Experiment: Chlorite 0.4 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ybjX and b0878 are separated by 114 nucleotides b0878 and macB overlap by 4 nucleotides
b0877: ybjX - hypothetical protein (NCBI), at 917,351 to 918,343
ybjX
b0878: b0878 - putative membrane protein (VIMSS), at 918,458 to 919,573
b0878
b0879: macB - fused macrolide transporter subunits of ABC superfamily: ATP-binding component/membrane component (NCBI), at 919,570 to 921,516
macB
Position (kb)
918
919
920 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 917.467 kb on + strand, within ybjX at 917.467 kb on + strand, within ybjX at 917.528 kb on + strand, within ybjX at 917.528 kb on + strand, within ybjX at 917.643 kb on - strand, within ybjX at 917.658 kb on - strand, within ybjX at 917.658 kb on - strand, within ybjX at 917.775 kb on + strand, within ybjX at 917.828 kb on + strand, within ybjX at 917.838 kb on + strand, within ybjX at 917.878 kb on + strand, within ybjX at 917.878 kb on + strand, within ybjX at 917.891 kb on - strand, within ybjX at 917.948 kb on - strand, within ybjX at 918.050 kb on - strand, within ybjX at 918.059 kb on + strand, within ybjX at 918.271 kb on + strand at 918.484 kb on + strand at 918.620 kb on + strand, within b0878 at 918.789 kb on - strand, within b0878 at 918.849 kb on - strand at 918.849 kb on - strand, within b0878 at 918.985 kb on + strand, within b0878 at 919.227 kb on - strand, within b0878 at 919.262 kb on + strand, within b0878 at 919.262 kb on + strand, within b0878 at 919.298 kb on - strand, within b0878 at 919.298 kb on - strand, within b0878 at 919.343 kb on + strand, within b0878 at 919.557 kb on - strand at 919.636 kb on + strand at 919.765 kb on + strand, within macB at 919.979 kb on + strand, within macB at 919.979 kb on + strand, within macB at 919.994 kb on - strand, within macB at 919.994 kb on - strand, within macB at 920.012 kb on + strand at 920.023 kb on + strand, within macB at 920.068 kb on - strand, within macB at 920.199 kb on - strand, within macB at 920.267 kb on + strand, within macB at 920.415 kb on - strand, within macB at 920.443 kb on + strand, within macB at 920.458 kb on - strand, within macB at 920.459 kb on + strand, within macB at 920.459 kb on + strand, within macB
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 0.4 mM remove 917,467 + ybjX b0877 0.12 +0.3 917,467 + ybjX b0877 0.12 +0.6 917,528 + ybjX b0877 0.18 -0.4 917,528 + ybjX b0877 0.18 +0.5 917,643 - ybjX b0877 0.29 +0.4 917,658 - ybjX b0877 0.31 +0.6 917,658 - ybjX b0877 0.31 +1.6 917,775 + ybjX b0877 0.43 +0.7 917,828 + ybjX b0877 0.48 +0.7 917,838 + ybjX b0877 0.49 +0.1 917,878 + ybjX b0877 0.53 -3.3 917,878 + ybjX b0877 0.53 +0.4 917,891 - ybjX b0877 0.54 +0.9 917,948 - ybjX b0877 0.60 +0.6 918,050 - ybjX b0877 0.70 -0.6 918,059 + ybjX b0877 0.71 +0.4 918,271 + +0.2 918,484 + -0.0 918,620 + b0878 b0878 0.15 -0.5 918,789 - b0878 b0878 0.30 -0.5 918,849 - +1.1 918,849 - b0878 b0878 0.35 +1.1 918,985 + b0878 b0878 0.47 +0.8 919,227 - b0878 b0878 0.69 +0.9 919,262 + b0878 b0878 0.72 +2.4 919,262 + b0878 b0878 0.72 +0.9 919,298 - b0878 b0878 0.75 +0.3 919,298 - b0878 b0878 0.75 +1.0 919,343 + b0878 b0878 0.79 +0.1 919,557 - -0.5 919,636 + +1.4 919,765 + macB b0879 0.10 -0.8 919,979 + macB b0879 0.21 -0.9 919,979 + macB b0879 0.21 -0.7 919,994 - macB b0879 0.22 -0.2 919,994 - macB b0879 0.22 +1.7 920,012 + -1.4 920,023 + macB b0879 0.23 +0.6 920,068 - macB b0879 0.26 -0.1 920,199 - macB b0879 0.32 +0.0 920,267 + macB b0879 0.36 +0.6 920,415 - macB b0879 0.43 -0.4 920,443 + macB b0879 0.45 +0.1 920,458 - macB b0879 0.46 +0.1 920,459 + macB b0879 0.46 +1.1 920,459 + macB b0879 0.46 -0.7
Or see this region's nucleotide sequence