Experiment: m.b. Aluminum chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3697 and Echvi_3698 are separated by 8 nucleotides Echvi_3698 and Echvi_3699 are separated by 178 nucleotides
Echvi_3697: Echvi_3697 - hypothetical protein, at 4,403,704 to 4,404,660
_3697
Echvi_3698: Echvi_3698 - Putative hemolysin, at 4,404,669 to 4,405,517
_3698
Echvi_3699: Echvi_3699 - hypothetical protein, at 4,405,696 to 4,406,496
_3699
Position (kb)
4404
4405
4406 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4403.770 kb on - strand at 4403.877 kb on + strand, within Echvi_3697 at 4403.879 kb on + strand, within Echvi_3697 at 4403.880 kb on - strand, within Echvi_3697 at 4403.883 kb on + strand, within Echvi_3697 at 4403.884 kb on - strand, within Echvi_3697 at 4403.920 kb on + strand, within Echvi_3697 at 4403.931 kb on + strand, within Echvi_3697 at 4403.931 kb on + strand, within Echvi_3697 at 4404.000 kb on + strand, within Echvi_3697 at 4404.000 kb on + strand, within Echvi_3697 at 4404.001 kb on - strand, within Echvi_3697 at 4404.001 kb on - strand, within Echvi_3697 at 4404.003 kb on - strand, within Echvi_3697 at 4404.065 kb on + strand, within Echvi_3697 at 4404.104 kb on + strand, within Echvi_3697 at 4404.112 kb on + strand, within Echvi_3697 at 4404.113 kb on - strand, within Echvi_3697 at 4404.264 kb on - strand, within Echvi_3697 at 4404.325 kb on + strand, within Echvi_3697 at 4404.325 kb on + strand, within Echvi_3697 at 4404.355 kb on - strand, within Echvi_3697 at 4404.441 kb on + strand, within Echvi_3697 at 4404.442 kb on - strand, within Echvi_3697 at 4404.455 kb on - strand, within Echvi_3697 at 4404.492 kb on + strand, within Echvi_3697 at 4404.492 kb on + strand, within Echvi_3697 at 4404.585 kb on + strand at 4404.586 kb on - strand at 4404.646 kb on + strand at 4404.647 kb on - strand at 4404.649 kb on + strand at 4404.649 kb on + strand at 4404.777 kb on + strand, within Echvi_3698 at 4404.777 kb on + strand, within Echvi_3698 at 4404.777 kb on + strand, within Echvi_3698 at 4404.778 kb on - strand, within Echvi_3698 at 4404.778 kb on - strand, within Echvi_3698 at 4404.778 kb on - strand, within Echvi_3698 at 4404.778 kb on - strand, within Echvi_3698 at 4405.048 kb on + strand, within Echvi_3698 at 4405.059 kb on + strand, within Echvi_3698 at 4405.136 kb on + strand, within Echvi_3698 at 4405.146 kb on - strand, within Echvi_3698 at 4405.177 kb on + strand, within Echvi_3698 at 4405.280 kb on + strand, within Echvi_3698 at 4405.348 kb on + strand, within Echvi_3698 at 4405.399 kb on + strand, within Echvi_3698 at 4405.428 kb on + strand, within Echvi_3698 at 4405.473 kb on - strand at 4405.582 kb on - strand at 4405.582 kb on - strand at 4405.582 kb on - strand at 4405.592 kb on + strand at 4405.660 kb on + strand at 4405.660 kb on + strand at 4405.739 kb on + strand at 4405.739 kb on + strand at 4405.739 kb on + strand at 4405.739 kb on + strand at 4405.739 kb on + strand at 4405.739 kb on + strand at 4405.739 kb on + strand at 4405.739 kb on + strand at 4405.739 kb on + strand at 4405.739 kb on + strand at 4405.739 kb on + strand at 4405.740 kb on - strand at 4405.740 kb on - strand at 4405.740 kb on - strand at 4405.740 kb on - strand at 4405.829 kb on + strand, within Echvi_3699 at 4405.830 kb on - strand, within Echvi_3699 at 4405.830 kb on - strand, within Echvi_3699 at 4405.833 kb on + strand, within Echvi_3699 at 4405.833 kb on + strand, within Echvi_3699 at 4405.833 kb on + strand, within Echvi_3699 at 4405.833 kb on + strand, within Echvi_3699 at 4405.833 kb on + strand, within Echvi_3699 at 4405.860 kb on + strand, within Echvi_3699 at 4405.860 kb on + strand, within Echvi_3699 at 4405.860 kb on + strand, within Echvi_3699 at 4405.861 kb on - strand, within Echvi_3699 at 4405.884 kb on - strand, within Echvi_3699 at 4405.931 kb on - strand, within Echvi_3699 at 4405.968 kb on + strand, within Echvi_3699 at 4406.076 kb on + strand, within Echvi_3699 at 4406.081 kb on + strand, within Echvi_3699 at 4406.081 kb on + strand, within Echvi_3699 at 4406.081 kb on + strand, within Echvi_3699 at 4406.081 kb on + strand, within Echvi_3699 at 4406.081 kb on + strand, within Echvi_3699 at 4406.082 kb on - strand, within Echvi_3699 at 4406.082 kb on - strand, within Echvi_3699 at 4406.082 kb on - strand, within Echvi_3699 at 4406.082 kb on - strand, within Echvi_3699 at 4406.082 kb on - strand, within Echvi_3699 at 4406.082 kb on - strand, within Echvi_3699 at 4406.098 kb on + strand, within Echvi_3699 at 4406.098 kb on + strand, within Echvi_3699 at 4406.099 kb on - strand, within Echvi_3699 at 4406.115 kb on + strand, within Echvi_3699 at 4406.115 kb on + strand, within Echvi_3699 at 4406.117 kb on + strand, within Echvi_3699 at 4406.117 kb on + strand, within Echvi_3699 at 4406.118 kb on - strand, within Echvi_3699 at 4406.123 kb on + strand, within Echvi_3699 at 4406.123 kb on + strand, within Echvi_3699 at 4406.124 kb on - strand, within Echvi_3699 at 4406.124 kb on - strand, within Echvi_3699 at 4406.124 kb on - strand, within Echvi_3699 at 4406.200 kb on + strand, within Echvi_3699 at 4406.200 kb on + strand, within Echvi_3699 at 4406.200 kb on + strand, within Echvi_3699 at 4406.201 kb on - strand, within Echvi_3699 at 4406.201 kb on - strand, within Echvi_3699 at 4406.201 kb on - strand, within Echvi_3699 at 4406.205 kb on + strand, within Echvi_3699 at 4406.206 kb on - strand, within Echvi_3699 at 4406.206 kb on - strand, within Echvi_3699 at 4406.206 kb on - strand, within Echvi_3699 at 4406.206 kb on - strand, within Echvi_3699 at 4406.207 kb on + strand, within Echvi_3699 at 4406.207 kb on + strand, within Echvi_3699 at 4406.208 kb on - strand, within Echvi_3699 at 4406.208 kb on - strand, within Echvi_3699 at 4406.208 kb on - strand, within