Experiment: m.b. Aluminum chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3830 and Echvi_3831 are separated by 17 nucleotides Echvi_3831 and Echvi_3832 are separated by 252 nucleotides
Echvi_3830: Echvi_3830 - Glutamate decarboxylase and related PLP-dependent proteins, at 4,576,549 to 4,577,925
_3830
Echvi_3831: Echvi_3831 - hypothetical protein, at 4,577,943 to 4,578,344
_3831
Echvi_3832: Echvi_3832 - hypothetical protein, at 4,578,597 to 4,580,153
_3832
Position (kb)
4577
4578
4579 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4576.974 kb on + strand, within Echvi_3830 at 4576.975 kb on - strand, within Echvi_3830 at 4577.074 kb on - strand, within Echvi_3830 at 4577.147 kb on + strand, within Echvi_3830 at 4577.147 kb on + strand, within Echvi_3830 at 4577.147 kb on + strand, within Echvi_3830 at 4577.148 kb on - strand, within Echvi_3830 at 4577.148 kb on - strand, within Echvi_3830 at 4577.265 kb on + strand, within Echvi_3830 at 4577.331 kb on + strand, within Echvi_3830 at 4577.333 kb on + strand, within Echvi_3830 at 4577.333 kb on + strand, within Echvi_3830 at 4577.333 kb on + strand, within Echvi_3830 at 4577.333 kb on + strand, within Echvi_3830 at 4577.333 kb on + strand, within Echvi_3830 at 4577.333 kb on + strand, within Echvi_3830 at 4577.333 kb on + strand, within Echvi_3830 at 4577.333 kb on + strand, within Echvi_3830 at 4577.334 kb on - strand, within Echvi_3830 at 4577.334 kb on - strand, within Echvi_3830 at 4577.334 kb on - strand, within Echvi_3830 at 4577.334 kb on - strand, within Echvi_3830 at 4577.334 kb on - strand, within Echvi_3830 at 4577.384 kb on + strand, within Echvi_3830 at 4577.385 kb on - strand, within Echvi_3830 at 4577.528 kb on - strand, within Echvi_3830 at 4577.528 kb on - strand, within Echvi_3830 at 4577.592 kb on - strand, within Echvi_3830 at 4577.634 kb on + strand, within Echvi_3830 at 4577.634 kb on + strand, within Echvi_3830 at 4577.635 kb on - strand, within Echvi_3830 at 4577.695 kb on - strand, within Echvi_3830 at 4577.695 kb on - strand, within Echvi_3830 at 4577.789 kb on + strand at 4577.816 kb on + strand at 4577.817 kb on - strand at 4577.829 kb on + strand at 4577.837 kb on - strand at 4577.871 kb on + strand at 4577.957 kb on + strand at 4577.957 kb on + strand at 4577.957 kb on + strand at 4577.958 kb on - strand at 4577.965 kb on + strand at 4577.965 kb on + strand at 4577.965 kb on + strand at 4577.966 kb on - strand at 4577.966 kb on - strand at 4577.967 kb on + strand at 4577.967 kb on + strand at 4577.968 kb on - strand at 4577.968 kb on - strand at 4577.976 kb on - strand at 4577.976 kb on - strand at 4577.995 kb on + strand, within Echvi_3831 at 4578.029 kb on + strand, within Echvi_3831 at 4578.030 kb on - strand, within