Strain Fitness in Escherichia coli BW25113 around b3137
Experiment: Chlorite 1.25 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Chlorite 1.25 mM |
---|---|---|---|---|---|
remove | |||||
3,280,263 | - | agaS | b3136 | 0.23 | -1.1 |
3,280,263 | - | agaS | b3136 | 0.23 | +1.5 |
3,280,293 | - | agaS | b3136 | 0.26 | -0.5 |
3,280,293 | - | agaS | b3136 | 0.26 | +0.9 |
3,280,529 | - | agaS | b3136 | 0.46 | +0.2 |
3,280,811 | + | agaS | b3136 | 0.70 | -1.1 |
3,280,837 | - | agaS | b3136 | 0.73 | +0.1 |
3,280,917 | + | agaS | b3136 | 0.80 | +0.5 |
3,281,155 | - | +0.1 | |||
3,281,225 | - | +0.7 | |||
3,281,244 | + | +0.1 | |||
3,281,322 | - | kbaY | b3137 | 0.18 | -0.2 |
3,281,367 | - | kbaY | b3137 | 0.23 | +0.5 |
3,281,371 | + | kbaY | b3137 | 0.24 | +0.6 |
3,281,451 | - | kbaY | b3137 | 0.33 | +0.4 |
3,281,583 | + | kbaY | b3137 | 0.49 | -0.1 |
3,281,640 | - | kbaY | b3137 | 0.55 | -0.5 |
3,281,689 | + | kbaY | b3137 | 0.61 | +0.5 |
3,281,689 | + | kbaY | b3137 | 0.61 | +0.3 |
3,281,699 | + | kbaY | b3137 | 0.62 | +0.7 |
3,281,701 | + | kbaY | b3137 | 0.62 | +0.0 |
3,281,708 | + | kbaY | b3137 | 0.63 | -0.3 |
3,281,708 | + | kbaY | b3137 | 0.63 | -0.1 |
3,281,708 | + | kbaY | b3137 | 0.63 | +2.1 |
3,281,710 | + | kbaY | b3137 | 0.63 | +1.7 |
3,281,710 | + | kbaY | b3137 | 0.63 | +1.5 |
3,281,713 | + | kbaY | b3137 | 0.64 | -0.2 |
3,281,713 | + | kbaY | b3137 | 0.64 | +0.5 |
3,281,764 | + | kbaY | b3137 | 0.70 | +0.5 |
3,281,772 | + | kbaY | b3137 | 0.70 | +1.8 |
3,281,772 | + | kbaY | b3137 | 0.70 | +1.5 |
3,281,775 | + | kbaY | b3137 | 0.71 | +1.7 |
3,281,775 | + | kbaY | b3137 | 0.71 | +0.5 |
3,281,780 | + | kbaY | b3137 | 0.71 | -1.3 |
3,281,780 | + | kbaY | b3137 | 0.71 | -0.1 |
3,281,780 | + | kbaY | b3137 | 0.71 | -1.8 |
3,281,780 | + | kbaY | b3137 | 0.71 | -2.5 |
3,281,782 | - | kbaY | b3137 | 0.72 | -0.1 |
3,281,785 | + | kbaY | b3137 | 0.72 | -0.8 |
3,281,785 | - | kbaY | b3137 | 0.72 | +0.9 |
3,281,788 | - | kbaY | b3137 | 0.72 | -0.1 |
3,281,828 | + | kbaY | b3137 | 0.77 | +0.2 |
3,281,854 | + | kbaY | b3137 | 0.80 | -1.8 |
3,281,864 | + | kbaY | b3137 | 0.81 | +0.8 |
3,281,872 | - | kbaY | b3137 | 0.82 | +1.5 |
3,281,891 | + | kbaY | b3137 | 0.84 | -0.5 |
3,281,896 | + | kbaY | b3137 | 0.85 | -1.5 |
3,281,896 | + | kbaY | b3137 | 0.85 | +1.5 |
