Strain Fitness in Pseudomonas sp. RS175 around PFR28_03686

Experiment: sn-glycero-3-phosphocholine (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sn-glycero-3-phosphocholine (C) 10 mM
4,250,356	+		PFR28_03685	0.79	-0.7
4,250,357	-		PFR28_03685	0.80	-0.1
4,250,376	-		PFR28_03685	0.80	-2.5
4,250,376	-		PFR28_03685	0.80	+0.1
4,250,456	+		PFR28_03685	0.83	-0.7
4,250,457	-		PFR28_03685	0.83	-1.2
4,250,560	+		PFR28_03685	0.87	-0.8
4,250,561	-		PFR28_03685	0.87	+1.4
4,250,561	-		PFR28_03685	0.87	-0.6
4,250,624	+		PFR28_03685	0.89	-0.4
4,250,624	+		PFR28_03685	0.89	+1.3
4,250,624	+		PFR28_03685	0.89	+0.8
4,250,624	+		PFR28_03685	0.89	+0.6
4,250,624	+		PFR28_03685	0.89	+0.2
4,250,624	+		PFR28_03685	0.89	+0.6
4,250,624	+		PFR28_03685	0.89	+1.0
4,250,624	+		PFR28_03685	0.89	+1.0
4,250,624	+		PFR28_03685	0.89	+0.6
4,250,624	+		PFR28_03685	0.89	-0.8
4,250,624	+		PFR28_03685	0.89	-0.2
4,250,624	+		PFR28_03685	0.89	+0.1
4,250,624	+		PFR28_03685	0.89	-0.7
4,250,624	+		PFR28_03685	0.89	+0.8
4,250,624	+		PFR28_03685	0.89	-2.0
4,250,625	-		PFR28_03685	0.89	-0.7
4,250,625	-		PFR28_03685	0.89	+0.6
4,250,625	-		PFR28_03685	0.89	-1.2
4,250,625	-		PFR28_03685	0.89	+0.3
4,250,625	-		PFR28_03685	0.89	+2.0
4,250,625	-		PFR28_03685	0.89	+0.5
4,250,625	-		PFR28_03685	0.89	-1.6
4,250,625	-		PFR28_03685	0.89	-0.6
4,250,625	-		PFR28_03685	0.89	+0.7
4,250,625	-		PFR28_03685	0.89	-1.1
4,250,625	-		PFR28_03685	0.89	+1.3
4,250,625	-		PFR28_03685	0.89	-0.6
4,250,625	-		PFR28_03685	0.89	+1.0
4,250,625	-		PFR28_03685	0.89	+0.4
4,250,625	-		PFR28_03685	0.89	-1.0
4,250,625	-		PFR28_03685	0.89	-0.1
4,250,625	-		PFR28_03685	0.89	-0.4
4,250,625	-		PFR28_03685	0.89	-0.7
4,250,678	+				+0.3
4,250,678	+				-1.2
4,250,679	-				+0.5
4,250,681	+				-0.1
4,250,681	+				+0.2
4,250,682	-				-0.3
4,250,682	-				-1.2
4,250,748	+				-1.4
4,250,840	+				+0.3
4,250,840	+				+1.1
4,250,840	+				-0.3
4,250,840	+				+0.6
4,250,840	+				-0.2
4,250,841	-				+0.6
4,250,841	-				+0.5
4,250,865	-				+1.7
4,250,905	-				+1.4
4,250,905	-				-0.4
4,250,905	-				+0.4
4,250,945	+				+0.3
4,250,946	-				+0.0
4,250,953	+				+0.6
4,250,979	+				+3.2
4,251,146	+				-0.9
4,251,146	+				-0.3
4,251,146	+				+0.3
4,251,146	+				+0.6
4,251,146	+				-0.6
4,251,147	-				-0.1
4,251,147	-				+0.5
4,251,147	-				+0.1
4,251,147	-				+0.4
4,251,147	-				-0.2
4,251,147	-				+0.3
4,251,147	-				-0.9
4,251,358	-				+0.7