Echvi_3831 at 4578.030 kb on - strand, within Echvi_3831 at 4578.035 kb on + strand, within Echvi_3831 at 4578.035 kb on + strand, within Echvi_3831 at 4578.036 kb on - strand, within Echvi_3831 at 4578.100 kb on - strand, within Echvi_3831 at 4578.106 kb on + strand, within Echvi_3831 at 4578.107 kb on - strand, within Echvi_3831 at 4578.110 kb on + strand, within Echvi_3831 at 4578.110 kb on + strand, within Echvi_3831 at 4578.111 kb on - strand, within Echvi_3831 at 4578.111 kb on - strand, within Echvi_3831 at 4578.111 kb on - strand, within Echvi_3831 at 4578.111 kb on - strand, within Echvi_3831 at 4578.141 kb on - strand, within Echvi_3831 at 4578.141 kb on - strand, within Echvi_3831 at 4578.141 kb on - strand, within Echvi_3831 at 4578.152 kb on + strand, within Echvi_3831 at 4578.153 kb on - strand, within Echvi_3831 at 4578.155 kb on + strand, within Echvi_3831 at 4578.219 kb on + strand, within Echvi_3831 at 4578.219 kb on + strand, within Echvi_3831 at 4578.231 kb on + strand, within Echvi_3831 at 4578.231 kb on + strand, within Echvi_3831 at 4578.295 kb on - strand, within Echvi_3831 at 4578.300 kb on + strand, within Echvi_3831 at 4578.310 kb on - strand at 4578.321 kb on + strand at 4578.323 kb on + strand at 4578.323 kb on + strand at 4578.339 kb on + strand at 4578.339 kb on + strand at 4578.339 kb on + strand at 4578.339 kb on + strand at 4578.344 kb on + strand at 4578.344 kb on + strand at 4578.344 kb on + strand at 4578.344 kb on + strand at 4578.374 kb on + strand at 4578.374 kb on + strand at 4578.374 kb on + strand at 4578.374 kb on + strand at 4578.443 kb on + strand at 4578.444 kb on + strand at 4578.444 kb on + strand at 4578.445 kb on - strand at 4578.445 kb on - strand at 4578.445 kb on - strand at 4578.445 kb on - strand at 4578.445 kb on - strand at 4578.445 kb on - strand at 4578.445 kb on - strand at 4578.445 kb on - strand at 4578.446 kb on + strand at 4578.495 kb on + strand at 4578.505 kb on + strand at 4578.519 kb on + strand at 4578.519 kb on + strand at 4578.520 kb on - strand at 4578.523 kb on - strand at 4578.523 kb on - strand at 4578.570 kb on + strand at 4578.576 kb on + strand at 4578.576 kb on + strand at 4578.577 kb on - strand at 4578.580 kb on - strand at 4578.591 kb on + strand at 4578.592 kb on - strand at 4578.609 kb on + strand at 4578.698 kb on - strand at 4578.738 kb on + strand at 4578.738 kb on + strand at 4578.782 kb on - strand, within Echvi_3832 at 4578.831 kb on + strand, within Echvi_3832 at 4578.917 kb on - strand, within Echvi_3832 at 4579.018 kb on - strand, within Echvi_3832 at 4579.040 kb on - strand, within Echvi_3832 at 4579.040 kb on - strand, within Echvi_3832 at 4579.055 kb on + strand, within Echvi_3832 at 4579.056 kb on - strand, within