Strain Fitness in Pseudomonas sp. RS175 around PFR28_02905

Experiment: sn-glycero-3-phosphocholine (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sn-glycero-3-phosphocholine (C) 10 mM
3,416,751	+		PFR28_02904	0.13	+0.3
3,416,752	-		PFR28_02904	0.13	+1.9
3,416,784	+		PFR28_02904	0.17	-0.7
3,416,785	-		PFR28_02904	0.17	+1.0
3,416,785	-		PFR28_02904	0.17	+1.1
3,416,785	-		PFR28_02904	0.17	-0.6
3,416,785	-		PFR28_02904	0.17	+0.7
3,416,851	-		PFR28_02904	0.24	-0.7
3,416,851	-		PFR28_02904	0.24	-2.3
3,416,851	-		PFR28_02904	0.24	+0.6
3,416,851	-		PFR28_02904	0.24	+1.3
3,416,851	-		PFR28_02904	0.24	+0.1
3,416,851	-		PFR28_02904	0.24	+0.2
3,416,854	+		PFR28_02904	0.25	-0.1
3,416,854	+		PFR28_02904	0.25	+0.7
3,416,854	+		PFR28_02904	0.25	+0.7
3,416,854	+		PFR28_02904	0.25	+0.7
3,416,855	-		PFR28_02904	0.25	+2.0
3,416,855	-		PFR28_02904	0.25	-2.3
3,416,855	-		PFR28_02904	0.25	+0.7
3,416,859	+		PFR28_02904	0.25	-0.3
3,416,859	+		PFR28_02904	0.25	+0.9
3,416,859	+		PFR28_02904	0.25	-0.3
3,416,860	-		PFR28_02904	0.25	-0.5
3,416,903	+		PFR28_02904	0.30	+0.2
3,416,903	+		PFR28_02904	0.30	+0.4
3,416,903	+		PFR28_02904	0.30	-0.7
3,416,903	+		PFR28_02904	0.30	-0.1
3,416,903	+		PFR28_02904	0.30	+0.3
3,416,903	+		PFR28_02904	0.30	+1.3
3,416,903	+		PFR28_02904	0.30	-2.2
3,416,903	+		PFR28_02904	0.30	+0.5
3,416,903	+		PFR28_02904	0.30	-0.4
3,416,903	+		PFR28_02904	0.30	+0.2
3,416,903	+		PFR28_02904	0.30	+1.4
3,416,903	+		PFR28_02904	0.30	-0.2
3,416,903	+		PFR28_02904	0.30	+0.4
3,416,903	+		PFR28_02904	0.30	+1.1
3,416,903	+		PFR28_02904	0.30	-0.0
3,416,903	+		PFR28_02904	0.30	-0.1
3,416,903	+		PFR28_02904	0.30	+0.2
3,416,903	+		PFR28_02904	0.30	+0.3
3,416,903	+		PFR28_02904	0.30	-0.6
3,416,903	+		PFR28_02904	0.30	-0.3
3,416,903	+		PFR28_02904	0.30	+0.7
3,416,903	+		PFR28_02904	0.30	+0.3
3,416,904	-		PFR28_02904	0.30	+0.5
3,416,904	-		PFR28_02904	0.30	+0.6
3,416,904	-		PFR28_02904	0.30	-0.3
3,416,904	-		PFR28_02904	0.30	+0.4
3,416,904	-		PFR28_02904	0.30	+0.4
3,416,904	-		PFR28_02904	0.30	+0.2
3,416,904	-		PFR28_02904	0.30	-0.7
3,416,904	-		PFR28_02904	0.30	+1.0
3,416,904	-		PFR28_02904	0.30	+1.0
3,416,904	-		PFR28_02904	0.30	+1.1
3,416,904	-		PFR28_02904	0.30	+0.6
3,416,904	-		PFR28_02904	0.30	+0.2
3,416,904	-		PFR28_02904	0.30	-1.3
