Experiment: m.b. Aluminum chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3321 and Echvi_3322 overlap by 4 nucleotides Echvi_3322 and Echvi_3323 are separated by 367 nucleotides
Echvi_3321: Echvi_3321 - Beta-galactosidase/beta-glucuronidase, at 3,924,198 to 3,926,660
_3321
Echvi_3322: Echvi_3322 - hypothetical protein, at 3,926,657 to 3,927,121
_3322
Echvi_3323: Echvi_3323 - Penicillin V acylase and related amidases, at 3,927,489 to 3,928,520
_3323
Position (kb)
3926
3927
3928 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3925.669 kb on - strand, within Echvi_3321 at 3925.683 kb on + strand, within Echvi_3321 at 3925.683 kb on + strand, within Echvi_3321 at 3925.696 kb on - strand, within Echvi_3321 at 3925.799 kb on - strand, within Echvi_3321 at 3925.836 kb on + strand, within Echvi_3321 at 3925.836 kb on + strand, within Echvi_3321 at 3925.836 kb on + strand, within Echvi_3321 at 3925.837 kb on - strand, within Echvi_3321 at 3925.837 kb on - strand, within Echvi_3321 at 3925.837 kb on - strand, within Echvi_3321 at 3925.841 kb on + strand, within Echvi_3321 at 3925.842 kb on - strand, within Echvi_3321 at 3925.951 kb on - strand, within Echvi_3321 at 3925.956 kb on - strand, within Echvi_3321 at 3926.029 kb on - strand, within Echvi_3321 at 3926.034 kb on + strand, within Echvi_3321 at 3926.034 kb on + strand, within Echvi_3321 at 3926.036 kb on + strand, within Echvi_3321 at 3926.036 kb on + strand, within Echvi_3321 at 3926.037 kb on - strand, within Echvi_3321 at 3926.037 kb on - strand, within Echvi_3321 at 3926.044 kb on + strand, within Echvi_3321 at 3926.072 kb on + strand, within Echvi_3321 at 3926.072 kb on + strand, within Echvi_3321 at 3926.072 kb on + strand, within Echvi_3321 at 3926.072 kb on + strand, within Echvi_3321 at 3926.073 kb on - strand, within Echvi_3321 at 3926.073 kb on - strand, within Echvi_3321 at 3926.077 kb on + strand, within Echvi_3321 at 3926.078 kb on - strand, within Echvi_3321 at 3926.220 kb on + strand, within Echvi_3321 at 3926.221 kb on - strand, within Echvi_3321 at 3926.248 kb on - strand, within Echvi_3321 at 3926.248 kb on - strand, within Echvi_3321 at 3926.248 kb on - strand, within Echvi_3321 at 3926.282 kb on + strand at 3926.283 kb on - strand, within Echvi_3321 at 3926.397 kb on - strand, within Echvi_3321 at 3926.432 kb on - strand at 3926.486 kb on + strand at 3926.605 kb on + strand at 3926.606 kb on - strand at 3926.606 kb on - strand at 3926.671 kb on + strand at 3926.671 kb on + strand at 3926.672 kb on - strand at 3926.672 kb on - strand at 3926.714 kb on + strand, within Echvi_3322 at 3926.714 kb on + strand, within Echvi_3322 at 3926.721 kb on + strand, within Echvi_3322 at 3926.725 kb on + strand, within Echvi_3322 at 3926.735 kb on + strand, within Echvi_3322 at 3926.735 kb on + strand, within Echvi_3322 at 3926.736 kb on - strand, within Echvi_3322 at 3926.736 kb on - strand, within Echvi_3322 at 3926.747 kb on + strand, within Echvi_3322 at 3926.750 kb on + strand, within Echvi_3322 at 3926.750 kb on + strand, within Echvi_3322 at 3926.768 kb on + strand, within Echvi_3322 at 3926.768 kb on + strand, within Echvi_3322 at 3926.768 kb on + strand, within Echvi_3322 at 3926.769 kb on - strand, within Echvi_3322 at 3926.769 kb on - strand, within Echvi_3322 at 3926.769 kb on - strand, within Echvi_3322 at 3926.769 kb on - strand, within Echvi_3322 at 3926.830 kb on - strand, within Echvi_3322 at 3926.830 kb on - strand, within Echvi_3322 at 3926.861 