Experiment: m.b. Aluminum chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2954 and Echvi_2955 are separated by 63 nucleotides Echvi_2955 and Echvi_2956 are separated by 160 nucleotides Echvi_2956 and Echvi_2957 are separated by 34 nucleotides
Echvi_2954: Echvi_2954 - Nucleoside permease, at 3,531,092 to 3,532,378
_2954
Echvi_2955: Echvi_2955 - Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family, at 3,532,442 to 3,532,879
_2955
Echvi_2956: Echvi_2956 - hypothetical protein, at 3,533,040 to 3,533,309
_2956
Echvi_2957: Echvi_2957 - phosphoenolpyruvate carboxykinase (ATP), at 3,533,344 to 3,534,942
_2957
Position (kb)
3533
3534 Strain fitness (log2 ratio)
-2
-1
0
1 at 3532.082 kb on - strand, within Echvi_2954 at 3532.177 kb on - strand, within Echvi_2954 at 3532.340 kb on - strand at 3532.376 kb on + strand at 3532.399 kb on - strand at 3532.399 kb on - strand at 3532.436 kb on + strand at 3532.443 kb on + strand at 3532.443 kb on + strand at 3532.443 kb on + strand at 3532.443 kb on + strand at 3532.444 kb on - strand at 3532.496 kb on + strand, within Echvi_2955 at 3532.500 kb on - strand, within Echvi_2955 at 3532.625 kb on + strand, within Echvi_2955 at 3532.678 kb on + strand, within Echvi_2955 at 3532.678 kb on + strand, within Echvi_2955 at 3532.679 kb on - strand, within Echvi_2955 at 3532.757 kb on - strand, within Echvi_2955 at 3532.768 kb on - strand, within Echvi_2955 at 3532.768 kb on - strand, within Echvi_2955 at 3532.790 kb on + strand, within Echvi_2955 at 3533.013 kb on + strand at 3533.031 kb on + strand at 3533.035 kb on + strand at 3533.045 kb on + strand at 3533.046 kb on - strand at 3533.122 kb on + strand, within Echvi_2956 at 3533.122 kb on + strand, within Echvi_2956 at 3533.122 kb on + strand, within Echvi_2956 at 3533.199 kb on + strand, within Echvi_2956 at 3533.199 kb on + strand, within Echvi_2956 at 3533.199 kb on + strand, within Echvi_2956 at 3533.200 kb on - strand, within Echvi_2956 at 3533.200 kb on - strand, within Echvi_2956 at 3533.225 kb on + strand, within Echvi_2956 at 3533.258 kb on - strand, within Echvi_2956 at 3533.345 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 2 mM remove 3,532,082 - Echvi_2954 0.77 -1.4 3,532,177 - Echvi_2954 0.84 -0.6 3,532,340 - -0.5 3,532,376 + -0.3 3,532,399 - +0.3 3,532,399 - -0.8 3,532,436 + -0.3 3,532,443 + -1.9 3,532,443 + -0.3 3,532,443 + -0.3 3,532,443 + +1.4 3,532,444 - +1.2 3,532,496 + Echvi_2955 0.12 -1.6 3,532,500 - Echvi_2955 0.13 -1.3 3,532,625 + Echvi_2955 0.42 +0.5 3,532,678 + Echvi_2955 0.54 -0.0 3,532,678 + Echvi_2955 0.54 -1.1 3,532,679 - Echvi_2955 0.54 +1.5 3,532,757 - Echvi_2955 0.72 -0.4 3,532,768 - Echvi_2955 0.74 +0.7 3,532,768 - Echvi_2955 0.74 +0.5 3,532,790 + Echvi_2955 0.79 +0.4 3,533,013 + -1.1 3,533,031 + -0.4 3,533,035 + -0.2 3,533,045 + +0.2 3,533,046 - -0.3 3,533,122 + Echvi_2956 0.30 +0.3 3,533,122 + Echvi_2956 0.30 -0.5 3,533,122 + Echvi_2956 0.30 +0.6 3,533,199 + Echvi_2956 0.59 +1.2 3,533,199 + Echvi_2956 0.59 -0.8 3,533,199 + Echvi_2956 0.59 -0.3 3,533,200 - Echvi_2956 0.59 -1.1 3,533,200 - Echvi_2956 0.59 +0.2 3,533,225 + Echvi_2956 0.69 +1.6 3,533,258 - Echvi_2956 0.81 +0.5 3,533,345 + -1.2
Or see this region's nucleotide sequence