3,416,904	-		PFR28_02904	0.30	+0.2
3,416,904	-		PFR28_02904	0.30	+0.6
3,416,904	-		PFR28_02904	0.30	+0.1
3,416,905	+		PFR28_02904	0.30	+0.5
3,416,905	+		PFR28_02904	0.30	+0.1
3,416,905	+		PFR28_02904	0.30	-0.3
3,416,905	+		PFR28_02904	0.30	-0.3
3,416,905	+		PFR28_02904	0.30	+0.3
3,416,905	+		PFR28_02904	0.30	+0.7
3,416,906	-		PFR28_02904	0.30	+1.1
3,416,906	-		PFR28_02904	0.30	-1.1
3,416,906	-		PFR28_02904	0.30	-0.7
3,416,906	-		PFR28_02904	0.30	-1.1
3,416,906	-		PFR28_02904	0.30	-0.1
3,416,906	-		PFR28_02904	0.30	+2.5
3,416,906	-		PFR28_02904	0.30	+1.7
3,416,906	-		PFR28_02904	0.30	-0.3
3,416,974	+		PFR28_02904	0.38	+1.1
3,416,974	+		PFR28_02904	0.38	+0.9
3,416,975	-		PFR28_02904	0.38	+0.1
3,416,975	-		PFR28_02904	0.38	+1.4
3,416,978	+		PFR28_02904	0.39	-1.0
3,416,978	+		PFR28_02904	0.39	+0.2
3,416,978	+		PFR28_02904	0.39	-1.0
3,416,978	+		PFR28_02904	0.39	-0.1
3,416,978	+		PFR28_02904	0.39	-0.1
3,416,978	+		PFR28_02904	0.39	-0.4
3,416,978	+		PFR28_02904	0.39	+0.0
3,416,979	-		PFR28_02904	0.39	+1.0
3,416,979	-		PFR28_02904	0.39	+0.4
3,416,979	-		PFR28_02904	0.39	+0.8
3,416,979	-		PFR28_02904	0.39	+0.8
3,416,979	-		PFR28_02904	0.39	-1.0
3,416,979	-		PFR28_02904	0.39	+0.0
3,416,979	-		PFR28_02904	0.39	+0.9
3,416,979	-		PFR28_02904	0.39	-0.7
3,416,979	-		PFR28_02904	0.39	-0.6
3,417,081	+		PFR28_02904	0.50	+0.5
3,417,081	+		PFR28_02904	0.50	-1.9
3,417,082	-		PFR28_02904	0.50	+1.3
3,417,092	+		PFR28_02904	0.51	-0.3
3,417,125	+		PFR28_02904	0.55	-2.1
3,417,125	+		PFR28_02904	0.55	-0.4
3,417,125	+		PFR28_02904	0.55	-0.6
3,417,125	+		PFR28_02904	0.55	-0.8
3,417,125	+		PFR28_02904	0.55	+1.9
3,417,125	+		PFR28_02904	0.55	+1.0
3,417,125	+		PFR28_02904	0.55	+0.3
3,417,125	+		PFR28_02904	0.55	-0.0
3,417,125	+		PFR28_02904	0.55	-1.0
3,417,126	-		PFR28_02904	0.55	+0.4
3,417,126	-		PFR28_02904	0.55	+0.6
3,417,126	-		PFR28_02904	0.55	+0.1
3,417,126	-		PFR28_02904	0.55	+1.0
3,417,126	-		PFR28_02904	0.55	+0.2
3,417,126	-		PFR28_02904	0.55	+1.4
3,417,126	-		PFR28_02904	0.55	-0.7
3,417,126	-		PFR28_02904	0.55	-0.4
3,417,126	-		PFR28_02904	0.55	-0.6
3,417,126	-		PFR28_02904	0.55	-0.6
3,417,126	-		PFR28_02904	0.55	+0.9
3,417,126	-		PFR28_02904	0.55	-0.8
3,417,126	-		PFR28_02904	0.55	+2.2
3,417,126	-		PFR28_02904	0.55	-1.4