kb on + strand, within Echvi_3322 at 3926.862 kb on - strand, within Echvi_3322 at 3926.903 kb on + strand, within Echvi_3322 at 3926.904 kb on - strand, within Echvi_3322 at 3926.973 kb on - strand, within Echvi_3322 at 3927.012 kb on + strand, within Echvi_3322 at 3927.012 kb on + strand, within Echvi_3322 at 3927.021 kb on + strand, within Echvi_3322 at 3927.099 kb on - strand at 3927.101 kb on - strand at 3927.101 kb on - strand at 3927.111 kb on - strand at 3927.113 kb on + strand at 3927.114 kb on - strand at 3927.114 kb on - strand at 3927.145 kb on - strand at 3927.148 kb on + strand at 3927.148 kb on + strand at 3927.149 kb on - strand at 3927.150 kb on + strand at 3927.151 kb on - strand at 3927.152 kb on + strand at 3927.152 kb on + strand at 3927.200 kb on + strand at 3927.211 kb on + strand at 3927.211 kb on + strand at 3927.211 kb on + strand at 3927.212 kb on - strand at 3927.252 kb on + strand at 3927.322 kb on - strand at 3927.325 kb on + strand at 3927.350 kb on + strand at 3927.392 kb on - strand at 3927.396 kb on - strand at 3927.396 kb on - strand at 3927.444 kb on + strand at 3927.451 kb on + strand at 3927.472 kb on + strand at 3927.485 kb on + strand at 3927.485 kb on + strand at 3927.485 kb on + strand at 3927.539 kb on + strand at 3927.539 kb on + strand at 3927.568 kb on - strand at 3927.568 kb on - strand at 3927.637 kb on + strand, within Echvi_3323 at 3927.638 kb on - strand, within Echvi_3323 at 3927.638 kb on - strand, within Echvi_3323 at 3927.638 kb on - strand, within Echvi_3323 at 3927.709 kb on - strand, within Echvi_3323 at 3927.709 kb on - strand, within Echvi_3323 at 3927.732 kb on + strand, within Echvi_3323 at 3927.733 kb on - strand, within Echvi_3323 at 3927.862 kb on - strand, within Echvi_3323 at 3927.862 kb on - strand, within Echvi_3323 at 3927.862 kb on - strand, within Echvi_3323 at 3927.863 kb on + strand, within Echvi_3323 at 3927.863 kb on + strand, within Echvi_3323 at 3927.863 kb on + strand, within Echvi_3323 at 3927.863 kb on + strand, within Echvi_3323 at 3927.863 kb on + strand, within Echvi_3323 at 3927.863 kb on + strand, within Echvi_3323 at 3927.864 kb on - strand, within Echvi_3323 at 3927.864 kb on - strand, within Echvi_3323 at 3927.864 kb on - strand, within Echvi_3323 at 3927.864 kb on - strand, within Echvi_3323 at 3927.864 kb on - strand, within Echvi_3323 at 3927.865 kb on + strand, within Echvi_3323 at 3927.865 kb on + strand, within Echvi_3323 at 3927.866 kb on - strand, within Echvi_3323 at 3927.898 kb on + strand, within Echvi_3323 at 3927.938 kb on + strand, within Echvi_3323 at 3927.942 kb on - strand, within Echvi_3323 at 3928.001 kb on + strand, within Echvi_3323 at 3928.017 kb on + strand, within Echvi_3323 at 3928.056 kb on + strand, within Echvi_3323 at 3928.083 kb on + strand, within Echvi_3323
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 2 mM remove 3,925,669 - Echvi_3321 0.60 -0.1 3,925,683 + Echvi_3321 0.60 +2.4 3,925,683 + Echvi_3321 0.60 +0.8 3,925,696 - Echvi_3321 0.61 -0.9 3,925,799 - Echvi_3321 0.65 +0.7 3,925,836 + Echvi_3321 0.67 -0.8 3,925,836 + Echvi_3321 0.67 +0.9 3,925,836 + Echvi_3321 0.67 -0.0 3,925,837 - Echvi_3321 0.67 +2.7 3,925,837 - Echvi_3321 0.67 +1.0 3,925,837 - Echvi_3321 0.67 -0.2 3,925,841 + Echvi_3321 0.67 +2.6 3,925,842 - Echvi_3321 0.67 -0.3 3,925,951 - Echvi_3321 0.71 +1.1 3,925,956 - Echvi_3321 0.71 -1.9 3,926,029 - Echvi_3321 0.74 -0.1 3,926,034 + Echvi_3321 0.75 -2.0 3,926,034 + Echvi_3321 0.75 +0.7 3,926,036 + Echvi_3321 0.75 +0.4 3,926,036 + Echvi_3321 0.75 +0.7 3,926,037 - Echvi_3321 0.75 -0.4 3,926,037 - Echvi_3321 0.75 -2.8 3,926,044 + Echvi_3321 0.75 -0.5 3,926,072 + Echvi_3321 0.76 -0.6 3,926,072 + Echvi_3321 0.76 +1.0 3,926,072 + Echvi_3321 0.76 -0.7 3,926,072 + Echvi_3321 0.76 +1.0 3,926,073 - Echvi_3321 0.76 +0.1 3,926,073 - Echvi_3321 0.76 +0.9 3,926,077 + Echvi_3321 0.76 -0.2 3,926,078 - Echvi_3321 0.76 -2.0 3,926,220 + Echvi_3321 0.82 -0.3 3,926,221 - Echvi_3321 0.82 -1.1 3,926,248 - Echvi_3321 0.83 -2.0 3,926,248 - Echvi_3321 0.83 -0.2 3,926,248 - Echvi_3321 0.83 +0.1 3,926,282 + +0.1 3,926,283 - Echvi_3321 0.85 -0.9 3,926,397 - Echvi_3321 0.89 -0.3 3,926,432 - -0.2 3,926,486 + +1.4 3,926,605 + +0.7 3,926,606 - -2.0 3,926,606 - -1.4 3,926,671 + +0.4 3,926,671 + +0.3 3,926,672 - -0.5 3,926,672 - -0.6 3,926,714 + Echvi_3322 0.12 +0.2 3,926,714 + Echvi_3322 0.12 +1.0 3,926,721 + Echvi_3322 0.14 -2.1 3,926,725 + Echvi_3322 0.15 -0.4 3,926,735 + Echvi_3322 0.17 +1.1 3,926,735 + Echvi_3322 0.17 +0.1 3,926,736 - Echvi_3322 0.17 +1.1 3,926,736 - Echvi_3322 0.17 +1.4 3,926,747 + Echvi_3322 0.19 +1.2 3,926,750 + Echvi_3322 0.20 -1.7 3,926,750 + Echvi_3322 0.20 -1.4 3,926,768 + Echvi_3322 0.24 +0.1 3,926,768 + Echvi_3322 0.24 +0.2 3,926,768 + Echvi_3322 0.24 -0.3 3,926,769 - Echvi_3322 0.24 +0.5 3,926,769 - Echvi_3322 0.24 +0.3 3,926,769 - Echvi_3322 0.24 -0.3 3,926,769 - Echvi_3322 0.24 +0.1 3,926,830 - Echvi_3322 0.37 -1.7 3,926,830 - Echvi_3322 0.37 -1.2 3,926,861 + Echvi_3322 0.44 -2.2 3,926,862 - Echvi_3322 0.44 -0.9 3,926,903 + Echvi_3322 0.53 +0.7 3,926,904 - Echvi_3322 0.53 -0.8 3,926,973 - Echvi_3322 0.68 +1.0 3,927,012 + Echvi_3322 0.76 -0.3 3,927,012 + Echvi_3322 0.76 +1.5 3,927,021 + Echvi_3322 0.78 +0.8 3,927,099 - +0.3 3,927,101 - +1.7 3,927,101 - +1.7 3,927,111 - +0.5 3,927,113 + +1.2 3,927,114 - -0.5 3,927,114 - +0.6 3,927,145 - +1.0 3,927,148 + +0.6 3,927,148 + -0.1 3,927,149 - -2.0 3,927,150 + +0.2 3,927,151 - -1.4 3,927,152 + +0.5 3,927,152 + -0.1 3,927,200 + +0.1 3,927,211 + +0.5 3,927,211 + -2.0 3,927,211 + -0.9 3,927,212 - +2.1 3,927,252 + +0.1 3,927,322 - +0.7 3,927,325 + -1.4 3,927,350 + +0.9 3,927,392 - -1.1 3,927,396 - -0.1 3,927,396 - +0.6 3,927,444 + +0.0 3,927,451 + +0.4 3,927,472 + -0.2 3,927,485 + +0.0 3,927,485 + -0.9 3,927,485 + -0.3 3,927,539 + -0.7 3,927,539 + +0.6 3,927,568 - +0.5 3,927,568 - +0.7 3,927,637 + Echvi_3323 0.14 -0.6 3,927,638 - Echvi_3323 0.14 -2.0 3,927,638 - Echvi_3323 0.14 -2.4 3,927,638 - Echvi_3323 0.14 +1.0 3,927,709 - Echvi_3323 0.21 +3.0 3,927,709 - Echvi_3323 0.21 +0.9 3,927,732 + Echvi_3323 0.24 +0.8 3,927,733 - Echvi_3323 0.24 +0.3 3,927,862 - Echvi_3323 0.36 -2.2 3,927,862 - Echvi_3323 0.36 -0.3 3,927,862 - Echvi_3323 0.36 -0.5 3,927,863 + Echvi_3323 0.36 -0.3 3,927,863 + Echvi_3323 0.36 -0.0 3,927,863 + Echvi_3323 0.36 -0.1 3,927,863 + Echvi_3323 0.36 -1.0 3,927,863 + Echvi_3323 0.36 +0.1 3,927,863 + Echvi_3323 0.36 -0.3 3,927,864 - Echvi_3323 0.36 +0.1 3,927,864 - Echvi_3323 0.36 +1.0 3,927,864 - Echvi_3323 0.36 -0.3 3,927,864 - Echvi_3323 0.36 -1.1 3,927,864 - Echvi_3323 0.36 -1.0 3,927,865 + Echvi_3323 0.36 -2.1 3,927,865 + Echvi_3323 0.36 -0.3 3,927,866 - Echvi_3323 0.37 +0.7 3,927,898 + Echvi_3323 0.40 +2.1 3,927,938 + Echvi_3323 0.44 -1.1 3,927,942 - Echvi_3323 0.44 +0.4 3,928,001 + Echvi_3323 0.50 +0.1 3,928,017 + Echvi_3323 0.51 -1.3 3,928,056 + Echvi_3323 0.55 -1.1 3,928,083 + Echvi_3323 0.58 -0.6
Or see this region's nucleotide sequence