4,251,378	+		PFR28_03686	0.10	-0.6
4,251,378	+		PFR28_03686	0.10	-0.3
4,251,379	-		PFR28_03686	0.10	+0.2
4,251,395	+		PFR28_03686	0.11	+0.9
4,251,395	+		PFR28_03686	0.11	+1.2
4,251,395	+		PFR28_03686	0.11	+1.2
4,251,395	+		PFR28_03686	0.11	-0.6
4,251,395	+		PFR28_03686	0.11	-0.2
4,251,395	+		PFR28_03686	0.11	-2.1
4,251,395	+		PFR28_03686	0.11	+1.1
4,251,396	-		PFR28_03686	0.11	+1.4
4,251,396	-		PFR28_03686	0.11	+0.5
4,251,396	-		PFR28_03686	0.11	+0.7
4,251,396	-		PFR28_03686	0.11	+0.5
4,251,396	-		PFR28_03686	0.11	+1.4
4,251,399	+		PFR28_03686	0.11	-0.9
4,251,399	+		PFR28_03686	0.11	+1.4
4,251,452	+		PFR28_03686	0.13	+3.0
4,251,641	+		PFR28_03686	0.22	+0.7
4,252,109	+		PFR28_03686	0.42	+0.2
4,252,110	-		PFR28_03686	0.42	+1.5
4,252,122	+		PFR28_03686	0.42	+1.2
4,252,122	+		PFR28_03686	0.42	+0.8
4,252,123	-		PFR28_03686	0.42	+1.2
4,252,123	-		PFR28_03686	0.42	-0.2
4,252,123	-		PFR28_03686	0.42	+1.2
4,252,126	+		PFR28_03686	0.43	+0.6
4,252,126	+		PFR28_03686	0.43	+0.9
4,252,126	+		PFR28_03686	0.43	+1.6
4,252,127	-		PFR28_03686	0.43	+0.8
4,252,127	-		PFR28_03686	0.43	-1.3
4,252,127	-		PFR28_03686	0.43	+1.3
4,252,166	+		PFR28_03686	0.44	+2.2
4,252,166	+		PFR28_03686	0.44	-0.6
4,252,166	+		PFR28_03686	0.44	-0.5
4,252,166	+		PFR28_03686	0.44	-0.0
4,252,167	-		PFR28_03686	0.44	+1.4
4,252,167	-		PFR28_03686	0.44	+0.3
4,252,167	-		PFR28_03686	0.44	+0.0
4,252,167	-		PFR28_03686	0.44	+0.0
4,252,167	-		PFR28_03686	0.44	-0.1
4,252,199	+		PFR28_03686	0.46	+0.8
4,252,200	-		PFR28_03686	0.46	+0.8
4,252,200	-		PFR28_03686	0.46	+1.4
4,252,355	+		PFR28_03686	0.53	-0.2
4,252,355	+		PFR28_03686	0.53	+1.1
4,252,355	+		PFR28_03686	0.53	+0.2
4,252,355	+		PFR28_03686	0.53	-0.0
4,252,355	+		PFR28_03686	0.53	-0.1
4,252,355	+		PFR28_03686	0.53	+0.0
4,252,356	-		PFR28_03686	0.53	+1.7
4,252,356	-		PFR28_03686	0.53	+0.1
4,252,356	-		PFR28_03686	0.53	-0.0
4,252,356	-		PFR28_03686	0.53	+1.0
4,252,356	-		PFR28_03686	0.53	+0.6
4,252,359	+		PFR28_03686	0.53	-0.8
4,252,359	+		PFR28_03686	0.53	+0.0
4,252,359	+		PFR28_03686	0.53	-1.7
4,252,359	+		PFR28_03686	0.53	+0.9
4,252,359	+		PFR28_03686	0.53	+1.9
4,252,359	+		PFR28_03686	0.53	+1.2
4,252,359	+		PFR28_03686	0.53	+0.8
4,252,359	+		PFR28_03686	0.53	-0.1
4,252,360	-		PFR28_03686	0.53	-0.6
4,252,360	-		PFR28_03686	0.53	+2.2
4,252,360	-		PFR28_03686	0.53	+0.5
4,252,445	+		PFR28_03686	0.56	+0.8
4,252,446	-		PFR28_03686	0.56	+0.5
4,252,446	-		PFR28_03686	0.56	+0.4
