Experiment: Chlorite 1.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yeiG and cirA are separated by 31 nucleotides cirA and lysP are separated by 293 nucleotides
b2154: yeiG - predicted esterase (NCBI), at 2,241,932 to 2,242,768
yeiG
b2155: cirA - ferric iron-catecholate outer membrane transporter (NCBI), at 2,242,800 to 2,244,791
cirA
b2156: lysP - lysine transporter (NCBI), at 2,245,085 to 2,246,554
lysP
Position (kb)
2242
2243
2244
2245 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2241.884 kb on - strand at 2241.884 kb on - strand at 2242.006 kb on - strand at 2242.045 kb on + strand, within yeiG at 2242.062 kb on - strand, within yeiG at 2242.062 kb on - strand, within yeiG at 2242.149 kb on + strand, within yeiG at 2242.453 kb on + strand, within yeiG at 2242.453 kb on + strand, within yeiG at 2242.456 kb on - strand, within yeiG at 2242.504 kb on + strand, within yeiG at 2242.626 kb on - strand, within yeiG at 2242.719 kb on + strand at 2242.719 kb on + strand at 2242.753 kb on + strand at 2242.761 kb on - strand at 2242.761 kb on - strand at 2242.890 kb on + strand at 2242.898 kb on - strand at 2242.921 kb on + strand at 2242.921 kb on + strand at 2242.942 kb on + strand at 2242.967 kb on + strand at 2243.005 kb on + strand, within cirA at 2243.005 kb on + strand, within cirA at 2243.143 kb on - strand, within cirA at 2243.202 kb on - strand, within cirA at 2243.202 kb on - strand, within cirA at 2243.243 kb on - strand, within cirA at 2243.295 kb on + strand, within cirA at 2243.417 kb on - strand, within cirA at 2243.417 kb on - strand, within cirA at 2243.561 kb on - strand, within cirA at 2243.603 kb on - strand, within cirA at 2243.616 kb on - strand, within cirA at 2243.616 kb on - strand, within cirA at 2243.931 kb on - strand, within cirA at 2243.931 kb on - strand, within cirA at 2243.967 kb on - strand, within cirA at 2244.152 kb on - strand, within cirA at 2244.152 kb on - strand, within cirA at 2244.389 kb on + strand, within cirA at 2244.389 kb on + strand, within cirA at 2244.394 kb on - strand, within cirA at 2244.394 kb on - strand, within cirA at 2244.436 kb on - strand, within cirA at 2244.557 kb on + strand, within cirA at 2244.582 kb on - strand, within cirA at 2244.629 kb on - strand at 2244.708 kb on + strand at 2244.784 kb on - strand at 2244.784 kb on - strand at 2244.800 kb on + strand at 2244.800 kb on + strand at 2244.856 kb on - strand at 2245.116 kb on + strand at 2245.178 kb on - strand at 2245.178 kb on - strand at 2245.196 kb on - strand at 2245.319 kb on + strand, within lysP at 2245.319 kb on + strand, within lysP at 2245.319 kb on + strand, within lysP at 2245.330 kb on + strand, within lysP at 2245.386 kb on - strand, within lysP at 2245.386 kb on - strand, within lysP at 2245.442 kb on - strand, within lysP at 2245.442 kb on - strand, within lysP at 2245.483 kb on + strand, within lysP at 2245.532 kb on - strand, within lysP at 2245.568 kb on - strand, within lysP at 2245.581 kb on + strand, within lysP at 2245.588 kb on - strand, within lysP at 2245.609 kb on - strand, within lysP at 2245.611 kb on - strand, within lysP at 2245.611 kb on - strand, within lysP at 2245.706 kb on - strand, within lysP at 2245.721 kb on + strand, within lysP
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 1.25 mM remove 2,241,884 - -1.3 2,241,884 - +0.0 2,242,006 - -1.1 2,242,045 + yeiG b2154 0.14 -0.8 2,242,062 - yeiG b2154 0.16 +2.3 2,242,062 - yeiG b2154 0.16 -0.6 2,242,149 + yeiG b2154 0.26 +0.0 2,242,453 + yeiG b2154 0.62 -1.0 2,242,453 + yeiG b2154 0.62 +0.0 2,242,456 - yeiG b2154 0.63 +1.0 2,242,504 + yeiG b2154 0.68 +0.7 2,242,626 - yeiG b2154 0.83 +0.7 2,242,719 + +1.0 2,242,719 + +1.3 2,242,753 + +0.0 2,242,761 - +0.7 2,242,761 - -1.6 2,242,890 + -0.8 2,242,898 - -0.5 2,242,921 + +1.7 2,242,921 + -2.3 2,242,942 + +0.0 2,242,967 + +0.6 2,243,005 + cirA b2155 0.10 +0.3 2,243,005 + cirA b2155 0.10 +0.0 2,243,143 - cirA b2155 0.17 -2.0 2,243,202 - cirA b2155 0.20 +0.8 2,243,202 - cirA b2155 0.20 -1.6 2,243,243 - cirA b2155 0.22 -2.6 2,243,295 + cirA b2155 0.25 +0.3 2,243,417 - cirA b2155 0.31 +0.5 2,243,417 - cirA b2155 0.31 -2.3 2,243,561 - cirA b2155 0.38 +0.0 2,243,603 - cirA b2155 0.40 -1.6 2,243,616 - cirA b2155 0.41 +0.0 2,243,616 - cirA b2155 0.41 -1.6 2,243,931 - cirA b2155 0.57 -1.0 2,243,931 - cirA b2155 0.57 -1.4 2,243,967 - cirA b2155 0.59 -0.5 2,244,152 - cirA b2155 0.68 +0.6 2,244,152 - cirA b2155 0.68 +1.0 2,244,389 + cirA b2155 0.80 -1.0 2,244,389 + cirA b2155 0.80 +0.2 2,244,394 - cirA b2155 0.80 -0.6 2,244,394 - cirA b2155 0.80 -1.0 2,244,436 - cirA b2155 0.82 +0.4 2,244,557 + cirA b2155 0.88 -0.1 2,244,582 - cirA b2155 0.89 -2.0 2,244,629 - +1.0 2,244,708 + +1.2 2,244,784 - +0.2 2,244,784 - +0.8 2,244,800 + -1.0 2,244,800 + -1.0 2,244,856 - -0.2 2,245,116 + +1.4 2,245,178 - +1.2 2,245,178 - -1.0 2,245,196 - -3.3 2,245,319 + lysP b2156 0.16 +1.6 2,245,319 + lysP b2156 0.16 -1.6 2,245,319 + lysP b2156 0.16 +0.0 2,245,330 + lysP b2156 0.17 +0.8 2,245,386 - lysP b2156 0.20 +0.2 2,245,386 - lysP b2156 0.20 +0.5 2,245,442 - lysP b2156 0.24 -2.0 2,245,442 - lysP b2156 0.24 -0.6 2,245,483 + lysP b2156 0.27 -0.1 2,245,532 - lysP b2156 0.30 +0.4 2,245,568 - lysP b2156 0.33 -1.3 2,245,581 + lysP b2156 0.34 +0.8 2,245,588 - lysP b2156 0.34 +0.0 2,245,609 - lysP b2156 0.36 -0.1 2,245,611 - lysP b2156 0.36 -0.4 2,245,611 - lysP b2156 0.36 -1.6 2,245,706 - lysP b2156 0.42 +0.7 2,245,721 + lysP b2156 0.43 +0.4
Or see this region's nucleotide sequence