4383.503 kb on - strand, within yjeN at 4383.567 kb on - strand, within yjeN at 4383.570 kb on + strand, within yjeN at 4383.582 kb on + strand, within yjeN at 4383.622 kb on + strand, within yjeN at 4383.635 kb on - strand, within yjeN at 4383.727 kb on - strand at 4383.731 kb on - strand at 4383.731 kb on - strand at 4383.748 kb on - strand at 4383.853 kb on + strand, within yjeO at 4383.853 kb on + strand, within yjeO at 4383.858 kb on + strand, within yjeO at 4383.913 kb on + strand, within yjeO at 4384.045 kb on + strand at 4384.140 kb on - strand at 4384.151 kb on + strand at 4384.197 kb on - strand at 4384.197 kb on - strand at 4384.221 kb on + strand at 4384.251 kb on - strand at 4384.251 kb on - strand at 4384.257 kb on - strand at 4384.257 kb on - strand at 4384.268 kb on - strand at 4384.339 kb on - strand at 4384.364 kb on - strand at 4384.403 kb on + strand, within yjeP at 4384.403 kb on + strand, within yjeP at 4384.412 kb on + strand, within yjeP at 4384.412 kb on + strand, within yjeP at 4384.412 kb on + strand, within yjeP at 4384.412 kb on + strand, within yjeP at 4384.412 kb on + strand, within yjeP at 4384.426 kb on - strand, within yjeP at 4384.434 kb on + strand, within yjeP at 4384.434 kb on + strand, within yjeP at 4384.513 kb on + strand, within yjeP at 4384.553 kb on + strand, within yjeP at 4384.553 kb on + strand, within yjeP at 4384.609 kb on + strand, within yjeP at 4384.609 kb on + strand, within yjeP at 4384.651 kb on + strand, within yjeP at 4384.671 kb on - strand, within yjeP at 4384.689 kb on - strand, within yjeP at 4384.710 kb on + strand, within yjeP at 4384.714 kb on - strand, within yjeP at 4384.714 kb on - strand, within yjeP at 4384.718 kb on - strand, within yjeP at 4384.718 kb on - strand, within yjeP at 4384.773 kb on + strand, within yjeP at 4384.773 kb on + strand, within yjeP at 4384.779 kb on + strand, within yjeP at 4384.781 kb on - strand, within yjeP at 4384.793 kb on - strand, within yjeP at 4384.793 kb on - strand, within yjeP at 4384.826 kb on + strand, within yjeP at 4384.832 kb on - strand, within yjeP at 4384.855 kb on + strand, within yjeP at 4384.886 kb on + strand, within yjeP at 4384.913 kb on - strand, within yjeP at 4384.913 kb on - strand, within yjeP at 4384.928 kb on + strand, within yjeP at 4384.928 kb on + strand, within yjeP at 4384.933 kb on + strand, within yjeP at 4384.936 kb on - strand, within yjeP at 4384.936 kb on - strand, within yjeP at 4384.936 kb on - strand, within yjeP at 4385.104 kb on + strand, within yjeP at 4385.126 kb on + strand, within yjeP at 4385.181 kb on - strand, within yjeP at 4385.246 kb on + strand, within yjeP at 4385.261 kb on - strand, within yjeP at 4385.261 kb on - strand, within yjeP at 4385.372 kb on - strand, within yjeP at 4385.391 kb on - strand, within yjeP at 4385.458 kb on + strand, within yjeP at 4385.478 kb on + strand, within yjeP at 4385.493 kb on + strand, within yjeP at 4385.531 kb on + strand, within yjeP at 4385.531 kb on + strand, within yjeP at 4385.546 kb on + strand, within yjeP at 4385.572 