Experiment: m.b. Aluminum chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4612 and Echvi_4613 are separated by 12 nucleotides Echvi_4613 and Echvi_4614 are separated by 25 nucleotides Echvi_4614 and Echvi_4615 are separated by 101 nucleotides Echvi_4615 and Echvi_4616 overlap by 8 nucleotides
Echvi_4612: Echvi_4612 - Membrane protease subunits, stomatin/prohibitin homologs, at 5,520,129 to 5,520,977
_4612
Echvi_4613: Echvi_4613 - Uncharacterized protein conserved in bacteria, at 5,520,990 to 5,521,169
_4613
Echvi_4614: Echvi_4614 - hypothetical protein, at 5,521,195 to 5,521,629
_4614
Echvi_4615: Echvi_4615 - Outer membrane protein, at 5,521,731 to 5,523,227
_4615
Echvi_4616: Echvi_4616 - ABC-type antimicrobial peptide transport system, permease component, at 5,523,220 to 5,524,581
_4616
Position (kb)
5521
5522
5523
5524 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 5520.787 kb on + strand, within Echvi_4612 at 5520.958 kb on + strand at 5520.958 kb on + strand at 5520.959 kb on - strand at 5520.959 kb on - strand at 5520.986 kb on + strand at 5521.096 kb on - strand, within Echvi_4613 at 5521.198 kb on + strand at 5521.199 kb on - strand at 5521.204 kb on + strand at 5521.205 kb on - strand at 5521.216 kb on + strand at 5521.216 kb on + strand at 5521.246 kb on - strand, within Echvi_4614 at 5521.247 kb on + strand, within Echvi_4614 at 5521.248 kb on - strand, within Echvi_4614 at 5521.248 kb on - strand, within Echvi_4614 at 5521.248 kb on - strand, within Echvi_4614 at 5521.288 kb on + strand, within Echvi_4614 at 5521.288 kb on + strand, within Echvi_4614 at 5521.288 kb on + strand, within Echvi_4614 at 5521.289 kb on - strand, within Echvi_4614 at 5521.289 kb on - strand, within Echvi_4614 at 5521.290 kb on + strand, within Echvi_4614 at 5521.290 kb on + strand, within Echvi_4614 at 5521.291 kb on - strand, within Echvi_4614 at 5521.291 kb on - strand, within Echvi_4614 at 5521.293 kb on + strand, within Echvi_4614 at 5521.293 kb on + strand, within Echvi_4614 at 5521.293 kb on + strand, within Echvi_4614 at 5521.294 kb on - strand, within Echvi_4614 at 5521.295 kb on + strand, within Echvi_4614 at 5521.298 kb on + strand, within Echvi_4614 at 5521.298 kb on + strand, within Echvi_4614 at 5521.301 kb on + strand, within Echvi_4614 at 5521.301 kb on + strand, within Echvi_4614 at 5521.331 kb on + strand, within Echvi_4614 at 5521.335 kb on + strand, within Echvi_4614 at 5521.340 kb on + strand, within Echvi_4614 at 5521.340 kb on + strand, within Echvi_4614 at 5521.340 kb on + strand, within Echvi_4614 at 5521.340 kb on + strand, within Echvi_4614 at 5521.344 kb on + strand, within Echvi_4614 at 5521.372 kb on - strand, within Echvi_4614 at 5521.413 kb on + strand, within Echvi_4614 at 5521.413 kb on + strand, within Echvi_4614 at 5521.422 kb on + strand, within Echvi_4614 at 5521.423 kb on - strand, within Echvi_4614 at 5521.423 kb on - strand at 5521.423 kb on - strand, within Echvi_4614 at 5521.423 kb on - strand, within Echvi_4614 at 5521.425 kb on - strand, within Echvi_4614 at 5521.425 kb on - strand, within Echvi_4614 at 5521.443 kb on + strand, within Echvi_4614 at 5521.444 kb on - strand, within Echvi_4614 at 5521.444 kb on - strand, within Echvi_4614 at 5521.445 kb on + strand, within Echvi_4614 at 5521.446 kb on - strand, within Echvi_4614 at 5521.446 kb on - strand, within Echvi_4614 at 5521.464 kb on + strand, within Echvi_4614 at 5521.482 kb on + strand, within Echvi_4614 at 5521.482 kb on + strand, within Echvi_4614 at 5521.484 kb on + strand, within Echvi_4614 at 5521.485 kb on - strand, within Echvi_4614 at 5521.503 kb on + strand, within Echvi_4614 at 5521.525 kb on + strand, within Echvi_4614 at 5521.634 kb on - strand at 5521.663 kb on + strand at 5521.742 kb on + strand at 5521.760 kb on + strand at 5521.761 kb on - strand at 5521.763 kb on - strand at 5521.816 kb on + strand at 5521.829 kb on - strand at 5521.829 kb on - strand at 5521.849 kb on + strand at 5521.849 kb on + strand at 5521.849 kb on + strand at 5521.849 kb on + strand at 5521.850 kb on - strand at 5521.850 kb on - strand at 5521.850 kb on - strand at 5521.850 kb on - strand at 5521.891 kb on - strand, within Echvi_4615 at 5521.891 kb on - strand, within Echvi_4615 at 5521.921 kb on + strand, within Echvi_4615 at 5522.063 kb on + strand, within Echvi_4615 at 5522.071 kb on - strand, within Echvi_4615 at 5522.091 kb on - strand, within Echvi_4615 at 5522.091 kb on - strand, within Echvi_4615 at 5522.112 kb on - strand, within Echvi_4615 at 5522.112 kb on - strand, within Echvi_4615 at 5522.142 kb on + strand, within Echvi_4615 at 5522.154 kb on + strand, within Echvi_4615 at 5522.211 kb on - strand, within Echvi_4615 at 5522.215 kb on + strand, within Echvi_4615 at 5522.221 kb on + strand, within Echvi_4615 at 5522.308 kb on - strand, within Echvi_4615 at 5522.340 kb on - strand, within Echvi_4615 at 5522.340 kb on - strand, within Echvi_4615 at 5522.423 kb on + strand, within Echvi_4615 at 5522.425 kb on + strand, within Echvi_4615 at 5522.425 kb on + strand, within Echvi_4615 at 5522.425 kb on + strand, within Echvi_4615 at 5522.425 kb on + strand, within Echvi_4615 at 5522.426 kb on - strand, within Echvi_4615 at 5522.502 kb on + strand, within Echvi_4615 at 5522.503 kb on - strand, within Echvi_4615 at 5522.548 kb on + strand, within Echvi_4615 at 5522.567 kb on + strand, within Echvi_4615 at 5522.568 kb on - strand, within Echvi_4615 at 5522.568 kb