4,252,446	-		PFR28_03686	0.56	-0.1
4,252,446	-		PFR28_03686	0.56	+0.3
4,252,446	-		PFR28_03686	0.56	+0.6
4,252,446	-		PFR28_03686	0.56	-0.6
4,252,544	+		PFR28_03686	0.61	-0.5
4,252,544	+		PFR28_03686	0.61	+2.5
4,252,544	+		PFR28_03686	0.61	+0.3
4,252,544	+		PFR28_03686	0.61	-0.3
4,252,545	-		PFR28_03686	0.61	-1.0
4,252,545	-		PFR28_03686	0.61	-0.9
4,252,545	-		PFR28_03686	0.61	+0.6
4,252,545	-		PFR28_03686	0.61	+0.4
4,252,638	-		PFR28_03686	0.65	+2.7
4,252,826	+		PFR28_03686	0.73	+0.5
4,252,826	+		PFR28_03686	0.73	-1.6
4,252,826	+		PFR28_03686	0.73	+1.0
4,252,826	+		PFR28_03686	0.73	+1.3
4,252,827	-		PFR28_03686	0.73	+1.1
4,252,827	-		PFR28_03686	0.73	+1.7
4,252,883	+		PFR28_03686	0.75	+1.3
4,252,884	-		PFR28_03686	0.75	-0.7
4,252,916	+		PFR28_03686	0.77	+0.9
4,252,916	+		PFR28_03686	0.77	+2.4
4,252,916	+		PFR28_03686	0.77	+0.9
4,252,916	+		PFR28_03686	0.77	+0.4
4,252,917	-		PFR28_03686	0.77	+1.0
4,252,917	-		PFR28_03686	0.77	+1.2
4,252,917	-		PFR28_03686	0.77	+1.4
4,252,917	-		PFR28_03686	0.77	+0.6
4,253,066	+		PFR28_03686	0.83	-2.5
4,253,066	+		PFR28_03686	0.83	+1.0
4,253,066	+		PFR28_03686	0.83	+1.4
4,253,066	+		PFR28_03686	0.83	+0.8
4,253,066	+		PFR28_03686	0.83	+1.7
4,253,066	+		PFR28_03686	0.83	+1.8
4,253,066	+		PFR28_03686	0.83	+0.4
4,253,066	+		PFR28_03686	0.83	+1.8
4,253,066	+		PFR28_03686	0.83	+0.0
4,253,066	+		PFR28_03686	0.83	+0.4
4,253,066	+		PFR28_03686	0.83	-1.7
4,253,066	+		PFR28_03686	0.83	+1.3
4,253,066	+		PFR28_03686	0.83	-0.8
4,253,066	+		PFR28_03686	0.83	+0.6
4,253,066	+		PFR28_03686	0.83	+1.2
4,253,066	+		PFR28_03686	0.83	+0.4
4,253,066	+		PFR28_03686	0.83	+0.8
4,253,066	+		PFR28_03686	0.83	+0.4
4,253,066	+		PFR28_03686	0.83	+2.3
4,253,066	+		PFR28_03686	0.83	+0.7
4,253,067	-		PFR28_03686	0.83	-0.4
4,253,067	-		PFR28_03686	0.83	+1.1
4,253,067	-		PFR28_03686	0.83	+1.0
4,253,067	-		PFR28_03686	0.83	+0.5
4,253,067	-		PFR28_03686	0.83	+0.6
4,253,067	-		PFR28_03686	0.83	+0.8
4,253,067	-		PFR28_03686	0.83	+1.4
4,253,067	-		PFR28_03686	0.83	-2.1
4,253,067	-		PFR28_03686	0.83	+1.6
4,253,067	-		PFR28_03686	0.83	+0.6
4,253,067	-		PFR28_03686	0.83	+3.8
4,253,067	-		PFR28_03686	0.83	+0.8
4,253,067	-		PFR28_03686	0.83	+0.6
4,253,067	-		PFR28_03686	0.83	+1.4
4,253,067	-		PFR28_03686	0.83	-0.1
4,253,067	-		PFR28_03686	0.83	-0.7
4,253,067	-		PFR28_03686	0.83	+2.4
4,253,067	-		PFR28_03686	0.83	+2.0
4,253,067	-		PFR28_03686	0.83	+0.6