kb on + strand, within yjeP at 4385.572 kb on + strand, within yjeP at 4385.588 kb on + strand, within yjeP at 4385.605 kb on - strand, within yjeP at 4385.605 kb on - strand, within yjeP at 4385.615 kb on - strand, within yjeP at 4385.665 kb on + strand, within yjeP at 4385.665 kb on + strand, within yjeP at 4385.665 kb on + strand, within yjeP at 4385.691 kb on + strand, within yjeP at 4385.696 kb on - strand, within yjeP at 4385.792 kb on - strand, within yjeP at 4385.803 kb on - strand, within yjeP at 4385.818 kb on - strand, within yjeP at 4385.844 kb on + strand, within yjeP at 4385.925 kb on + strand, within yjeP at 4385.949 kb on + strand, within yjeP at 4385.974 kb on + strand, within yjeP at 4385.981 kb on + strand, within yjeP at 4385.981 kb on + strand, within yjeP at 4386.007 kb on - strand, within yjeP at 4386.029 kb on - strand, within yjeP at 4386.041 kb on + strand, within yjeP at 4386.050 kb on - strand, within yjeP at 4386.079 kb on - strand, within yjeP at 4386.080 kb on + strand, within yjeP at 4386.099 kb on + strand, within yjeP at 4386.099 kb on + strand, within yjeP at 4386.107 kb on - strand, within yjeP at 4386.126 kb on - strand, within yjeP at 4386.170 kb on - strand, within yjeP at 4386.188 kb on + strand, within yjeP at 4386.188 kb on + strand, within yjeP at 4386.193 kb on - strand, within yjeP at 4386.209 kb on - strand, within yjeP at 4386.230 kb on + strand, within yjeP at 4386.230 kb on + strand, within yjeP at 4386.287 kb on - strand, within yjeP at 4386.296 kb on + strand, within yjeP at 4386.299 kb on - strand, within yjeP at 4386.299 kb on - strand, within yjeP at 4386.399 kb on - strand, within yjeP at 4386.423 kb on + strand, within yjeP at 4386.451 kb on + strand, within yjeP at 4386.451 kb on + strand, within yjeP at 4386.455 kb on + strand, within yjeP at 4386.501 kb on + strand, within yjeP at 4386.504 kb on - strand, within yjeP at 4386.514 kb on - strand, within yjeP at 4386.544 kb on - strand, within yjeP at 4386.544 kb on - strand, within yjeP at 4386.548 kb on + strand, within yjeP at 4386.565 kb on + strand, within yjeP at 4386.565 kb on + strand, within yjeP at 4386.600 kb on - strand, within yjeP at 4386.644 kb on + strand, within yjeP at 4386.644 kb on + strand, within yjeP at 4386.692 kb on - strand, within yjeP at 4386.779 kb on - strand, within yjeP at 4386.829 kb on - strand, within yjeP at 4386.841 kb on + strand, within yjeP at 4386.853 kb on - strand, within yjeP at 4386.861 kb on - strand, within yjeP at 4386.861 kb on - strand, within yjeP at 4386.863 kb on - strand, within yjeP at 4387.015 kb on - strand, within yjeP at 4387.015 kb on - strand, within yjeP at 4387.020 kb on - strand, within yjeP at 4387.025 kb on - strand, within yjeP at 4387.050 kb on - strand, within yjeP at 4387.050 kb on - strand, within yjeP at 4387.115 kb on - strand at 4387.138 kb on - strand at 4387.150 kb on - strand at 4387.155 kb on - strand at 4387.201 kb on + strand at 4387.201 kb on + strand at 4387.250 kb on - strand at 4387.250 kb on - strand at 4387.253 kb on + strand