Strain Fitness in Pseudomonas sp. RS175 around PFR28_01922

Experiment: sn-glycero-3-phosphocholine (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sn-glycero-3-phosphocholine (C) 10 mM
2,178,642	+		PFR28_01920	0.87	+0.6
2,178,642	+		PFR28_01920	0.87	-0.8
2,178,643	-		PFR28_01920	0.87	+0.4
2,178,643	-		PFR28_01920	0.87	-0.9
2,178,682	+				-0.4
2,178,682	+				+0.4
2,178,682	+				-0.1
2,178,683	-				-0.2
2,178,683	-				+0.0
2,178,683	-				+0.5
2,178,683	-				+1.0
2,178,683	-				+0.3
2,178,688	+				-0.9
2,178,688	+				-0.0
2,178,688	+				-1.4
2,178,689	-				+0.9
2,178,689	-				+0.1
2,178,781	+				-0.3
2,178,847	+				+0.3
2,179,030	+		PFR28_01921	0.34	+1.3
2,179,030	+		PFR28_01921	0.34	+1.0
2,179,183	+		PFR28_01921	0.55	-0.1
2,179,183	+		PFR28_01921	0.55	-0.6
2,179,184	-		PFR28_01921	0.55	-0.3
2,179,184	-		PFR28_01921	0.55	-1.8
2,179,203	-		PFR28_01921	0.58	-0.3
2,179,357	-		PFR28_01921	0.79	+0.1
2,179,407	-		PFR28_01921	0.85	-0.9
2,179,510	+				+1.8
2,179,510	+				-2.6
2,179,510	+				-0.6
2,179,510	+				-0.4
2,179,510	+				+0.1
2,179,510	+				-0.3
2,179,510	+				+1.0
2,179,510	+				+0.6
2,179,510	+				-0.4
2,179,510	+				-1.2
2,179,510	+				-0.8
2,179,511	-				+0.3
2,179,511	-				-1.4
2,179,511	-				-0.2
2,179,511	-				-0.0
2,179,511	-				+0.3
2,179,511	-				-0.4
2,179,511	-				-0.0
2,179,511	-				-0.3
2,179,511	-				+0.5
2,179,511	-				+1.4
2,179,511	-				+0.8
2,179,511	-				-0.7
2,179,511	-				-0.3
2,179,511	-				+0.4
2,179,511	-				+0.5
2,179,511	-				-1.3
2,179,511	-				+0.2
2,179,511	-				+0.8
2,179,773	+		PFR28_01922	0.23	+0.4
2,179,773	+		PFR28_01922	0.23	+0.3
2,179,774	-		PFR28_01922	0.23	+0.6
2,179,774	-		PFR28_01922	0.23	-0.2
2,179,774	-		PFR28_01922	0.23	+1.6
2,179,976	+		PFR28_01922	0.47	+0.7
2,179,976	+		PFR28_01922	0.47	-0.6
2,179,977	-		PFR28_01922	0.48	+0.7
2,180,035	+		PFR28_01922	0.55	+0.9
2,180,035	+		PFR28_01922	0.55	+0.7
2,180,035	+		PFR28_01922	0.55	-0.4
2,180,036	-		PFR28_01922	0.55	+0.2
2,180,036	-		PFR28_01922	0.55	-0.8
2,180,420	+				-1.9
2,180,420	+				+1.1
2,180,471	+				+0.1
2,180,471	+				-0.0
2,180,471	+				+0.6
2,180,546	+		PFR28_01923	0.10	-0.6
2,180,546	+		PFR28_01923	0.10	+0.2
2,180,547	-		PFR28_01923	0.10	-0.2
2,180,547	-		PFR28_01923	0.10	-0.8
2,180,609	+		PFR28_01923	0.15	+1.0
2,180,609	+		PFR28_01923	0.15	+2.4
2,180,609	+		PFR28_01923	0.15	+0.2
2,180,609	+		PFR28_01923	0.15	+0.2
2,180,609	+		PFR28_01923	0.15	+0.2
2,180,609	+		PFR28_01923	0.15	-0.9