4,253,067	-		PFR28_03686	0.83	+1.2
4,253,067	-		PFR28_03686	0.83	+0.4
4,253,070	+		PFR28_03686	0.84	+0.2
4,253,070	+		PFR28_03686	0.84	-0.1
4,253,070	+		PFR28_03686	0.84	-0.6
4,253,070	+		PFR28_03686	0.84	+0.3
4,253,070	+		PFR28_03686	0.84	+0.1
4,253,071	-		PFR28_03686	0.84	+1.7
4,253,071	-		PFR28_03686	0.84	+0.2
4,253,071	-		PFR28_03686	0.84	+0.4
4,253,071	-		PFR28_03686	0.84	+1.8
4,253,156	+		PFR28_03686	0.87	+1.0
4,253,156	+		PFR28_03686	0.87	+1.7
4,253,156	+		PFR28_03686	0.87	+0.6
4,253,156	+		PFR28_03686	0.87	-0.0
4,253,156	+		PFR28_03686	0.87	+1.2
4,253,157	-		PFR28_03686	0.87	+0.6
4,253,253	+				+0.8
4,253,253	+				+0.3
4,253,254	-				+0.8
4,253,262	-				+0.4
4,253,262	-				+0.9
4,253,337	+				-0.2
4,253,337	+				+1.0
4,253,337	+				+0.2
4,253,337	+				+0.6
4,253,337	+				+2.2
4,253,338	-				+1.4
4,253,338	-				-0.6
4,253,338	-				+0.1
4,253,338	-				+0.1
4,253,338	-				-1.0
4,253,338	-				+0.4
4,253,338	-				+0.4
4,253,338	-				+0.3
4,253,338	-				+1.6
4,253,339	+				-0.5
4,253,339	+				+0.4
4,253,339	+				+0.7
4,253,339	+				-1.1
4,253,339	+				+0.2
4,253,339	+				+0.9
4,253,340	-				+1.6
4,253,340	-				+0.7
4,253,340	-				+0.7
4,253,340	-				+1.4
4,253,340	-				+1.5
4,253,340	-				+1.6
4,253,340	-				+0.9
4,253,340	-				-1.1
4,253,340	-				-0.1
4,253,340	-				+1.1
4,253,434	-				+0.1
4,253,498	+				-0.1
4,253,499	-				-0.1
4,253,609	+		PFR28_03687	0.27	+0.7
4,253,610	-		PFR28_03687	0.27	-0.2
4,253,610	-		PFR28_03687	0.27	+1.0
4,253,617	+		PFR28_03687	0.28	+0.5
4,253,658	+		PFR28_03687	0.35	+2.3
4,253,659	-		PFR28_03687	0.35	+2.0
4,253,659	-		PFR28_03687	0.35	+0.3
4,253,662	+		PFR28_03687	0.35	+0.4
4,253,662	+		PFR28_03687	0.35	+0.7
4,253,662	+		PFR28_03687	0.35	+1.0
4,253,662	+		PFR28_03687	0.35	+1.8
4,253,662	+		PFR28_03687	0.35	+1.4
4,253,662	+		PFR28_03687	0.35	+2.3
4,253,662	+		PFR28_03687	0.35	+1.5
4,253,662	+		PFR28_03687	0.35	+1.7
4,253,662	+		PFR28_03687	0.35	-0.4
4,253,662	+		PFR28_03687	0.35	-0.2
4,253,662	+		PFR28_03687	0.35	-1.4
4,253,663	-		PFR28_03687	0.36	+2.4
4,253,663	-		PFR28_03687	0.36	+0.2
4,253,663	-		PFR28_03687	0.36	+0.4
4,253,663	-		PFR28_03687	0.36	+0.8
4,253,663	-		PFR28_03687	0.36	-1.3
4,253,663	-		PFR28_03687	0.36	+0.3
4,253,663	-		PFR28_03687	0.36	-0.3
4,253,663	-		PFR28_03687	0.36	+1.0
4,253,663	-		PFR28_03687	0.36	+0.2
4,253,702	+		PFR28_03687	0.42	-0.9
4,253,730	-		PFR28_03687	0.46	+4.0
4,253,750	+		PFR28_03687	0.50	+1.1