on - strand, within Echvi_4615 at 5522.612 kb on - strand, within Echvi_4615 at 5522.616 kb on + strand, within Echvi_4615 at 5522.616 kb on + strand, within Echvi_4615 at 5522.633 kb on - strand, within Echvi_4615 at 5522.636 kb on + strand, within Echvi_4615 at 5522.636 kb on + strand, within Echvi_4615 at 5522.637 kb on - strand, within Echvi_4615 at 5522.682 kb on + strand, within Echvi_4615 at 5522.686 kb on + strand, within Echvi_4615 at 5522.686 kb on + strand, within Echvi_4615 at 5522.686 kb on + strand, within Echvi_4615 at 5522.687 kb on - strand, within Echvi_4615 at 5522.687 kb on - strand, within Echvi_4615 at 5522.768 kb on - strand, within Echvi_4615 at 5522.830 kb on + strand, within Echvi_4615 at 5522.831 kb on - strand, within Echvi_4615 at 5522.856 kb on - strand, within Echvi_4615 at 5522.867 kb on + strand, within Echvi_4615 at 5522.868 kb on - strand, within Echvi_4615 at 5522.868 kb on - strand, within Echvi_4615 at 5522.944 kb on - strand, within Echvi_4615 at 5522.944 kb on - strand, within Echvi_4615 at 5522.944 kb on - strand, within Echvi_4615 at 5522.947 kb on + strand, within Echvi_4615 at 5522.947 kb on + strand, within Echvi_4615 at 5522.947 kb on + strand, within Echvi_4615 at 5522.948 kb on - strand, within Echvi_4615 at 5522.968 kb on - strand, within Echvi_4615 at 5522.976 kb on + strand, within Echvi_4615 at 5522.977 kb on - strand, within Echvi_4615 at 5522.977 kb on - strand, within Echvi_4615 at 5522.987 kb on + strand, within Echvi_4615 at 5522.988 kb on - strand, within Echvi_4615 at 5522.988 kb on - strand, within Echvi_4615 at 5522.990 kb on - strand, within Echvi_4615 at 5522.990 kb on - strand, within Echvi_4615 at 5523.028 kb on + strand, within Echvi_4615 at 5523.029 kb on - strand, within Echvi_4615 at 5523.041 kb on - strand, within Echvi_4615 at 5523.058 kb on + strand, within Echvi_4615 at 5523.122 kb on + strand at 5523.137 kb on + strand at 5523.138 kb on - strand at 5523.139 kb on + strand at 5523.179 kb on + strand at 5523.212 kb on + strand at 5523.212 kb on + strand at 5523.212 kb on + strand at 5523.221 kb on + strand at 5523.221 kb on + strand at 5523.221 kb on + strand at 5523.232 kb on + strand at 5523.295 kb on + strand at 5523.295 kb on + strand at 5523.313 kb on - strand at 5523.327 kb on + strand at 5523.327 kb on + strand at 5523.327 kb on + strand at 5523.327 kb on + strand at 5523.394 kb on + strand, within Echvi_4616 at 5523.395 kb on - strand, within Echvi_4616 at 5523.406 kb on + strand, within Echvi_4616 at 5523.407 kb on - strand, within Echvi_4616 at 5523.534 kb on + strand, within Echvi_4616 at 5523.534 kb on + strand, within Echvi_4616 at 5523.535 kb on - strand, within Echvi_4616 at 5523.547 kb on - strand, within Echvi_4616 at 5523.590 kb on - strand, within Echvi_4616 at 5523.607 kb on - strand, within Echvi_4616 at 5523.673 kb on - strand, within Echvi_4616 at 5523.673 kb on - strand, within Echvi_4616 at 5523.673 kb on - strand, within Echvi_4616 at 5523.674 kb on + strand, within Echvi_4616 at 5523.674 kb on + strand, within Echvi_4616 at 5523.674 kb on + strand, within Echvi_4616 at 5523.675 kb on - strand, within Echvi_4616 at 5523.675 kb on - strand, within Echvi_4616 at 5523.675 kb on - strand, within Echvi_4616 at 5523.675 kb on - strand, within Echvi_4616 at 5523.703 kb on + strand, within Echvi_4616 at 5523.704 kb on - strand, within Echvi_4616 at 5523.704 kb on - strand, within Echvi_4616 at 5523.771 kb on - strand, within Echvi_4616 at 5523.858 kb on + strand, within Echvi_4616 at 5523.858 kb on + strand, within Echvi_4616 at 5523.858 kb on + strand, within Echvi_4616 at 5523.859 kb on - strand, within Echvi_4616 at 5523.884 kb on - strand, within Echvi_4616 at 5523.908 kb on + strand, within Echvi_4616 at 5523.909 kb on - strand, within Echvi_4616 at 5523.909 kb on - strand, within Echvi_4616 at 5523.909 kb on - strand, within Echvi_4616 at 5523.909 kb on - strand, within Echvi_4616 at 5523.910 kb on + strand, within Echvi_4616 at 5523.910 kb on + strand, within Echvi_4616 at 5523.910 kb on + strand, within Echvi_4616 at 5523.911 kb on - strand, within Echvi_4616 at 5523.911 kb on - strand, within Echvi_4616 at 5523.921 kb on + strand, within Echvi_4616 at 5523.955 kb on - strand, within Echvi_4616 at 5524.030 kb on - strand, within Echvi_4616 at 5524.105 kb on - strand, within Echvi_4616 at 5524.213 kb on - strand, within Echvi_4616 at 5524.213 kb on - strand, within Echvi_4616
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 2 mM remove 5,520,787 + Echvi_4612 0.78 +0.4 5,520,958 + +0.2 5,520,958 + -0.6 5,520,959 - -0.3 5,520,959 - +0.2 5,520,986 + -0.1 5,521,096 - Echvi_4613 0.59 +0.5 5,521,198 + +0.5 5,521,199 - +0.5 5,521,204 + -0.3 5,521,205 - -0.0 5,521,216 + -1.1 5,521,216 + +0.7 5,521,246 - Echvi_4614 0.12 -0.9 5,521,247 + Echvi_4614 0.12 +1.4 5,521,248 - Echvi_4614 0.12 +0.3 5,521,248 - Echvi_4614 0.12 -0.8 5,521,248 - Echvi_4614 0.12 +0.1 5,521,288 + Echvi_4614 0.21 +0.6 5,521,288 + Echvi_4614 0.21 +1.0 5,521,288 + Echvi_4614 0.21 -0.1 5,521,289 - Echvi_4614 0.22 -0.9 5,521,289 - Echvi_4614 0.22 +3.2 5,521,290 + Echvi_4614 0.22 -0.3 5,521,290 + Echvi_4614 0.22 +1.1 5,521,291 - Echvi_4614 0.22 +1.6 5,521,291 - Echvi_4614 0.22 -1.0 5,521,293 + Echvi_4614 0.23 -0.7 5,521,293 + Echvi_4614 0.23 +1.9 5,521,293 + Echvi_4614 0.23 -0.1 5,521,294 - Echvi_4614 0.23 -0.3 5,521,295 + Echvi_4614 0.23 +0.4 5,521,298 + Echvi_4614 0.24 -0.4 5,521,298 + Echvi_4614 0.24 +0.6 5,521,301 + Echvi_4614 0.24 -0.2 5,521,301 + Echvi_4614 0.24 -1.4 5,521,331 + Echvi_4614 0.31 -0.3 5,521,335 + Echvi_4614 0.32 -0.5 5,521,340 + Echvi_4614 0.33 -1.9 5,521,340 + Echvi_4614 0.33 -1.8 5,521,340 + Echvi_4614 0.33 -0.8 5,521,340 + Echvi_4614 0.33 +1.6 5,521,344 + Echvi_4614 0.34 +1.0 5,521,372 - Echvi_4614 0.41 +0.3 5,521,413 + Echvi_4614 0.50 -0.5 5,521,413 + Echvi_4614 0.50 -1.1 5,521,422 + Echvi_4614 0.52 -3.1 5,521,423 - Echvi_4614 0.52 -0.5 5,521,423 - +0.3 5,521,423 - Echvi_4614 0.52 +0.5 5,521,423 - Echvi_4614 0.52 -0.2 5,521,425 - Echvi_4614 0.53 -0.4 5,521,425 - Echvi_4614 0.53 +0.5 5,521,443 + Echvi_4614 0.57 +0.3 5,521,444 - Echvi_4614 0.57 +0.9 5,521,444 - Echvi_4614 0.57 -1.5 5,521,445 + Echvi_4614 0.57 -0.5 5,521,446 - Echvi_4614 0.58 +0.9 5,521,446 - Echvi_4614 0.58 -0.3 5,521,464 + Echvi_4614 0.62 +0.1 5,521,482 + Echvi_4614 0.66 -0.9 5,521,482 + Echvi_4614 0.66 -0.7 5,521,484 + Echvi_4614 0.66 +1.2 5,521,485 - Echvi_4614 0.67 +0.2 5,521,503 + Echvi_4614 0.71 -2.7 5,521,525 + Echvi_4614 0.76 +0.3 5,521,634 - +0.3 5,521,663 + -0.1 5,521,742 + -0.6 5,521,760 + -0.4 5,521,761 - +0.2 5,521,763 - +0.3 5,521,816 + -0.7 5,521,829 - -0.3 5,521,829 - -0.1 5,521,849 + -0.1 5,521,849 + -0.1 5,521,849 + -1.3 5,521,849 + +0.7 5,521,850 - +1.5 5,521,850 - +0.9 5,521,850 - +1.9 5,521,850 - +0.4 5,521,891 - Echvi_4615 0.11 +0.2 5,521,891 - Echvi_4615 0.11 -0.2 5,521,921 + Echvi_4615 0.13 -0.6 5,522,063 + Echvi_4615 0.22 +0.5 5,522,071 - Echvi_4615 0.23 +0.8 5,522,091 - Echvi_4615 0.24 -1.5 5,522,091 - Echvi_4615 0.24 -0.7 5,522,112 - Echvi_4615 0.25 -0.9 5,522,112 - Echvi_4615 0.25 +1.1 5,522,142 + Echvi_4615 0.27 +1.4 5,522,154 + Echvi_4615 0.28 +0.9 5,522,211 - Echvi_4615 0.32 +0.2 5,522,215 + Echvi_4615 0.32 -0.5 5,522,221 + Echvi_4615 0.33 +0.6 5,522,308 - Echvi_4615 0.39 -0.3 5,522,340 - Echvi_4615 0.41 -1.1 5,522,340 - Echvi_4615 0.41 +2.1 5,522,423 + Echvi_4615 0.46 -0.2 5,522,425 + Echvi_4615 0.46 -0.5 5,522,425 + Echvi_4615 0.46 +0.9 5,522,425 + Echvi_4615 0.46 +0.4 5,522,425 + Echvi_4615 0.46 +0.8 5,522,426 - Echvi_4615 0.46 +4.4 5,522,502 + Echvi_4615 0.52 -0.2 5,522,503 - Echvi_4615 0.52 +2.0 5,522,548 + Echvi_4615 0.55 -0.0 5,522,567 + Echvi_4615 0.56 -0.9 5,522,568 - Echvi_4615 0.56 -1.4 5,522,568 - Echvi_4615 0.56 +0.3 5,522,612 - Echvi_4615 0.59 +0.1 5,522,616 + Echvi_4615 0.59 +0.5 5,522,616 + Echvi_4615 0.59 +1.6 5,522,633 - Echvi_4615 0.60 +0.3 5,522,636 + Echvi_4615 0.60 -0.0 5,522,636 + Echvi_4615 0.60 +0.1 5,522,637 - Echvi_4615 0.61 -0.9 5,522,682 + Echvi_4615 0.64 +0.1 5,522,686 + Echvi_4615 0.64 -0.6 5,522,686 + Echvi_4615 0.64 +0.4 5,522,686 + Echvi_4615 0.64 +1.9 5,522,687 - Echvi_4615 0.64 -1.1 5,522,687 - Echvi_4615 0.64 +1.3 5,522,768 - Echvi_4615 0.69 +0.8 5,522,830 + Echvi_4615 0.73 -0.7 5,522,831 - Echvi_4615 0.73 +0.4 5,522,856 - Echvi_4615 0.75 -0.3 5,522,867 + Echvi_4615 0.76 -1.0 5,522,868 - Echvi_4615 0.76 +0.8 5,522,868 - Echvi_4615 0.76 +0.3 5,522,944 - Echvi_4615 0.81 +0.6 5,522,944 - Echvi_4615 0.81 -1.3 5,522,944 - Echvi_4615 0.81 +1.2 5,522,947 + Echvi_4615 0.81 +1.1 5,522,947 + Echvi_4615 0.81 +0.0 5,522,947 + Echvi_4615 0.81 +0.2 5,522,948 - Echvi_4615 0.81 +0.5 5,522,968 - Echvi_4615 0.83 +0.9 5,522,976 + Echvi_4615 0.83 -0.1 5,522,977 - Echvi_4615 0.83 +0.5 5,522,977 - Echvi_4615 0.83 +1.7 5,522,987 + Echvi_4615 0.84 -0.4 5,522,988 - Echvi_4615 0.84 +0.2 5,522,988 - Echvi_4615 0.84 -0.4 5,522,990 - Echvi_4615 0.84 -0.5 5,522,990 - Echvi_4615 0.84 +0.1 5,523,028 + Echvi_4615 0.87 +0.7 5,523,029 - Echvi_4615 0.87 +0.2 5,523,041 - Echvi_4615 0.88 +1.5 5,523,058 + Echvi_4615 0.89 +0.3 5,523,122 + +0.6 5,523,137 + +1.2 5,523,138 - +0.8 5,523,139 + -1.0 5,523,179 + +0.7 5,523,212 + +0.5 5,523,212 + -1.8 5,523,212 + -0.1 5,523,221 + +0.3 5,523,221 + -1.6 5,523,221 + +1.9 5,523,232 + +0.9 5,523,295 + -0.3 5,523,295 + -0.0 5,523,313 - -0.6 5,523,327 + +0.2 5,523,327 + +1.1 5,523,327 + -1.1 5,523,327 + +0.6 5,523,394 + Echvi_4616 0.13 -1.2 5,523,395 - Echvi_4616 0.13 +0.5 5,523,406 + Echvi_4616 0.14 -0.9 5,523,407 - Echvi_4616 0.14 +0.8 5,523,534 + Echvi_4616 0.23 +0.9 5,523,534 + Echvi_4616 0.23 +0.1 5,523,535 - Echvi_4616 0.23 +1.1 5,523,547 - Echvi_4616 0.24 -1.6 5,523,590 - Echvi_4616 0.27 -0.1 5,523,607 - Echvi_4616 0.28 +0.3 5,523,673 - Echvi_4616 0.33 +1.1 5,523,673 - Echvi_4616 0.33 +1.3 5,523,673 - Echvi_4616 0.33 -0.5 5,523,674 + Echvi_4616 0.33 -0.8 5,523,674 + Echvi_4616 0.33 -1.1 5,523,674 + Echvi_4616 0.33 +0.3 5,523,675 - Echvi_4616 0.33 +0.1 5,523,675 - Echvi_4616 0.33 +0.3 5,523,675 - Echvi_4616 0.33 +0.1 5,523,675 - Echvi_4616 0.33 -1.0 5,523,703 + Echvi_4616 0.35 +0.9 5,523,704 - Echvi_4616 0.36 +0.2 5,523,704 - Echvi_4616 0.36 +0.1 5,523,771 - Echvi_4616 0.40 +0.8 5,523,858 + Echvi_4616 0.47 +0.4 5,523,858 + Echvi_4616 0.47 +0.6 5,523,858 + Echvi_4616 0.47 +0.6 5,523,859 - Echvi_4616 0.47 -1.5 5,523,884 - Echvi_4616 0.49 +0.1 5,523,908 + Echvi_4616 0.51 -1.6 5,523,909 - Echvi_4616 0.51 -1.5 5,523,909 - Echvi_4616 0.51 -0.2 5,523,909 - Echvi_4616 0.51 +0.1 5,523,909 - Echvi_4616 0.51 +0.5 5,523,910 + Echvi_4616 0.51 +1.1 5,523,910 + Echvi_4616 0.51 -1.1 5,523,910 + Echvi_4616 0.51 +1.6 5,523,911 - Echvi_4616 0.51 -0.1 5,523,911 - Echvi_4616 0.51 +0.6 5,523,921 + Echvi_4616 0.51 -1.9 5,523,955 - Echvi_4616 0.54 +0.1 5,524,030 - Echvi_4616 0.59 -0.6 5,524,105 - Echvi_4616 0.65 -0.5 5,524,213 - Echvi_4616 0.73 +1.2 5,524,213 - Echvi_4616 0.73 -1.5
Or see this region's nucleotide sequence