Experiment: m.b. Aluminum chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2859 and Echvi_2860 are separated by 303 nucleotides Echvi_2860 and Echvi_2861 are separated by 41 nucleotides Echvi_2861 and Echvi_2862 are separated by 26 nucleotides
Echvi_2859: Echvi_2859 - hypothetical protein, at 3,429,665 to 3,430,330
_2859
Echvi_2860: Echvi_2860 - sugar-phosphate isomerases, RpiB/LacA/LacB family, at 3,430,634 to 3,431,089
_2860
Echvi_2861: Echvi_2861 - 6-phosphogluconate dehydrogenase, decarboxylating, at 3,431,131 to 3,432,528
_2861
Echvi_2862: Echvi_2862 - glucose-6-phosphate 1-dehydrogenase, at 3,432,555 to 3,434,072
_2862
Position (kb)
3431
3432
3433 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3430.181 kb on - strand, within Echvi_2859 at 3430.393 kb on + strand at 3430.410 kb on + strand at 3430.436 kb on + strand at 3430.641 kb on + strand at 3430.695 kb on - strand, within Echvi_2860 at 3430.760 kb on + strand, within Echvi_2860 at 3430.773 kb on + strand, within Echvi_2860 at 3430.827 kb on + strand, within Echvi_2860 at 3430.905 kb on - strand, within Echvi_2860 at 3430.936 kb on + strand, within Echvi_2860 at 3431.019 kb on - strand, within Echvi_2860 at 3431.087 kb on + strand at 3431.109 kb on + strand at 3431.109 kb on + strand at 3431.123 kb on + strand at 3431.123 kb on + strand at 3431.127 kb on + strand at 3431.127 kb on + strand at 3431.128 kb on - strand at 3431.232 kb on - strand at 3431.419 kb on - strand, within Echvi_2861 at 3431.419 kb on - strand, within Echvi_2861 at 3431.578 kb on + strand, within Echvi_2861 at 3431.688 kb on + strand, within Echvi_2861 at 3431.695 kb on - strand, within Echvi_2861 at 3431.700 kb on - strand, within Echvi_2861 at 3431.732 kb on - strand, within Echvi_2861 at 3431.736 kb on + strand at 3431.803 kb on - strand, within Echvi_2861 at 3432.101 kb on - strand, within Echvi_2861 at 3432.121 kb on + strand, within Echvi_2861 at 3432.122 kb on - strand, within Echvi_2861 at 3432.122 kb on - strand, within Echvi_2861 at 3432.133 kb on - strand, within Echvi_2861 at 3432.138 kb on - strand, within Echvi_2861 at 3432.237 kb on - strand, within Echvi_2861 at 3432.594 kb on - strand at 3432.658 kb on - strand at 3432.660 kb on - strand at 3433.077 kb on - strand, within Echvi_2862 at 3433.206 kb on + strand, within Echvi_2862 at 3433.216 kb on - strand, within Echvi_2862 at 3433.220 kb on - strand, within Echvi_2862 at 3433.269 kb on + strand, within Echvi_2862 at 3433.471 kb on + strand, within Echvi_2862
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 2 mM remove 3,430,181 - Echvi_2859 0.77 -0.7 3,430,393 + +0.2 3,430,410 + -1.7 3,430,436 + +2.0 3,430,641 + -2.4 3,430,695 - Echvi_2860 0.13 +0.3 3,430,760 + Echvi_2860 0.28 -1.3 3,430,773 + Echvi_2860 0.30 +0.2 3,430,827 + Echvi_2860 0.42 +1.7 3,430,905 - Echvi_2860 0.59 -0.8 3,430,936 + Echvi_2860 0.66 -1.5 3,431,019 - Echvi_2860 0.84 -1.1 3,431,087 + +0.7 3,431,109 + +0.4 3,431,109 + +0.7 3,431,123 + -2.0 3,431,123 + -1.3 3,431,127 + +0.4 3,431,127 + +0.3 3,431,128 - -1.8 3,431,232 - -1.1 3,431,419 - Echvi_2861 0.21 +0.7 3,431,419 - Echvi_2861 0.21 -1.3 3,431,578 + Echvi_2861 0.32 -0.8 3,431,688 + Echvi_2861 0.40 -3.2 3,431,695 - Echvi_2861 0.40 +0.7 3,431,700 - Echvi_2861 0.41 -2.3 3,431,732 - Echvi_2861 0.43 -2.4 3,431,736 + +1.7 3,431,803 - Echvi_2861 0.48 -0.6 3,432,101 - Echvi_2861 0.69 -0.2 3,432,121 + Echvi_2861 0.71 +0.7 3,432,122 - Echvi_2861 0.71 -1.3 3,432,122 - Echvi_2861 0.71 -0.3 3,432,133 - Echvi_2861 0.72 -0.8 3,432,138 - Echvi_2861 0.72 +1.7 3,432,237 - Echvi_2861 0.79 -0.7 3,432,594 - +0.2 3,432,658 - -1.5 3,432,660 - +0.7 3,433,077 - Echvi_2862 0.34 -0.3 3,433,206 + Echvi_2862 0.43 -0.8 3,433,216 - Echvi_2862 0.44 -0.4 3,433,220 - Echvi_2862 0.44 -2.6 3,433,269 + Echvi_2862 0.47 +0.2 3,433,471 + Echvi_2862 0.60 -0.6
Or see this region's nucleotide sequence