Experiment: Chlorite 0.4 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt proW and proX are separated by 57 nucleotides proX and ygaY are separated by 191 nucleotides
b2678: proW - glycine betaine transporter subunit (NCBI), at 2,804,032 to 2,805,096
proW
b2679: proX - glycine betaine transporter subunit (NCBI), at 2,805,154 to 2,806,146
proX
b2681: ygaY - predicted transporter (pseudogene) (RefSeq), at 2,806,338 to 2,807,515
ygaY
Position (kb)
2805
2806
2807 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2804.189 kb on + strand, within proW at 2804.228 kb on - strand, within proW at 2804.228 kb on - strand, within proW at 2804.239 kb on + strand, within proW at 2804.242 kb on + strand, within proW at 2804.242 kb on + strand, within proW at 2804.285 kb on - strand, within proW at 2804.285 kb on - strand, within proW at 2804.350 kb on - strand, within proW at 2804.458 kb on - strand, within proW at 2804.471 kb on - strand, within proW at 2804.471 kb on - strand, within proW at 2804.482 kb on - strand, within proW at 2804.482 kb on - strand, within proW at 2804.484 kb on + strand, within proW at 2804.586 kb on - strand, within proW at 2804.656 kb on - strand, within proW at 2804.778 kb on + strand, within proW at 2804.778 kb on + strand, within proW at 2804.794 kb on + strand, within proW at 2804.843 kb on + strand, within proW at 2804.866 kb on - strand, within proW at 2804.910 kb on - strand, within proW at 2805.096 kb on + strand at 2805.179 kb on - strand at 2805.368 kb on - strand, within proX at 2805.477 kb on + strand, within proX at 2805.689 kb on - strand, within proX at 2805.713 kb on + strand, within proX at 2805.721 kb on - strand, within proX at 2805.751 kb on - strand, within proX at 2805.891 kb on - strand, within proX at 2805.891 kb on - strand, within proX at 2805.922 kb on + strand, within proX at 2806.078 kb on + strand at 2806.135 kb on + strand at 2806.135 kb on + strand at 2806.228 kb on + strand at 2806.358 kb on + strand at 2806.410 kb on + strand at 2806.410 kb on + strand at 2806.418 kb on + strand at 2806.420 kb on + strand at 2806.430 kb on + strand at 2806.491 kb on - strand, within ygaY at 2806.608 kb on - strand, within ygaY at 2806.745 kb on + strand, within ygaY at 2806.753 kb on - strand, within ygaY at 2806.753 kb on - strand, within ygaY at 2806.759 kb on + strand, within ygaY at 2806.759 kb on + strand, within ygaY at 2806.760 kb on + strand, within ygaY at 2806.870 kb on + strand, within ygaY at 2806.870 kb on + strand, within ygaY at 2806.876 kb on - strand, within ygaY at 2806.876 kb on - strand, within ygaY at 2806.925 kb on - strand, within ygaY at 2807.086 kb on + strand, within ygaY at 2807.111 kb on - strand, within ygaY at 2807.111 kb on - strand, within ygaY
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.4 mM remove 2,804,189 + proW b2678 0.15 +0.8 2,804,228 - proW b2678 0.18 -1.2 2,804,228 - proW b2678 0.18 +0.4 2,804,239 + proW b2678 0.19 +0.4 2,804,242 + proW b2678 0.20 -0.2 2,804,242 + proW b2678 0.20 -0.0 2,804,285 - proW b2678 0.24 -0.2 2,804,285 - proW b2678 0.24 +1.1 2,804,350 - proW b2678 0.30 -1.8 2,804,458 - proW b2678 0.40 +0.3 2,804,471 - proW b2678 0.41 -0.9 2,804,471 - proW b2678 0.41 -1.2 2,804,482 - proW b2678 0.42 +0.8 2,804,482 - proW b2678 0.42 -0.2 2,804,484 + proW b2678 0.42 +0.2 2,804,586 - proW b2678 0.52 -0.2 2,804,656 - proW b2678 0.59 -0.8 2,804,778 + proW b2678 0.70 -0.7 2,804,778 + proW b2678 0.70 +1.8 2,804,794 + proW b2678 0.72 +0.2 2,804,843 + proW b2678 0.76 -0.6 2,804,866 - proW b2678 0.78 +0.6 2,804,910 - proW b2678 0.82 +1.0 2,805,096 + -0.2 2,805,179 - +0.8 2,805,368 - proX b2679 0.22 -1.8 2,805,477 + proX b2679 0.33 -2.2 2,805,689 - proX b2679 0.54 -0.2 2,805,713 + proX b2679 0.56 -1.5 2,805,721 - proX b2679 0.57 -0.2 2,805,751 - proX b2679 0.60 -1.2 2,805,891 - proX b2679 0.74 -0.2 2,805,891 - proX b2679 0.74 +0.2 2,805,922 + proX b2679 0.77 -0.8 2,806,078 + +0.1 2,806,135 + -0.2 2,806,135 + -1.2 2,806,228 + +0.8 2,806,358 + -1.2 2,806,410 + -0.2 2,806,410 + +1.6 2,806,418 + +1.4 2,806,420 + -0.6 2,806,430 + -0.4 2,806,491 - ygaY b2681 0.13 +0.1 2,806,608 - ygaY b2681 0.23 -0.4 2,806,745 + ygaY b2681 0.35 +0.6 2,806,753 - ygaY b2681 0.35 +0.8 2,806,753 - ygaY b2681 0.35 +0.2 2,806,759 + ygaY b2681 0.36 -1.0 2,806,759 + ygaY b2681 0.36 +0.0 2,806,760 + ygaY b2681 0.36 +0.2 2,806,870 + ygaY b2681 0.45 -0.0 2,806,870 + ygaY b2681 0.45 +0.2 2,806,876 - ygaY b2681 0.46 -1.5 2,806,876 - ygaY b2681 0.46 +0.1 2,806,925 - ygaY b2681 0.50 -0.8 2,807,086 + ygaY b2681 0.63 -0.5 2,807,111 - ygaY b2681 0.66 -0.2 2,807,111 - ygaY b2681 0.66 +1.4
Or see this region's nucleotide sequence