3,417,127	+		PFR28_02904	0.55	+0.7
3,417,127	+		PFR28_02904	0.55	-0.1
3,417,127	+		PFR28_02904	0.55	-1.1
3,417,127	+		PFR28_02904	0.55	-0.0
3,417,127	+		PFR28_02904	0.55	+0.4
3,417,127	+		PFR28_02904	0.55	-0.3
3,417,127	+		PFR28_02904	0.55	-0.6
3,417,128	-		PFR28_02904	0.55	-0.1
3,417,128	-		PFR28_02904	0.55	-0.1
3,417,128	-		PFR28_02904	0.55	-0.5
3,417,128	-		PFR28_02904	0.55	+0.1
3,417,128	-		PFR28_02904	0.55	+0.3
3,417,128	-		PFR28_02904	0.55	+1.1
3,417,128	-		PFR28_02904	0.55	-0.3
3,417,129	+		PFR28_02904	0.56	+0.6
3,417,129	+		PFR28_02904	0.56	-0.6
3,417,129	+		PFR28_02904	0.56	+0.6
3,417,129	+		PFR28_02904	0.56	-0.8
3,417,129	+		PFR28_02904	0.56	+0.0
3,417,130	-		PFR28_02904	0.56	+0.2
3,417,130	-		PFR28_02904	0.56	+0.1
3,417,130	-		PFR28_02904	0.56	-0.6
3,417,130	-		PFR28_02904	0.56	+0.2
3,417,130	-		PFR28_02904	0.56	+0.5
3,417,130	-		PFR28_02904	0.56	+0.7
3,417,130	-		PFR28_02904	0.56	+0.1
3,417,130	-		PFR28_02904	0.56	+0.2
3,417,130	-		PFR28_02904	0.56	+0.4
3,417,130	-		PFR28_02904	0.56	+0.1
3,417,130	-		PFR28_02904	0.56	+0.2
3,417,130	-		PFR28_02904	0.56	+1.2
3,417,292	+		PFR28_02904	0.74	-0.7
3,417,292	+		PFR28_02904	0.74	+0.6
3,417,293	-		PFR28_02904	0.74	+0.4
3,417,293	-		PFR28_02904	0.74	+0.3
3,417,305	+		PFR28_02904	0.75	+0.3
3,417,305	+		PFR28_02904	0.75	+1.4
3,417,305	+		PFR28_02904	0.75	-2.3
3,417,305	+		PFR28_02904	0.75	-0.2
3,417,306	-		PFR28_02904	0.75	+1.0
3,417,306	-		PFR28_02904	0.75	-1.2
3,417,402	+		PFR28_02904	0.86	+2.0
3,417,403	-		PFR28_02904	0.86	+0.0
3,417,403	-		PFR28_02904	0.86	+0.7
3,417,403	-		PFR28_02904	0.86	-0.3
3,417,416	+		PFR28_02904	0.88	+1.1
3,417,417	-		PFR28_02904	0.88	+0.0
3,417,417	-		PFR28_02904	0.88	+1.1
3,417,563	-				-0.4
3,417,573	+				-0.4
3,417,574	-				-1.0
3,417,653	+				-0.4
3,417,653	+				+0.5
3,417,653	+				+0.2
3,417,653	+				+1.0
3,417,654	-				-0.7
3,417,654	-				+0.4
3,417,654	-				-0.5
3,417,654	-				+0.9
3,417,680	+				+0.5
3,417,680	+				+1.4
3,417,680	+				+0.8
3,417,681	-				-0.4
3,417,681	-				+2.2
3,417,707	+				-0.1
3,417,786	+		PFR28_02905	0.34	-0.2
3,417,786	+		PFR28_02905	0.34	+0.3
3,417,787	-		PFR28_02905	0.34	+1.0
3,417,910	+		PFR28_02905	0.78	+0.8
3,417,910	+		PFR28_02905	0.78	+0.1
3,417,911	-		PFR28_02905	0.78	-0.9
3,417,911	-		PFR28_02905	0.78	+0.4
