Strain Fitness in Pseudomonas sp. RS175 around PFR28_04480

Experiment: sn-glycero-3-phosphocholine (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sn-glycero-3-phosphocholine (C) 10 mM
5,103,070	+				-0.6
5,103,070	+				-0.9
5,103,070	+				-0.7
5,103,070	+				-0.2
5,103,070	+				-0.5
5,103,070	+				-2.1
5,103,070	+				-0.7
5,103,070	+				-2.1
5,103,071	-				-0.8
5,103,071	-				-0.0
5,103,071	-				+1.0
5,103,073	+				-3.0
5,103,073	+				-1.8
5,103,073	+				-1.4
5,103,073	+				-0.8
5,103,073	+				-2.3
5,103,073	+				+0.0
5,103,073	+				-1.5
5,103,073	+				-1.1
5,103,073	+				-0.1
5,103,074	-				+1.1
5,103,074	-				+0.2
5,103,074	-				+0.2
5,103,074	-				-1.6
5,103,074	-				+0.0
5,103,074	-				-0.6
5,103,074	-				+0.4
5,103,074	-				-1.3
5,103,160	+				-0.4
5,103,160	+				-1.1
5,103,160	+				-0.8
5,103,160	+				-1.2
5,103,161	-				+0.0
5,103,161	-				+0.3
5,103,161	-				+0.5
5,103,161	-				+1.2
5,103,161	-				+1.0
5,103,180	+				-2.8
5,103,180	+				-2.1
5,103,181	-				+0.4
5,103,181	-				-0.7
5,103,193	+				-2.0
5,103,193	+				-2.7
5,103,193	+				-3.1
5,103,193	+				-3.8
5,103,193	+				-1.8
5,103,193	+				-1.0
5,103,194	-				+1.5
5,103,194	-				+0.2
5,103,194	-				+1.2
5,103,194	-				+0.2
5,103,212	+				-1.9
5,103,212	+				-0.0
5,103,212	+				-1.1
5,103,212	+				-2.6
5,103,212	+				-1.7
5,103,213	-				+2.5
5,103,213	-				+0.6
5,103,213	-				+0.2
5,103,316	-		PFR28_04479	0.12	-0.5
5,103,540	+		PFR28_04479	0.44	-0.2
5,103,540	+		PFR28_04479	0.44	-0.5
5,103,540	+		PFR28_04479	0.44	+0.5
5,103,540	+		PFR28_04479	0.44	-0.2
5,103,540	+		PFR28_04479	0.44	+0.2
5,103,540	+		PFR28_04479	0.44	+0.5
5,103,540	+		PFR28_04479	0.44	-0.6
5,103,540	+		PFR28_04479	0.44	+0.2
5,103,540	+		PFR28_04479	0.44	+0.6
5,103,540	+		PFR28_04479	0.44	+1.2
5,103,540	+		PFR28_04479	0.44	+0.6
5,103,540	+		PFR28_04479	0.44	+0.5
5,103,540	+		PFR28_04479	0.44	+0.3
5,103,541	-		PFR28_04479	0.44	-0.4
5,103,541	-		PFR28_04479	0.44	-1.6
5,103,541	-		PFR28_04479	0.44	+1.2
5,103,541	-		PFR28_04479	0.44	-0.1
5,103,541	-		PFR28_04479	0.44	+0.4
5,103,541	-		PFR28_04479	0.44	+0.7
5,103,541	-		PFR28_04479	0.44	+1.3
5,103,541	-		PFR28_04479	0.44	+0.2
5,103,541	-		PFR28_04479	0.44	+0.2
5,103,756	+		PFR28_04479	0.76	+0.9
5,103,756	+		PFR28_04479	0.76	-0.2
5,103,756	+		PFR28_04479	0.76	+0.7
5,103,801	+		PFR28_04479	0.82	+0.4
5,103,801	+		PFR28_04479	0.82	-0.1
5,103,801	+		PFR28_04479	0.82	+1.1
5,103,801	+		PFR28_04479	0.82	+0.6
5,103,801	+		PFR28_04479	0.82	-0.1
5,103,802	-		PFR28_04479	0.82	-0.0
5,103,802	-		PFR28_04479	0.82	+0.8
5,103,802	-		PFR28_04479	0.82	-0.4
5,103,802	-		PFR28_04479	0.82	+0.3
5,103,864	+				+0.3
5,103,864	+				+0.6
5,103,865	-				-1.2
5,104,056	+				-1.1
5,104,056	+				-2.2
5,104,056	+				-1.6
5,104,057	-				-0.4
5,104,090	-				+0.0
5,104,090	-				+0.7
5,104,090	-				+0.1
5,104,090	-				+0.2
5,104,090	-				-1.2
5,104,206	+		PFR28_04480	0.16	+0.5
5,104,206	+		PFR28_04480	0.16	-1.0
5,104,206	+		PFR28_04480	0.16	-0.0
5,104,206	+		PFR28_04480	0.16	-1.6
5,104,206	+		PFR28_04480	0.16	-3.5
5,104,206	+		PFR28_04480	0.16	-2.0
5,104,206	+		PFR28_04480	0.16	+1.5
5,104,206	+		PFR28_04480	0.16	-1.5
5,104,206	+		PFR28_04480	0.16	-1.5
5,104,206	+		PFR28_04480	0.16	-3.8
5,104,206	+		PFR28_04480	0.16	-2.5