3,281,896 | + | kbaY | b3137 | 0.85 | +0.5 |
3,281,896 | + | kbaY | b3137 | 0.85 | +0.1 |
3,281,920 | + | kbaY | b3137 | 0.88 | +0.0 |
3,281,922 | + | kbaY | b3137 | 0.88 | +2.5 |
3,281,937 | + | kbaY | b3137 | 0.90 | +0.7 |
3,281,947 | + | +0.9 | |||
3,281,947 | + | -1.5 | |||
3,281,965 | + | +1.5 | |||
3,282,046 | + | -0.1 | |||
3,282,046 | + | -1.1 | |||
3,282,068 | + | -0.9 | |||
3,282,068 | + | -0.5 | |||
3,282,080 | + | -0.5 | |||
3,282,080 | + | +0.1 | |||
3,282,193 | - | +0.2 | |||
3,282,228 | - | +0.5 | |||
3,282,228 | - | -0.1 | |||
3,282,230 | - | -1.1 | |||
3,282,230 | - | -0.0 | |||
3,282,230 | - | -1.0 | |||
3,282,235 | - | -0.2 | |||
3,282,238 | - | +2.1 | |||
3,282,245 | - | agaB | b3138 | 0.11 | +0.5 |
3,282,245 | - | agaB | b3138 | 0.11 | +0.5 |
3,282,251 | - | agaB | b3138 | 0.12 | +0.2 |
3,282,251 | - | agaB | b3138 | 0.12 | +1.7 |
3,282,251 | - | agaB | b3138 | 0.12 | -0.4 |
3,282,257 | + | agaB | b3138 | 0.14 | +0.7 |
3,282,257 | + | agaB | b3138 | 0.14 | +0.8 |
3,282,257 | + | agaB | b3138 | 0.14 | +0.2 |
3,282,258 | + | agaB | b3138 | 0.14 | +1.2 |
3,282,260 | - | agaB | b3138 | 0.14 | +1.7 |
3,282,265 | - | agaB | b3138 | 0.15 | +0.2 |
3,282,265 | - | agaB | b3138 | 0.15 | +1.2 |
3,282,265 | - | agaB | b3138 | 0.15 | +1.3 |
3,282,271 | - | agaB | b3138 | 0.17 | +1.2 |
3,282,271 | - | agaB | b3138 | 0.17 | -1.5 |
3,282,271 | - | agaB | b3138 | 0.17 | +0.9 |
3,282,271 | - | agaB | b3138 | 0.17 | +1.1 |
3,282,275 | - | agaB | b3138 | 0.17 | +1.0 |
3,282,285 | - | agaB | b3138 | 0.19 | -1.8 |
3,282,287 | + | agaB | b3138 | 0.20 | -0.5 |
3,282,295 | - | agaB | b3138 | 0.22 | +2.2 |
3,282,312 | - | agaB | b3138 | 0.25 | -1.5 |
3,282,322 | + | agaB | b3138 | 0.27 | -0.5 |
3,282,410 | + | agaB | b3138 | 0.46 | +0.7 |
3,282,487 | + | agaB | b3138 | 0.62 | +0.6 |
3,282,487 | + | agaB | b3138 | 0.62 | +0.3 |
3,282,558 | + | agaB | b3138 | 0.77 | +0.6 |
3,282,570 | + | agaB | b3138 | 0.79 | -0.2 |
3,282,570 | + | agaB | b3138 | 0.79 | +0.2 |
3,282,570 | + | agaB | b3138 | 0.79 | -0.9 |
3,282,579 | + | agaB | b3138 | 0.81 | +0.5 |
3,282,629 | + | -0.7 | |||
3,282,676 | - | +1.1 | |||
3,282,676 | - | +1.3 | |||
3,282,744 | - | +0.5 | |||
3,282,836 | - | agaC | b3139 | 0.16 | -1.1 |
3,282,836 | - | agaC | b3139 | 0.16 | +0.5 |