3,417,911	-		PFR28_02905	0.78	+1.3
3,417,938	-		PFR28_02905	0.88	-0.4
3,417,938	-		PFR28_02905	0.88	+0.0
3,417,939	+		PFR28_02905	0.88	+1.4
3,417,970	+				+0.2
3,417,970	+				+0.9
3,417,970	+				+0.1
3,417,970	+				+0.0
3,417,970	+				-0.3
3,417,970	+				+1.7
3,417,970	+				+0.6
3,417,971	-				-1.1
3,417,971	-				-0.4
3,417,971	-				-0.2
3,417,971	-				+0.7
3,417,971	-				+0.9
3,417,971	-				+0.3
3,418,045	+		PFR28_02906	0.11	-0.1
3,418,045	+		PFR28_02906	0.11	+0.7
3,418,046	-		PFR28_02906	0.11	+1.9
3,418,046	-		PFR28_02906	0.11	-0.4
3,418,046	-		PFR28_02906	0.11	+1.2
3,418,046	-		PFR28_02906	0.11	-1.1
3,418,140	-		PFR28_02906	0.28	+0.4
3,418,199	+		PFR28_02906	0.38	-0.6
3,418,199	+		PFR28_02906	0.38	+0.8
3,418,199	+		PFR28_02906	0.38	+0.4
3,418,199	+		PFR28_02906	0.38	-0.2
3,418,200	-		PFR28_02906	0.38	+0.6
3,418,200	-		PFR28_02906	0.38	-0.2
3,418,200	-		PFR28_02906	0.38	+1.0
3,418,200	-		PFR28_02906	0.38	+0.5
3,418,200	-		PFR28_02906	0.38	+0.1
3,418,281	+		PFR28_02906	0.52	-1.9
3,418,281	+		PFR28_02906	0.52	+1.6
3,418,282	-		PFR28_02906	0.52	-1.4
3,418,368	-		PFR28_02906	0.68	+0.2
3,418,368	-		PFR28_02906	0.68	-0.7
3,418,368	-		PFR28_02906	0.68	+1.2
3,418,368	-		PFR28_02906	0.68	+0.5
3,418,368	-		PFR28_02906	0.68	-0.6
3,418,368	-		PFR28_02906	0.68	-0.3
3,418,368	-		PFR28_02906	0.68	+0.1
3,418,368	-		PFR28_02906	0.68	-0.4
3,418,410	+		PFR28_02906	0.75	-1.5
3,418,410	+		PFR28_02906	0.75	-1.4
3,418,410	+		PFR28_02906	0.75	-0.9
3,418,410	+		PFR28_02906	0.75	+0.3
3,418,411	-		PFR28_02906	0.75	+0.0
3,418,411	-		PFR28_02906	0.75	+0.1
3,418,411	-		PFR28_02906	0.75	+0.6
3,418,411	-		PFR28_02906	0.75	+0.5
3,418,411	-		PFR28_02906	0.75	+0.9
3,418,411	-		PFR28_02906	0.75	+0.5
3,418,411	-		PFR28_02906	0.75	-1.6
3,418,411	-		PFR28_02906	0.75	+0.4
3,418,411	-		PFR28_02906	0.75	+0.8
3,418,583	+				-1.0
3,418,583	+				+0.7
3,418,583	+				-0.4
3,418,583	+				-0.2
3,418,583	+				-0.4
3,418,583	+				-0.3
3,418,583	+				-0.1
3,418,583	+				+0.4
3,418,584	-				+0.2
3,418,584	-				-1.0
3,418,584	-				-0.5
3,418,585	+				+0.4
3,418,662	+				+0.4
3,418,760	-		PFR28_02907	0.16	-0.8
3,418,786	-		PFR28_02907	0.20	+0.1
3,418,951	+		PFR28_02907	0.42	+1.0
3,418,952	-		PFR28_02907	0.42	+1.1
3,418,956	-		PFR28_02907	0.43	-1.0