5,104,206	+		PFR28_04480	0.16	-2.1
5,104,207	-		PFR28_04480	0.16	+0.3
5,104,207	-		PFR28_04480	0.16	-0.7
5,104,207	-		PFR28_04480	0.16	+0.2
5,104,207	-		PFR28_04480	0.16	-0.3
5,104,207	-		PFR28_04480	0.16	+1.5
5,104,207	-		PFR28_04480	0.16	+0.5
5,104,207	-		PFR28_04480	0.16	-1.1
5,104,207	-		PFR28_04480	0.16	+0.0
5,104,278	-		PFR28_04480	0.21	-0.6
5,104,408	+		PFR28_04480	0.31	-1.8
5,104,431	+		PFR28_04480	0.33	-0.9
5,104,431	+		PFR28_04480	0.33	-1.2
5,104,431	+		PFR28_04480	0.33	-2.5
5,104,431	+		PFR28_04480	0.33	-2.8
5,104,432	-		PFR28_04480	0.33	+0.3
5,104,450	-		PFR28_04480	0.35	-0.3
5,104,450	-		PFR28_04480	0.35	+0.3
5,104,506	+		PFR28_04480	0.39	-2.3
5,104,506	+		PFR28_04480	0.39	-2.2
5,104,506	+		PFR28_04480	0.39	-4.1
5,104,507	-		PFR28_04480	0.39	-0.7
5,104,507	-		PFR28_04480	0.39	-0.7
5,104,507	-		PFR28_04480	0.39	+0.6
5,104,507	-		PFR28_04480	0.39	-0.5
5,104,507	-		PFR28_04480	0.39	-1.4
5,104,507	-		PFR28_04480	0.39	-0.1
5,104,507	-		PFR28_04480	0.39	+0.2
5,104,507	-		PFR28_04480	0.39	-0.8
5,104,507	-		PFR28_04480	0.39	-0.6
5,104,507	-		PFR28_04480	0.39	-1.5
5,104,507	-		PFR28_04480	0.39	-1.0
5,104,974	+		PFR28_04480	0.75	-2.3
5,104,974	+		PFR28_04480	0.75	-1.1
5,104,974	+		PFR28_04480	0.75	-0.9
5,104,975	-		PFR28_04480	0.75	-0.7
5,104,975	-		PFR28_04480	0.75	+0.0
5,105,020	+		PFR28_04480	0.79	+1.1
5,105,020	+		PFR28_04480	0.79	+0.3
5,105,020	+		PFR28_04480	0.79	-2.5
5,105,020	+		PFR28_04480	0.79	-2.3
5,105,020	+		PFR28_04480	0.79	-1.1
5,105,021	-		PFR28_04480	0.79	+0.5
5,105,021	-		PFR28_04480	0.79	-0.8
5,105,021	-		PFR28_04480	0.79	-0.1
5,105,021	-		PFR28_04480	0.79	-0.5
5,105,021	-		PFR28_04480	0.79	-1.3
5,105,021	-		PFR28_04480	0.79	-1.3
5,105,100	+		PFR28_04480	0.85	-1.6
5,105,100	+		PFR28_04480	0.85	-0.3
5,105,100	+		PFR28_04480	0.85	-1.6
5,105,100	+		PFR28_04480	0.85	-0.3
5,105,101	-		PFR28_04480	0.85	-1.5
5,105,101	-		PFR28_04480	0.85	-0.3
5,105,101	-		PFR28_04480	0.85	-1.1
5,105,231	+				-0.1
5,105,231	+				-1.2
5,105,231	+				-1.0
5,105,231	+				-2.8
5,105,232	-				-0.6
5,105,232	-				-0.3
5,105,232	-				-1.3
5,105,232	-				-0.1
5,105,232	-				-0.8
5,105,335	+				+0.4
5,105,336	-				+0.7
5,105,626	+		PFR28_04481	0.16	-0.5
5,105,627	-		PFR28_04481	0.16	+0.2
5,105,652	+		PFR28_04481	0.18	-0.3
5,105,652	+		PFR28_04481	0.18	-1.0
5,105,884	+		PFR28_04481	0.35	-0.7
5,105,884	+		PFR28_04481	0.35	-1.4
5,105,884	+		PFR28_04481	0.35	+0.7
5,105,885	-		PFR28_04481	0.35	-0.5
5,105,885	-		PFR28_04481	0.35	-1.1
5,105,893	+		PFR28_04481	0.36	-0.2
5,105,893	+		PFR28_04481	0.36	-0.7
5,105,894	-		PFR28_04481	0.36	-1.8
5,105,894	-		PFR28_04481	0.36	+0.5
5,105,905	+		PFR28_04481	0.36	-0.3
5,105,905	+		PFR28_04481	0.36	+0.1
5,105,905	+		PFR28_04481	0.36	-0.8
5,105,906	-		PFR28_04481	0.37	-0.7
5,105,906	-		PFR28_04481	0.37	+0.0
5,105,906	-		PFR28_04481	0.37	+1.5
5,105,906	-		PFR28_04481	0.37	-0.1
5,105,917	+		PFR28_04481	0.37	-0.7
5,105,917	+		PFR28_04481	0.37	-0.1
5,105,918	-		PFR28_04481	0.37	+0.2
5,105,918	-		PFR28_04481	0.37	+0.6
5,105,918	-		PFR28_04481	0.37	+0.2
5,105,918	-		PFR28_04481	0.37	+0.2
5,105,996	-		PFR28_04481	0.43	-0.6
5,105,996	-		PFR28_04481	0.43	-2.8
5,106,215	-		PFR28_04481	0.60	+0.4
5,106,215	-		PFR28_04481	0.60	+0.2