Echvi_3832 at 4579.056 kb on - strand, within Echvi_3832 at 4579.128 kb on + strand, within Echvi_3832 at 4579.151 kb on + strand, within Echvi_3832 at 4579.172 kb on - strand, within Echvi_3832 at 4579.192 kb on + strand, within Echvi_3832 at 4579.223 kb on + strand, within Echvi_3832 at 4579.283 kb on + strand, within Echvi_3832 at 4579.284 kb on - strand, within Echvi_3832 at 4579.294 kb on + strand, within Echvi_3832 at 4579.294 kb on + strand, within Echvi_3832 at 4579.295 kb on - strand, within Echvi_3832 at 4579.295 kb on - strand, within Echvi_3832 at 4579.295 kb on - strand, within Echvi_3832 at 4579.306 kb on + strand, within Echvi_3832 at 4579.306 kb on + strand, within Echvi_3832 at 4579.306 kb on + strand, within Echvi_3832 at 4579.306 kb on + strand, within Echvi_3832 at 4579.306 kb on + strand, within Echvi_3832 at 4579.316 kb on + strand, within Echvi_3832 at 4579.316 kb on + strand, within Echvi_3832 at 4579.327 kb on + strand, within Echvi_3832 at 4579.327 kb on + strand, within Echvi_3832 at 4579.327 kb on + strand, within Echvi_3832 at 4579.328 kb on - strand, within Echvi_3832 at 4579.334 kb on - strand, within Echvi_3832
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 2 mM remove 4,576,974 + Echvi_3830 0.31 +2.0 4,576,975 - Echvi_3830 0.31 -0.1 4,577,074 - Echvi_3830 0.38 -0.6 4,577,147 + Echvi_3830 0.43 -0.4 4,577,147 + Echvi_3830 0.43 +1.6 4,577,147 + Echvi_3830 0.43 -0.3 4,577,148 - Echvi_3830 0.44 +0.1 4,577,148 - Echvi_3830 0.44 +1.8 4,577,265 + Echvi_3830 0.52 +0.2 4,577,331 + Echvi_3830 0.57 -1.5 4,577,333 + Echvi_3830 0.57 -0.6 4,577,333 + Echvi_3830 0.57 +1.0 4,577,333 + Echvi_3830 0.57 -0.4 4,577,333 + Echvi_3830 0.57 -0.0 4,577,333 + Echvi_3830 0.57 -0.3 4,577,333 + Echvi_3830 0.57 -0.2 4,577,333 + Echvi_3830 0.57 +0.1 4,577,333 + Echvi_3830 0.57 +0.1 4,577,334 - Echvi_3830 0.57 +0.3 4,577,334 - Echvi_3830 0.57 -0.6 4,577,334 - Echvi_3830 0.57 -2.5 4,577,334 - Echvi_3830 0.57 -1.5 4,577,334 - Echvi_3830 0.57 -0.2 4,577,384 + Echvi_3830 0.61 +0.6 4,577,385 - Echvi_3830 0.61 -0.4 4,577,528 - Echvi_3830 0.71 -0.5 4,577,528 - Echvi_3830 0.71 +0.6 4,577,592 - Echvi_3830 0.76 -0.4 4,577,634 + Echvi_3830 0.79 -0.4 4,577,634 + Echvi_3830 0.79 -0.3 4,577,635 - Echvi_3830 0.79 -1.3 4,577,695 - Echvi_3830 0.83 +3.3 4,577,695 - Echvi_3830 0.83 -0.1 4,577,789 + -0.0 4,577,816 + -0.3 4,577,817 - -0.8 4,577,829 + -1.0 4,577,837 - +0.5 4,577,871 + -0.4 4,577,957 + +0.7 4,577,957 + -2.3 4,577,957 + -0.1 4,577,958 - -0.3 4,577,965 + -0.1 4,577,965 + -1.4 4,577,965 + -1.1 4,577,966 - +0.5 4,577,966 - +0.4 4,577,967 + +0.9 4,577,967 + -0.2 4,577,968 - -0.3 4,577,968 - +1.1 4,577,976 - -2.1 4,577,976 - +1.1 4,577,995 + Echvi_3831 0.13 -0.2 4,578,029 + Echvi_3831 0.21 -2.4 4,578,030 - Echvi_3831 0.22 +0.0 4,578,030 - Echvi_3831 0.22 -2.3 4,578,035 + Echvi_3831 0.23 -1.4 4,578,035 + Echvi_3831 0.23 -0.1 4,578,036 - Echvi_3831 0.23 -0.4 4,578,100 - Echvi_3831 0.39 -1.2 4,578,106 + Echvi_3831 0.41 -1.0 4,578,107 - Echvi_3831 0.41 -0.4 4,578,110 + Echvi_3831 0.42 +0.3 4,578,110 + Echvi_3831 0.42 -1.2 4,578,111 - Echvi_3831 0.42 +0.6 4,578,111 - Echvi_3831 0.42 -0.4 4,578,111 - Echvi_3831 0.42 -0.0 4,578,111 - Echvi_3831 0.42 -1.4 4,578,141 - Echvi_3831 0.49 +1.2 4,578,141 - Echvi_3831 0.49 -0.4 4,578,141 - Echvi_3831 0.49 -1.4 4,578,152 + Echvi_3831 0.52 +0.3 4,578,153 - Echvi_3831 0.52 -0.8 4,578,155 + Echvi_3831 0.53 -1.3 4,578,219 + Echvi_3831 0.69 +0.4 4,578,219 + Echvi_3831 0.69 -0.9 4,578,231 + Echvi_3831 0.72 +0.3 4,578,231 + Echvi_3831 0.72 -1.4 4,578,295 - Echvi_3831 0.88 +1.9 4,578,300 + Echvi_3831 0.89 +1.1 4,578,310 - -0.9 4,578,321 + -0.6 4,578,323 + +1.9 4,578,323 + +0.6 4,578,339 + -1.7 4,578,339 + +0.1 4,578,339 + +0.4 4,578,339 + -0.2 4,578,344 + -0.0 4,578,344 + -1.3 4,578,344 + +0.6 4,578,344 + -0.6 4,578,374 + -0.4 4,578,374 + -1.7 4,578,374 + +0.6 4,578,374 + +1.2 4,578,443 + +0.7 4,578,444 + -0.0 4,578,444 + +1.7 4,578,445 - -0.2 4,578,445 - -1.9 4,578,445 - -0.1 4,578,445 - +0.6 4,578,445 - -2.0 4,578,445 - -0.7 4,578,445 - +0.4 4,578,445 - -0.3 4,578,446 + +0.7 4,578,495 + +0.9 4,578,505 + +0.9 4,578,519 + -1.7 4,578,519 + +0.3 4,578,520 - -0.6 4,578,523 - -0.9 4,578,523 - -1.0 4,578,570 + +0.7 4,578,576 + -1.4 4,578,576 + -0.2 4,578,577 - +0.4 4,578,580 - -2.6 4,578,591 + +0.5 4,578,592 - +0.7 4,578,609 + -1.6 4,578,698 - -1.7 4,578,738 + -2.9 4,578,738 + -0.3 4,578,782 - Echvi_3832 0.12 -2.3 4,578,831 + Echvi_3832 0.15 -0.5 4,578,917 - Echvi_3832 0.21 -0.7 4,579,018 - Echvi_3832 0.27 -0.9 4,579,040 - Echvi_3832 0.28 -0.6 4,579,040 - Echvi_3832 0.28 -0.9 4,579,055 + Echvi_3832 0.29 +0.5 4,579,056 - Echvi_3832 0.29 +1.7 4,579,056 - Echvi_3832 0.29 +0.7 4,579,128 + Echvi_3832 0.34 -0.8 4,579,151 + Echvi_3832 0.36 -0.7 4,579,172 - Echvi_3832 0.37 -0.3 4,579,192 + Echvi_3832 0.38 -1.3 4,579,223 + Echvi_3832 0.40 +0.3 4,579,283 + Echvi_3832 0.44 +0.8 4,579,284 - Echvi_3832 0.44 -0.4 4,579,294 + Echvi_3832 0.45 +0.1 4,579,294 + Echvi_3832 0.45 -0.3 4,579,295 - Echvi_3832 0.45 -1.4 4,579,295 - Echvi_3832 0.45 -0.4 4,579,295 - Echvi_3832 0.45 -0.3 4,579,306 + Echvi_3832 0.46 -1.9 4,579,306 + Echvi_3832 0.46 -0.1 4,579,306 + Echvi_3832 0.46 -0.2 4,579,306 + Echvi_3832 0.46 -0.9 4,579,306 + Echvi_3832 0.46 -0.7 4,579,316 + Echvi_3832 0.46 +0.6 4,579,316 + Echvi_3832 0.46 +0.6 4,579,327 + Echvi_3832 0.47 -0.0 4,579,327 + Echvi_3832 0.47 -0.7 4,579,327 + Echvi_3832 0.47 +0.6 4,579,328 - Echvi_3832 0.47 -0.6 4,579,334 - Echvi_3832 0.47 -0.1
Or see this region's nucleotide sequence