Experiment: m.b. Aluminum chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3955 and Echvi_3956 are separated by 52 nucleotides Echvi_3956 and Echvi_3957 are separated by 142 nucleotides Echvi_3957 and Echvi_3958 are separated by 21 nucleotides Echvi_3958 and Echvi_3959 are separated by 3 nucleotides
Echvi_3955: Echvi_3955 - Exonuclease VII small subunit., at 4,740,722 to 4,740,928
_3955
Echvi_3956: Echvi_3956 - Transcriptional regulator, at 4,740,981 to 4,741,625
_3956
Echvi_3957: Echvi_3957 - DNA ligase, NAD-dependent, at 4,741,768 to 4,744,230
_3957
Echvi_3958: Echvi_3958 - hypothetical protein, at 4,744,252 to 4,744,740
_3958
Echvi_3959: Echvi_3959 - dihydrodipicolinate synthase, at 4,744,744 to 4,745,604
_3959
Position (kb)
4741
4742
4743
4744
4745 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4740.852 kb on + strand, within Echvi_3955 at 4740.898 kb on - strand, within Echvi_3955 at 4740.947 kb on + strand at 4740.948 kb on - strand at 4740.949 kb on + strand at 4741.001 kb on - strand at 4741.001 kb on - strand at 4741.001 kb on - strand at 4741.038 kb on + strand at 4741.038 kb on + strand at 4741.041 kb on - strand at 4741.061 kb on - strand, within Echvi_3956 at 4741.261 kb on + strand, within Echvi_3956 at 4741.262 kb on - strand, within Echvi_3956 at 4741.262 kb on - strand, within Echvi_3956 at 4741.262 kb on - strand, within Echvi_3956 at 4741.446 kb on - strand, within Echvi_3956 at 4741.560 kb on + strand, within Echvi_3956 at 4741.650 kb on - strand at 4741.650 kb on - strand at 4741.652 kb on - strand at 4741.655 kb on + strand at 4741.655 kb on + strand at 4741.655 kb on + strand at 4741.655 kb on + strand at 4741.656 kb on - strand at 4741.656 kb on - strand at 4741.656 kb on - strand at 4741.656 kb on - strand at 4741.656 kb on - strand at 4741.656 kb on - strand at 4744.252 kb on - strand at 4744.441 kb on + strand, within Echvi_3958 at 4744.441 kb on + strand, within Echvi_3958 at 4744.441 kb on + strand, within Echvi_3958 at 4744.441 kb on + strand, within Echvi_3958 at 4744.442 kb on - strand, within Echvi_3958 at 4744.442 kb on - strand, within Echvi_3958 at 4744.442 kb on - strand, within Echvi_3958 at 4744.444 kb on + strand, within Echvi_3958 at 4744.444 kb on + strand, within Echvi_3958 at 4744.445 kb on - strand, within Echvi_3958 at 4744.584 kb on + strand, within Echvi_3958 at 4744.584 kb on + strand, within Echvi_3958 at 4744.656 kb on - strand, within Echvi_3958 at 4744.665 kb on - strand, within Echvi_3958
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 2 mM remove 4,740,852 + Echvi_3955 0.63 +2.0 4,740,898 - Echvi_3955 0.85 -0.2 4,740,947 + +1.3 4,740,948 - -2.2 4,740,949 + -0.3 4,741,001 - -0.1 4,741,001 - +0.2 4,741,001 - -0.8 4,741,038 + -1.0 4,741,038 + -0.5 4,741,041 - -0.3 4,741,061 - Echvi_3956 0.12 -0.4 4,741,261 + Echvi_3956 0.43 +0.2 4,741,262 - Echvi_3956 0.44 -0.3 4,741,262 - Echvi_3956 0.44 -1.8 4,741,262 - Echvi_3956 0.44 -0.5 4,741,446 - Echvi_3956 0.72 -1.0 4,741,560 + Echvi_3956 0.90 -0.3 4,741,650 - -0.2 4,741,650 - -1.1 4,741,652 - +0.2 4,741,655 + -0.9 4,741,655 + -2.8 4,741,655 + -1.1 4,741,655 + -0.2 4,741,656 - +0.2 4,741,656 - +2.2 4,741,656 - +0.5 4,741,656 - +0.7 4,741,656 - +0.2 4,741,656 - +0.4 4,744,252 - -2.0 4,744,441 + Echvi_3958 0.39 -0.1 4,744,441 + Echvi_3958 0.39 +0.5 4,744,441 + Echvi_3958 0.39 -1.5 4,744,441 + Echvi_3958 0.39 -0.5 4,744,442 - Echvi_3958 0.39 -0.1 4,744,442 - Echvi_3958 0.39 -0.3 4,744,442 - Echvi_3958 0.39 -0.2 4,744,444 + Echvi_3958 0.39 -1.4 4,744,444 + Echvi_3958 0.39 +0.2 4,744,445 - Echvi_3958 0.39 -1.4 4,744,584 + Echvi_3958 0.68 +0.5 4,744,584 + Echvi_3958 0.68 +1.3 4,744,656 - Echvi_3958 0.83 +2.0 4,744,665 - Echvi_3958 0.84 -2.8
Or see this region's nucleotide sequence