Strain Fitness in Pseudomonas sp. RS175 around PFR28_02625

Experiment: sn-glycero-3-phosphocholine (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sn-glycero-3-phosphocholine (C) 10 mM
3,101,374	+		PFR28_02624	0.39	+0.0
3,101,374	+		PFR28_02624	0.39	-0.8
3,101,374	+		PFR28_02624	0.39	+0.1
3,101,375	-		PFR28_02624	0.39	+1.2
3,101,457	-		PFR28_02624	0.49	+1.3
3,101,457	-		PFR28_02624	0.49	-0.8
3,101,533	+		PFR28_02624	0.59	+1.2
3,101,533	+		PFR28_02624	0.59	-1.4
3,101,533	+		PFR28_02624	0.59	+0.1
3,101,533	+		PFR28_02624	0.59	-1.4
3,101,533	+		PFR28_02624	0.59	+0.5
3,101,533	+		PFR28_02624	0.59	+0.6
3,101,533	+		PFR28_02624	0.59	+0.4
3,101,534	-		PFR28_02624	0.60	-0.1
3,101,534	-		PFR28_02624	0.60	+2.0
3,101,534	-		PFR28_02624	0.60	+0.2
3,101,534	-		PFR28_02624	0.60	+0.8
3,101,534	-		PFR28_02624	0.60	+1.6
3,101,534	-		PFR28_02624	0.60	+0.1
3,101,534	-		PFR28_02624	0.60	+0.8
3,101,534	-		PFR28_02624	0.60	-1.6
3,101,534	-		PFR28_02624	0.60	-0.9
3,101,534	-		PFR28_02624	0.60	-0.6
3,101,534	-		PFR28_02624	0.60	-0.6
3,101,534	-		PFR28_02624	0.60	-0.1
3,101,584	+		PFR28_02624	0.66	-0.9
3,101,584	+		PFR28_02624	0.66	+1.6
3,101,584	+		PFR28_02624	0.66	+0.2
3,101,584	+		PFR28_02624	0.66	+0.2
3,101,584	+		PFR28_02624	0.66	-2.4
3,101,584	+		PFR28_02624	0.66	+0.5
3,101,584	+		PFR28_02624	0.66	+0.5
3,101,585	-		PFR28_02624	0.66	+2.0
3,101,585	-		PFR28_02624	0.66	-0.9
3,101,585	-		PFR28_02624	0.66	+0.4
3,101,585	-		PFR28_02624	0.66	-0.5
3,101,585	-		PFR28_02624	0.66	+0.5
3,101,585	-		PFR28_02624	0.66	-0.4
3,101,585	-		PFR28_02624	0.66	+0.1
3,101,585	-		PFR28_02624	0.66	+0.4
3,101,585	-		PFR28_02624	0.66	-0.1
3,101,585	-		PFR28_02624	0.66	+0.5
3,101,585	-		PFR28_02624	0.66	+0.2
3,101,632	-		PFR28_02624	0.72	-0.4
3,101,646	+		PFR28_02624	0.74	+0.1
3,101,646	+		PFR28_02624	0.74	-0.1
3,101,646	+		PFR28_02624	0.74	+0.5
3,101,647	-		PFR28_02624	0.74	+0.2
3,101,647	-		PFR28_02624	0.74	+1.4
3,101,647	-		PFR28_02624	0.74	-0.4
3,101,669	+		PFR28_02624	0.77	-0.3
3,101,782	+				-1.8
3,101,782	+				+0.2
3,101,783	-				-0.6
3,101,783	-				-0.4
3,101,869	-				-1.0
3,101,869	-				+0.1
3,101,872	-				-0.1
3,101,872	-				-0.7
3,101,957	+				-0.1
3,101,958	-				-1.0
3,102,001	+				-1.7
3,102,002	-				+1.4
3,102,002	-				-0.8
3,102,026	+				+1.1
3,102,092	+				-2.8
3,102,092	+				-0.4
3,102,092	+				-0.3
3,102,093	-				-2.7
3,102,093	-				-1.3
3,102,093	-				-1.9
3,102,093	-				-0.1
3,102,093	-				-1.9
3,102,093	-				-1.5
3,102,096	+				+0.4
3,102,096	+				-0.3
3,102,096	+				-1.1
3,102,096	+				-0.1
3,102,097	-				-1.2
3,102,097	-				-2.1