Echvi_3699 at 4406.237 kb on + strand, within Echvi_3699 at 4406.238 kb on - strand, within Echvi_3699 at 4406.312 kb on + strand, within Echvi_3699 at 4406.312 kb on + strand, within Echvi_3699 at 4406.312 kb on + strand, within Echvi_3699 at 4406.312 kb on + strand, within Echvi_3699 at 4406.312 kb on + strand, within Echvi_3699 at 4406.313 kb on - strand, within Echvi_3699 at 4406.313 kb on - strand, within Echvi_3699 at 4406.313 kb on - strand, within Echvi_3699 at 4406.313 kb on - strand, within Echvi_3699 at 4406.313 kb on - strand, within Echvi_3699 at 4406.313 kb on - strand, within Echvi_3699 at 4406.354 kb on + strand, within Echvi_3699 at 4406.354 kb on + strand, within Echvi_3699 at 4406.355 kb on - strand, within Echvi_3699 at 4406.355 kb on - strand, within Echvi_3699 at 4406.355 kb on - strand, within Echvi_3699 at 4406.355 kb on - strand, within Echvi_3699 at 4406.496 kb on + strand at 4406.506 kb on + strand at 4406.507 kb on - strand at 4406.507 kb on - strand at 4406.507 kb on - strand at 4406.511 kb on + strand at 4406.511 kb on + strand at 4406.511 kb on + strand at 4406.512 kb on - strand at 4406.512 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 2 mM remove 4,403,770 - -2.0 4,403,877 + Echvi_3697 0.18 -0.6 4,403,879 + Echvi_3697 0.18 -1.6 4,403,880 - Echvi_3697 0.18 -1.3 4,403,883 + Echvi_3697 0.19 -0.3 4,403,884 - Echvi_3697 0.19 -2.2 4,403,920 + Echvi_3697 0.23 -1.3 4,403,931 + Echvi_3697 0.24 -2.2 4,403,931 + Echvi_3697 0.24 -0.6 4,404,000 + Echvi_3697 0.31 -0.6 4,404,000 + Echvi_3697 0.31 -1.3 4,404,001 - Echvi_3697 0.31 -1.9 4,404,001 - Echvi_3697 0.31 -0.3 4,404,003 - Echvi_3697 0.31 -0.3 4,404,065 + Echvi_3697 0.38 -0.6 4,404,104 + Echvi_3697 0.42 +1.7 4,404,112 + Echvi_3697 0.43 -0.6 4,404,113 - Echvi_3697 0.43 -2.1 4,404,264 - Echvi_3697 0.59 -2.8 4,404,325 + Echvi_3697 0.65 -1.7 4,404,325 + Echvi_3697 0.65 -1.3 4,404,355 - Echvi_3697 0.68 +0.7 4,404,441 + Echvi_3697 0.77 +0.7 4,404,442 - Echvi_3697 0.77 -1.1 4,404,455 - Echvi_3697 0.78 -1.3 4,404,492 + Echvi_3697 0.82 -2.3 4,404,492 + Echvi_3697 0.82 -0.3 4,404,585 + -2.0 4,404,586 - -2.7 4,404,646 + -2.1 4,404,647 - -2.3 4,404,649 + -1.7 4,404,649 + -2.6 4,404,777 + Echvi_3698 0.13 -0.6 4,404,777 + Echvi_3698 0.13 -2.7 4,404,777 + Echvi_3698 0.13 -2.4 4,404,778 - Echvi_3698 0.13 -1.3 4,404,778 - Echvi_3698 0.13 -0.6 4,404,778 - Echvi_3698 0.13 -1.1 4,404,778 - Echvi_3698 0.13 -1.3 4,405,048 + Echvi_3698 0.45 -2.3 4,405,059 + Echvi_3698 0.46 -1.3 4,405,136 + Echvi_3698 0.55 -0.6 4,405,146 - Echvi_3698 0.56 -0.9 4,405,177 + Echvi_3698 0.60 -1.4 4,405,280 + Echvi_3698 0.72 -0.4 4,405,348 + Echvi_3698 0.80 -3.1 4,405,399 + Echvi_3698 0.86 -2.3 4,405,428 + Echvi_3698 0.89 -1.7 4,405,473 - -1.4 4,405,582 - +0.9 4,405,582 - -0.6 4,405,582 - +1.2 4,405,592 + -1.3 4,405,660 + -2.2 4,405,660 + +2.7 4,405,739 + -0.4 4,405,739 + -0.9 4,405,739 + +0.5 