at 4387.260 kb on - strand at 4387.260 kb on - strand at 4387.260 kb on - strand at 4387.270 kb on - strand at 4387.270 kb on - strand at 4387.345 kb on + strand at 4387.345 kb on + strand at 4387.345 kb on + strand at 4387.345 kb on + strand at 4387.353 kb on - strand at 4387.355 kb on - strand at 4387.400 kb on - strand at 4387.413 kb on + strand at 4387.494 kb on + strand at 4387.531 kb on - strand, within psd at 4388.388 kb on + strand at 4388.388 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 1.25 mM remove 4,383,123 + yjeM b4156 0.84 -0.0 4,383,123 + yjeM b4156 0.84 +0.8 4,383,166 + yjeM b4156 0.87 +4.3 4,383,219 + +0.3 4,383,226 + +0.8 4,383,330 - +2.2 4,383,377 + -0.4 4,383,377 + -0.0 4,383,384 - +1.2 4,383,403 - -0.9 4,383,403 - -1.0 4,383,403 - -0.4 4,383,423 + -2.0 4,383,502 + yjeN b4157 0.27 +0.2 4,383,502 + yjeN b4157 0.27 -2.2 4,383,503 - yjeN b4157 0.28 +0.6 4,383,567 - yjeN b4157 0.48 -0.2 4,383,570 + yjeN b4157 0.49 +1.4 4,383,582 + yjeN b4157 0.53 +0.7 4,383,622 + yjeN b4157 0.65 +2.6 4,383,635 - yjeN b4157 0.70 +0.3 4,383,727 - -0.9 4,383,731 - -1.4 4,383,731 - -1.2 4,383,748 - +0.4 4,383,853 + yjeO b4158 0.40 -0.4 4,383,853 + yjeO b4158 0.40 +2.8 4,383,858 + yjeO b4158 0.42 -0.4 4,383,913 + yjeO b4158 0.59 -0.0 4,384,045 + +1.0 4,384,140 - +1.1 4,384,151 + +1.0 4,384,197 - +0.6 4,384,197 - +2.3 4,384,221 + -0.0 4,384,251 - +1.3 4,384,251 - +3.8 4,384,257 - +1.6 4,384,257 - +2.5 4,384,268 - -0.4 4,384,339 - +1.4 4,384,364 - +0.2 4,384,403 + yjeP b4159 0.10 +0.3 4,384,403 + yjeP b4159 0.10 +0.9 4,384,412 + yjeP b4159 0.10 -0.4 4,384,412 + yjeP b4159 0.10 +0.1 4,384,412 + yjeP b4159 0.10 -1.0 4,384,412 + yjeP b4159 0.10 -0.4 4,384,412 + yjeP b4159 0.10 +1.0 4,384,426 - yjeP b4159 0.11 +1.4 4,384,434 + yjeP b4159 0.11 +1.6 4,384,434 + yjeP b4159 0.11 -0.2 4,384,513 + yjeP b4159 0.13 -1.4 4,384,553 + yjeP b4159 0.15 +1.2 4,384,553 + yjeP b4159 0.15 +0.6 4,384,609 + yjeP b4159 0.16 +0.6 4,384,609 + yjeP b4159 0.16 +3.4 4,384,651 + yjeP b4159 0.17 +0.8 4,384,671 - yjeP b4159 0.18 +0.9 4,384,689 - yjeP b4159 0.19 +0.3 4,384,710 + yjeP b4159 0.19 +1.1 4,384,714 - yjeP b4159 0.19 +2.2 4,384,714 - yjeP b4159 0.19 +0.3 4,384,718 - yjeP b4159 0.19 +1.0 4,384,718 - yjeP b4159 0.19 -1.4 4,384,773 + yjeP b4159 0.21 +0.8 4,384,773 + yjeP b4159 0.21 -1.7 4,384,779 + yjeP b4159 0.21 +1.3 4,384,781 - yjeP b4159 0.21 -0.6 4,384,793 - yjeP b4159 0.22 +1.8 4,384,793 - yjeP b4159 0.22 +2.2 4,384,826 + yjeP b4159 0.23 +0.6 4,384,832 - yjeP b4159 0.23 +0.3 4,384,855 + yjeP b4159 0.24 +0.3 4,384,886 + yjeP b4159 0.25 +0.9 4,384,913 - yjeP b4159 0.25 +0.6 4,384,913 - yjeP b4159 0.25 +1.6 4,384,928 + yjeP b4159 0.26 +0.3 4,384,928 + yjeP b4159 0.26 +0.6 4,384,933 + yjeP b4159 0.26 -0.4 4,384,936 - yjeP b4159 0.26 +2.0 4,384,936 - yjeP b4159 0.26 -0.4 4,384,936 - yjeP b4159 0.26 +1.0 4,385,104 + yjeP b4159 0.31 +0.3 4,385,126 + yjeP b4159 0.32 +0.9 4,385,181 - yjeP b4159 0.33 -0.2 4,385,246 + yjeP b4159 0.35 -0.7 4,385,261 - yjeP b4159 0.36 +0.2 4,385,261 - yjeP b4159 0.36 -0.4 4,385,372 - yjeP b4159 0.39 +3.0 