3,282,852 | - | agaC | b3139 | 0.18 | +0.5 |
3,282,852 | - | agaC | b3139 | 0.18 | -0.3 |
3,282,862 | - | agaC | b3139 | 0.19 | +0.2 |
3,282,862 | - | agaC | b3139 | 0.19 | +1.5 |
3,282,870 | + | agaC | b3139 | 0.20 | -1.1 |
3,282,877 | - | agaC | b3139 | 0.21 | +0.5 |
3,282,878 | - | agaC | b3139 | 0.21 | +2.1 |
3,282,903 | - | agaC | b3139 | 0.24 | +0.1 |
3,282,911 | - | agaC | b3139 | 0.25 | +0.1 |
3,282,912 | - | agaC | b3139 | 0.25 | -0.5 |
3,282,917 | - | agaC | b3139 | 0.26 | -0.5 |
3,282,917 | - | agaC | b3139 | 0.26 | +0.8 |
3,282,920 | - | agaC | b3139 | 0.26 | +0.1 |
3,282,920 | - | agaC | b3139 | 0.26 | -0.5 |
3,282,920 | - | agaC | b3139 | 0.26 | +0.5 |
3,282,920 | - | agaC | b3139 | 0.26 | +0.1 |
3,282,952 | - | agaC | b3139 | 0.30 | -0.6 |
3,282,957 | + | agaC | b3139 | 0.31 | -0.7 |
3,282,957 | + | agaC | b3139 | 0.31 | +2.1 |
3,282,960 | + | agaC | b3139 | 0.31 | +1.0 |
3,282,965 | - | agaC | b3139 | 0.32 | +0.7 |
3,282,966 | + | agaC | b3139 | 0.32 | +1.2 |
3,282,967 | + | agaC | b3139 | 0.32 | -1.5 |
3,282,967 | + | agaC | b3139 | 0.32 | +1.4 |
3,282,967 | + | agaC | b3139 | 0.32 | -1.3 |
3,282,967 | + | agaC | b3139 | 0.32 | +2.6 |
3,282,967 | + | agaC | b3139 | 0.32 | +1.2 |
3,282,967 | + | agaC | b3139 | 0.32 | +1.5 |
3,282,967 | + | agaC | b3139 | 0.32 | -0.5 |
3,282,967 | + | agaC | b3139 | 0.32 | +0.5 |
3,282,967 | + | agaC | b3139 | 0.32 | +1.5 |
3,282,967 | + | agaC | b3139 | 0.32 | +0.5 |
3,282,967 | + | agaC | b3139 | 0.32 | -0.5 |
3,282,967 | + | agaC | b3139 | 0.32 | +0.4 |
3,282,975 | - | agaC | b3139 | 0.33 | -0.2 |
3,282,975 | - | agaC | b3139 | 0.33 | +0.2 |
3,282,975 | - | agaC | b3139 | 0.33 | -0.8 |
3,282,975 | - | agaC | b3139 | 0.33 | +0.2 |
3,282,975 | - | agaC | b3139 | 0.33 | +0.7 |
3,282,975 | - | agaC | b3139 | 0.33 | +2.0 |
3,282,975 | - | agaC | b3139 | 0.33 | -0.5 |
3,282,975 | - | agaC | b3139 | 0.33 | -0.8 |
3,282,975 | - | agaC | b3139 | 0.33 | -0.5 |
3,282,975 | - | agaC | b3139 | 0.33 | +0.5 |
3,282,975 | - | agaC | b3139 | 0.33 | -1.1 |
3,282,975 | - | agaC | b3139 | 0.33 | +0.7 |
3,282,975 | - | agaC | b3139 | 0.33 | -0.5 |
3,282,975 | - | agaC | b3139 | 0.33 | -0.2 |
3,282,975 | - | agaC | b3139 | 0.33 | -1.2 |
3,283,025 | + | agaC | b3139 | 0.40 | +0.5 |
Or see this region's nucleotide sequence