4,405,739 + +0.3 4,405,739 + -0.5 4,405,739 + -0.9 4,405,739 + +1.3 4,405,739 + -3.1 4,405,739 + +0.8 4,405,739 + -1.1 4,405,739 + +1.0 4,405,740 - +0.4 4,405,740 - +0.5 4,405,740 - -0.4 4,405,740 - +0.4 4,405,829 + Echvi_3699 0.17 +1.3 4,405,830 - Echvi_3699 0.17 -0.9 4,405,830 - Echvi_3699 0.17 -0.5 4,405,833 + Echvi_3699 0.17 -1.3 4,405,833 + Echvi_3699 0.17 -0.5 4,405,833 + Echvi_3699 0.17 -0.1 4,405,833 + Echvi_3699 0.17 -0.4 4,405,833 + Echvi_3699 0.17 -1.0 4,405,860 + Echvi_3699 0.20 +1.7 4,405,860 + Echvi_3699 0.20 -0.2 4,405,860 + Echvi_3699 0.20 -0.6 4,405,861 - Echvi_3699 0.21 +0.6 4,405,884 - Echvi_3699 0.23 -0.9 4,405,931 - Echvi_3699 0.29 -0.1 4,405,968 + Echvi_3699 0.34 +0.4 4,406,076 + Echvi_3699 0.47 -0.9 4,406,081 + Echvi_3699 0.48 +0.7 4,406,081 + Echvi_3699 0.48 -1.3 4,406,081 + Echvi_3699 0.48 -0.3 4,406,081 + Echvi_3699 0.48 -2.0 4,406,081 + Echvi_3699 0.48 -1.2 4,406,082 - Echvi_3699 0.48 -0.5 4,406,082 - Echvi_3699 0.48 +0.3 4,406,082 - Echvi_3699 0.48 -0.7 4,406,082 - Echvi_3699 0.48 -0.9 4,406,082 - Echvi_3699 0.48 +1.7 4,406,082 - Echvi_3699 0.48 -1.6 4,406,098 + Echvi_3699 0.50 -0.7 4,406,098 + Echvi_3699 0.50 +0.5 4,406,099 - Echvi_3699 0.50 +1.1 4,406,115 + Echvi_3699 0.52 +0.1 4,406,115 + Echvi_3699 0.52 -0.3 4,406,117 + Echvi_3699 0.53 -1.0 4,406,117 + Echvi_3699 0.53 +1.1 4,406,118 - Echvi_3699 0.53 -0.8 4,406,123 + Echvi_3699 0.53 -0.2 4,406,123 + Echvi_3699 0.53 -0.9 4,406,124 - Echvi_3699 0.53 -0.7 4,406,124 - Echvi_3699 0.53 -0.7 4,406,124 - Echvi_3699 0.53 -0.3 4,406,200 + Echvi_3699 0.63 +0.5 4,406,200 + Echvi_3699 0.63 -0.2 4,406,200 + Echvi_3699 0.63 +0.3 4,406,201 - Echvi_3699 0.63 +0.6 4,406,201 - Echvi_3699 0.63 -1.4 4,406,201 - Echvi_3699 0.63 +0.1 4,406,205 + Echvi_3699 0.64 +0.5 4,406,206 - Echvi_3699 0.64 -0.5 4,406,206 - Echvi_3699 0.64 -0.7 4,406,206 - Echvi_3699 0.64 -0.9 4,406,206 - Echvi_3699 0.64 -0.8 4,406,207 + Echvi_3699 0.64 -0.0 4,406,207 + Echvi_3699 0.64 +2.7 4,406,208 - Echvi_3699 0.64 +2.5 4,406,208 - Echvi_3699 0.64 -0.2 4,406,208 - Echvi_3699 0.64 -0.0 4,406,237 + Echvi_3699 0.68 -0.1 4,406,238 - Echvi_3699 0.68 -0.2 4,406,312 + Echvi_3699 0.77 -2.0 4,406,312 + Echvi_3699 0.77 -0.2 4,406,312 + Echvi_3699 0.77 -1.0 4,406,312 + Echvi_3699 0.77 +0.7 4,406,312 + Echvi_3699 0.77 +0.1 4,406,313 - Echvi_3699 0.77 -0.2 4,406,313 - Echvi_3699 0.77 -2.8 4,406,313 - Echvi_3699 0.77 -0.7 4,406,313 - Echvi_3699 0.77 -0.3 4,406,313 - Echvi_3699 0.77 +0.1 4,406,313 - Echvi_3699 0.77 -1.7 4,406,354 + Echvi_3699 0.82 +0.7 4,406,354 + Echvi_3699 0.82 -1.3 4,406,355 - Echvi_3699 0.82 +0.7 4,406,355 - Echvi_3699 0.82 +0.3 4,406,355 - Echvi_3699 0.82 -1.4 4,406,355 - Echvi_3699 0.82 -0.3 4,406,496 + -2.5 4,406,506 + -1.0 4,406,507 - +0.3 4,406,507 - +0.8 4,406,507 - +0.2 4,406,511 + +0.6 4,406,511 + -0.4 4,406,511 + +0.5 4,406,512 - +0.3 4,406,512 - -0.4
Or see this region's nucleotide sequence