4,385,391 - yjeP b4159 0.40 +0.8 4,385,458 + yjeP b4159 0.42 +1.5 4,385,478 + yjeP b4159 0.42 -1.0 4,385,493 + yjeP b4159 0.43 -1.0 4,385,531 + yjeP b4159 0.44 +0.0 4,385,531 + yjeP b4159 0.44 +1.5 4,385,546 + yjeP b4159 0.44 +0.0 4,385,572 + yjeP b4159 0.45 -0.4 4,385,572 + yjeP b4159 0.45 +1.0 4,385,588 + yjeP b4159 0.46 -1.0 4,385,605 - yjeP b4159 0.46 +1.0 4,385,605 - yjeP b4159 0.46 +0.5 4,385,615 - yjeP b4159 0.46 +2.6 4,385,665 + yjeP b4159 0.48 +2.4 4,385,665 + yjeP b4159 0.48 +4.0 4,385,665 + yjeP b4159 0.48 +0.9 4,385,691 + yjeP b4159 0.49 +1.7 4,385,696 - yjeP b4159 0.49 -1.0 4,385,792 - yjeP b4159 0.52 +0.6 4,385,803 - yjeP b4159 0.52 +0.7 4,385,818 - yjeP b4159 0.53 +0.2 4,385,844 + yjeP b4159 0.53 +0.6 4,385,925 + yjeP b4159 0.56 +2.2 4,385,949 + yjeP b4159 0.57 +0.9 4,385,974 + yjeP b4159 0.57 +3.2 4,385,981 + yjeP b4159 0.57 +1.6 4,385,981 + yjeP b4159 0.57 +1.1 4,386,007 - yjeP b4159 0.58 -0.2 4,386,029 - yjeP b4159 0.59 +2.8 4,386,041 + yjeP b4159 0.59 -0.4 4,386,050 - yjeP b4159 0.60 +0.6 4,386,079 - yjeP b4159 0.60 +1.3 4,386,080 + yjeP b4159 0.60 +0.6 4,386,099 + yjeP b4159 0.61 +2.6 4,386,099 + yjeP b4159 0.61 +4.3 4,386,107 - yjeP b4159 0.61 +0.1 4,386,126 - yjeP b4159 0.62 -0.0 4,386,170 - yjeP b4159 0.63 +1.0 4,386,188 + yjeP b4159 0.64 +1.6 4,386,188 + yjeP b4159 0.64 +0.2 4,386,193 - yjeP b4159 0.64 -1.7 4,386,209 - yjeP b4159 0.64 +0.2 4,386,230 + yjeP b4159 0.65 +1.6 4,386,230 + yjeP b4159 0.65 -1.4 4,386,287 - yjeP b4159 0.67 +0.6 4,386,296 + yjeP b4159 0.67 +0.7 4,386,299 - yjeP b4159 0.67 +2.2 4,386,299 - yjeP b4159 0.67 +1.6 4,386,399 - yjeP b4159 0.70 +2.2 4,386,423 + yjeP b4159 0.71 -0.0 4,386,451 + yjeP b4159 0.72 -0.4 4,386,451 + yjeP b4159 0.72 -0.0 4,386,455 + yjeP b4159 0.72 -2.0 4,386,501 + yjeP b4159 0.73 +2.1 4,386,504 - yjeP b4159 0.73 +1.6 4,386,514 - yjeP b4159 0.74 +0.6 4,386,544 - yjeP b4159 0.74 +2.9 4,386,544 - yjeP b4159 0.74 +0.8 4,386,548 + yjeP b4159 0.75 -0.0 4,386,565 + yjeP b4159 0.75 +0.8 4,386,565 + yjeP b4159 0.75 +3.0 4,386,600 - yjeP b4159 0.76 +1.7 4,386,644 + yjeP b4159 0.77 +2.1 4,386,644 + yjeP b4159 0.77 -0.4 4,386,692 - yjeP b4159 0.79 +0.7 4,386,779 - yjeP b4159 0.81 +1.5 4,386,829 - yjeP b4159 0.83 +0.6 4,386,841 + yjeP b4159 0.83 -0.7 4,386,853 - yjeP b4159 0.84 +0.6 4,386,861 - yjeP b4159 0.84 +0.3 4,386,861 - yjeP b4159 0.84 +1.3 4,386,863 - yjeP b4159 0.84 +1.3 4,387,015 - yjeP b4159 0.89 +1.4 4,387,015 - yjeP b4159 0.89 -1.0 4,387,020 - yjeP b4159 0.89 -0.9 4,387,025 - yjeP b4159 0.89 +0.7 4,387,050 - yjeP b4159 0.90 -0.4 4,387,050 - yjeP b4159 0.90 +0.6 4,387,115 - -0.2 4,387,138 - +2.9 4,387,150 - +0.8 4,387,155 - -0.6 4,387,201 + +1.6 4,387,201 + +1.0 4,387,250 - -0.4 4,387,250 - +1.8 4,387,253 + +0.2 4,387,260 - +3.0 4,387,260 - +0.7 4,387,260 - +2.0 4,387,270 - -0.4 4,387,270 - +1.6 4,387,345 + +1.4 4,387,345 + +0.1 4,387,345 + +0.8 4,387,345 + +2.7 4,387,353 - +0.6 4,387,355 - +1.2 4,387,400 - -1.0 4,387,413 + -0.1 4,387,494 + +1.0 4,387,531 - psd b4160 0.12 -0.0 4,388,388 + +0.3 4,388,388 + -0.6
Or see this region's nucleotide sequence