2,180,610	-		PFR28_01923	0.15	-1.1
2,180,610	-		PFR28_01923	0.15	-0.1
2,180,610	-		PFR28_01923	0.15	+0.4
2,180,610	-		PFR28_01923	0.15	+0.1
2,180,612	+		PFR28_01923	0.15	-0.5
2,180,613	-		PFR28_01923	0.15	-0.7
2,180,678	+		PFR28_01923	0.21	-1.8
2,180,678	+		PFR28_01923	0.21	-0.0
2,180,735	+		PFR28_01923	0.25	-0.3
2,180,735	+		PFR28_01923	0.25	-0.1
2,180,735	+		PFR28_01923	0.25	-1.1
2,180,736	-		PFR28_01923	0.25	+0.4
2,180,736	-		PFR28_01923	0.25	+0.7
2,180,736	-		PFR28_01923	0.25	+1.2
2,180,736	-		PFR28_01923	0.25	+0.2
2,180,813	+		PFR28_01923	0.31	-0.1
2,180,813	+		PFR28_01923	0.31	+1.0
2,180,813	+		PFR28_01923	0.31	-0.7
2,180,814	-		PFR28_01923	0.31	-0.7
2,180,814	-		PFR28_01923	0.31	-0.6
2,180,814	-		PFR28_01923	0.31	+0.1
2,180,814	-		PFR28_01923	0.31	-0.5
2,180,880	+		PFR28_01923	0.37	-0.1
2,181,093	-		PFR28_01923	0.54	+0.7
2,181,135	+		PFR28_01923	0.57	+0.3
2,181,136	-		PFR28_01923	0.57	-0.4
2,181,148	+		PFR28_01923	0.58	+0.2
2,181,149	-		PFR28_01923	0.58	+0.5
2,181,164	+		PFR28_01923	0.59	+0.9
2,181,164	+		PFR28_01923	0.59	-0.3
2,181,167	+		PFR28_01923	0.60	-0.1
2,181,167	+		PFR28_01923	0.60	+0.8
2,181,167	+		PFR28_01923	0.60	+0.1
2,181,167	+		PFR28_01923	0.60	-1.1
2,181,167	+		PFR28_01923	0.60	+0.4
2,181,167	+		PFR28_01923	0.60	-1.1
2,181,167	+		PFR28_01923	0.60	-0.1
2,181,168	-		PFR28_01923	0.60	-0.5
2,181,168	-		PFR28_01923	0.60	+0.2
2,181,174	+		PFR28_01923	0.60	+0.2
2,181,174	+		PFR28_01923	0.60	-2.0
2,181,174	+		PFR28_01923	0.60	+0.6
2,181,174	+		PFR28_01923	0.60	-0.4
2,181,174	+		PFR28_01923	0.60	-1.1
2,181,174	+		PFR28_01923	0.60	-0.4
2,181,174	+		PFR28_01923	0.60	+1.3
2,181,174	+		PFR28_01923	0.60	-0.3
2,181,174	+		PFR28_01923	0.60	+0.2
2,181,174	+		PFR28_01923	0.60	+0.1
2,181,174	+		PFR28_01923	0.60	+0.1
2,181,175	-		PFR28_01923	0.60	+0.2
2,181,175	-		PFR28_01923	0.60	+1.2
2,181,175	-		PFR28_01923	0.60	+0.1
2,181,175	-		PFR28_01923	0.60	-0.1
2,181,175	-		PFR28_01923	0.60	+0.3
2,181,175	-		PFR28_01923	0.60	+1.2
2,181,175	-		PFR28_01923	0.60	+0.8
2,181,175	-		PFR28_01923	0.60	+0.1
2,181,175	-		PFR28_01923	0.60	-0.3
2,181,175	-		PFR28_01923	0.60	-1.5
2,181,175	-		PFR28_01923	0.60	+0.5
2,181,175	-		PFR28_01923	0.60	-0.2
2,181,175	-		PFR28_01923	0.60	+1.2
2,181,175	-		PFR28_01923	0.60	-0.3
2,181,176	+		PFR28_01923	0.60	-0.3
2,181,177	-		PFR28_01923	0.60	-0.8
2,181,177	-		PFR28_01923	0.60	-1.1
2,181,177	-		PFR28_01923	0.60	-0.2
2,181,347	+		PFR28_01923	0.74	-0.6