4,253,750	+		PFR28_03687	0.50	+1.9
4,253,750	+		PFR28_03687	0.50	-0.1
4,253,890	+		PFR28_03687	0.72	+0.9
4,253,890	+		PFR28_03687	0.72	-0.3
4,253,890	+		PFR28_03687	0.72	+0.4
4,253,891	-		PFR28_03687	0.72	+1.5
4,253,891	-		PFR28_03687	0.72	+2.3
4,253,891	-		PFR28_03687	0.72	-0.4
4,253,892	+		PFR28_03687	0.72	+0.6
4,253,892	+		PFR28_03687	0.72	+1.6
4,253,892	+		PFR28_03687	0.72	+0.6
4,253,892	+		PFR28_03687	0.72	+0.8
4,253,892	+		PFR28_03687	0.72	+1.0
4,253,893	-		PFR28_03687	0.72	+0.7
4,253,893	-		PFR28_03687	0.72	+1.0
4,253,893	-		PFR28_03687	0.72	+0.6
4,253,893	-		PFR28_03687	0.72	-0.1
4,253,893	-		PFR28_03687	0.72	+0.6
4,253,893	-		PFR28_03687	0.72	+1.6
4,253,893	-		PFR28_03687	0.72	+0.6
4,253,913	-		PFR28_03687	0.76	+1.0
4,254,081	+				+1.0
4,254,081	+				+0.6
4,254,141	+		PFR28_03688	0.14	+0.1
4,254,141	+		PFR28_03688	0.14	+3.9
4,254,142	-		PFR28_03688	0.14	-0.2
4,254,149	+		PFR28_03688	0.15	+0.4
4,254,150	-		PFR28_03688	0.15	-0.8
4,254,150	-		PFR28_03688	0.15	+1.0
4,254,165	+		PFR28_03688	0.17	+1.3
4,254,166	-		PFR28_03688	0.17	+1.4
4,254,210	+		PFR28_03688	0.24	+1.6
4,254,210	+		PFR28_03688	0.24	+0.1
4,254,210	+		PFR28_03688	0.24	-0.1
4,254,229	+		PFR28_03688	0.27	+0.3
4,254,229	+		PFR28_03688	0.27	+1.1
4,254,230	-		PFR28_03688	0.27	+2.7
4,254,230	-		PFR28_03688	0.27	+0.5
4,254,255	+		PFR28_03688	0.31	+0.2
4,254,255	+		PFR28_03688	0.31	+0.4
4,254,255	+		PFR28_03688	0.31	+0.9
4,254,256	-		PFR28_03688	0.31	+0.8
4,254,265	+		PFR28_03688	0.32	+1.2
4,254,265	+		PFR28_03688	0.32	+0.9
4,254,265	+		PFR28_03688	0.32	+1.9
4,254,265	+		PFR28_03688	0.32	+0.8
4,254,265	+		PFR28_03688	0.32	+0.1
4,254,265	+		PFR28_03688	0.32	+1.4
4,254,266	-		PFR28_03688	0.33	+1.2
4,254,275	-		PFR28_03688	0.34	+1.2
4,254,289	+		PFR28_03688	0.36	+1.9
4,254,289	+		PFR28_03688	0.36	+0.0
4,254,289	+		PFR28_03688	0.36	+1.0
4,254,289	+		PFR28_03688	0.36	-0.3
4,254,290	-		PFR28_03688	0.36	+0.2
4,254,293	+		PFR28_03688	0.37	+2.0
4,254,357	+		PFR28_03688	0.46	+1.3
4,254,357	+		PFR28_03688	0.46	-0.3
4,254,357	+		PFR28_03688	0.46	+1.3
4,254,357	+		PFR28_03688	0.46	+0.4
4,254,357	+		PFR28_03688	0.46	+1.0
4,254,358	-		PFR28_03688	0.47	-0.6
4,254,358	-		PFR28_03688	0.47	+1.4
4,254,358	-		PFR28_03688	0.47	-0.1
4,254,358	-		PFR28_03688	0.47	+0.4
4,254,358	-		PFR28_03688	0.47	+0.3
4,254,358	-		PFR28_03688	0.47	-0.5
4,254,358	-		PFR28_03688	0.47	+0.1
4,254,358	-		PFR28_03688	0.47	+0.4