3,102,097	-				-0.1
3,102,097	-				-1.6
3,102,097	-				-0.6
3,102,097	-				-3.3
3,102,166	+				-2.9
3,102,167	-				+0.2
3,102,167	-				-0.6
3,102,230	+				+0.4
3,102,230	+				-0.3
3,102,230	+				-0.7
3,102,230	+				-0.1
3,102,230	+				-0.3
3,102,230	+				-0.7
3,102,230	+				-0.8
3,102,231	-				-2.2
3,102,231	-				-0.3
3,102,231	-				-0.5
3,102,231	-				-0.7
3,102,231	-				-1.3
3,102,231	-				-2.4
3,102,231	-				-0.6
3,102,328	+				-1.1
3,102,328	+				-2.5
3,102,328	+				-0.1
3,102,328	+				-3.6
3,102,328	+				-0.5
3,102,329	-				-0.7
3,102,329	-				-1.5
3,102,329	-				-1.7
3,102,420	-				+3.0
3,102,591	+		PFR28_02625	0.19	-3.8
3,102,591	+		PFR28_02625	0.19	+0.6
3,102,623	+		PFR28_02625	0.22	-2.1
3,102,623	+		PFR28_02625	0.22	-1.9
3,102,623	+		PFR28_02625	0.22	+0.1
3,102,624	-		PFR28_02625	0.22	-1.6
3,102,624	-		PFR28_02625	0.22	-2.6
3,102,624	-		PFR28_02625	0.22	-2.5
3,102,674	+		PFR28_02625	0.26	+0.5
3,102,674	+		PFR28_02625	0.26	-2.4
3,102,674	+		PFR28_02625	0.26	-1.6
3,102,675	-		PFR28_02625	0.26	-2.0
3,102,675	-		PFR28_02625	0.26	-0.3
3,102,797	+		PFR28_02625	0.35	-0.6
3,102,797	+		PFR28_02625	0.35	-3.0
3,102,798	-		PFR28_02625	0.35	-1.1
3,102,798	-		PFR28_02625	0.35	-1.5
3,102,798	-		PFR28_02625	0.35	-0.3
3,102,798	-		PFR28_02625	0.35	-0.7
3,102,863	+		PFR28_02625	0.40	-1.6
3,102,863	+		PFR28_02625	0.40	-1.2
3,102,863	+		PFR28_02625	0.40	-1.4
3,102,864	-		PFR28_02625	0.40	-1.4
3,102,864	-		PFR28_02625	0.40	-0.1
3,102,963	+		PFR28_02625	0.47	-0.6
3,103,145	+		PFR28_02625	0.61	-1.6
3,103,146	-		PFR28_02625	0.61	-0.9
3,103,146	-		PFR28_02625	0.61	-0.1
3,103,146	-		PFR28_02625	0.61	+0.5
3,103,304	+		PFR28_02625	0.73	+0.0
3,103,304	+		PFR28_02625	0.73	-1.6
3,103,305	-		PFR28_02625	0.73	-1.8
3,103,305	-		PFR28_02625	0.73	-0.9
3,103,391	+		PFR28_02625	0.80	-0.3
3,103,391	+		PFR28_02625	0.80	-2.2
3,103,391	+		PFR28_02625	0.80	-0.6
3,103,391	+		PFR28_02625	0.80	-0.1
3,103,392	-		PFR28_02625	0.80	-1.9
3,103,392	-		PFR28_02625	0.80	+0.1
3,103,392	-		PFR28_02625	0.80	-1.1
3,103,392	-		PFR28_02625	0.80	-0.8
3,103,464	-		PFR28_02625	0.85	+0.3
3,103,464	-		PFR28_02625	0.85	-3.4
3,103,532	+				-1.4
3,103,572	-				-0.1
3,103,892	+				-1.4
3,103,892	+				+0.9
3,103,893	-				+0.3
3,103,893	-				+0.1
3,103,988	+		PFR28_02626	0.11	-0.0
3,104,063	+		PFR28_02626	0.15	-2.1
3,104,064	-		PFR28_02626	0.15	-0.7
3,104,516	+		PFR28_02626	0.39	-0.3
3,104,517	-		PFR28_02626	0.39	+0.9
3,104,622	-		PFR28_02626	0.44	-0.9
3,104,622	-		PFR28_02626	0.44	+0.7
3,104,640	-		PFR28_02626	0.45	+0.4
3,104,640	-		PFR28_02626	0.45	+0.2
3,104,640	-		PFR28_02626	0.45	+3.0