Experiment: m.b. Aluminum chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2080 and Echvi_2081 are separated by 5 nucleotides Echvi_2081 and Echvi_2082 are separated by 6 nucleotides Echvi_2082 and Echvi_2083 overlap by 4 nucleotides
Echvi_2080: Echvi_2080 - Cystathionine beta-lyases/cystathionine gamma-synthases, at 2,453,394 to 2,454,539
_2080
Echvi_2081: Echvi_2081 - hypothetical protein, at 2,454,545 to 2,455,384
_2081
Echvi_2082: Echvi_2082 - Smr domain., at 2,455,391 to 2,456,350
_2082
Echvi_2083: Echvi_2083 - Deoxyribodipyrimidine photolyase, at 2,456,347 to 2,457,642
_2083
Position (kb)
2454
2455
2456 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2453.686 kb on - strand, within Echvi_2080 at 2453.686 kb on - strand, within Echvi_2080 at 2453.686 kb on - strand, within Echvi_2080 at 2453.708 kb on + strand, within Echvi_2080 at 2453.906 kb on + strand, within Echvi_2080 at 2453.907 kb on - strand, within Echvi_2080 at 2453.922 kb on + strand, within Echvi_2080 at 2453.979 kb on + strand, within Echvi_2080 at 2454.133 kb on + strand, within Echvi_2080 at 2454.134 kb on - strand, within Echvi_2080 at 2454.134 kb on - strand, within Echvi_2080 at 2454.210 kb on + strand, within Echvi_2080 at 2454.210 kb on + strand, within Echvi_2080 at 2454.211 kb on - strand, within Echvi_2080 at 2454.377 kb on - strand, within Echvi_2080 at 2454.425 kb on + strand at 2454.538 kb on - strand at 2454.540 kb on + strand at 2454.541 kb on - strand at 2454.547 kb on - strand at 2454.685 kb on + strand, within Echvi_2081 at 2454.685 kb on + strand, within Echvi_2081 at 2454.686 kb on - strand, within Echvi_2081 at 2454.686 kb on - strand, within Echvi_2081 at 2454.750 kb on + strand, within Echvi_2081 at 2454.775 kb on + strand, within Echvi_2081 at 2454.827 kb on + strand, within Echvi_2081 at 2454.827 kb on + strand, within Echvi_2081 at 2454.828 kb on - strand, within Echvi_2081 at 2454.837 kb on + strand, within Echvi_2081 at 2454.841 kb on + strand, within Echvi_2081 at 2454.842 kb on - strand, within Echvi_2081 at 2454.842 kb on - strand at 2454.842 kb on - strand, within Echvi_2081 at 2454.948 kb on - strand, within Echvi_2081 at 2454.948 kb on - strand, within Echvi_2081 at 2454.954 kb on - strand, within Echvi_2081 at 2454.954 kb on - strand, within Echvi_2081 at 2454.954 kb on - strand, within Echvi_2081 at 2454.959 kb on - strand, within Echvi_2081 at 2455.023 kb on + strand, within Echvi_2081 at 2455.122 kb on - strand, within Echvi_2081 at 2455.174 kb on - strand, within Echvi_2081 at 2455.239 kb on + strand, within Echvi_2081 at 2455.240 kb on - strand, within Echvi_2081 at 2455.240 kb on - strand, within Echvi_2081 at 2455.240 kb on - strand at 2455.335 kb on + strand at 2455.392 kb on + strand at 2455.393 kb on - strand at 2455.393 kb on - strand at 2455.393 kb on - strand at 2455.398 kb on - strand at 2455.399 kb on + strand at 2455.403 kb on + strand at 2455.403 kb on + strand at 2455.404 kb on - strand at 2455.404 kb on - strand at 2455.404 kb on - strand at 2455.404 kb on - strand at 2455.404 kb on - strand at 2455.404 kb on - strand at 2455.456 kb on + strand at 2455.565 kb on + strand, within Echvi_2082 at 2455.613 kb on - strand, within Echvi_2082 at 2455.613 kb on - strand, within Echvi_2082 at 2455.808 kb on - strand, within Echvi_2082 at 2456.053 kb on + strand, within Echvi_2082 at 2456.054 kb on - strand, within Echvi_2082 at 2456.097 kb on + strand, within Echvi_2082 at 2456.097 kb on + strand, within Echvi_2082 at 2456.097 kb on + strand, within Echvi_2082 at 2456.098 kb on - strand, within Echvi_2082 at 2456.098 kb on - strand, within Echvi_2082 at 2456.098 kb on - strand, within Echvi_2082 at 2456.190 kb on + strand, within Echvi_2082 at 2456.191 kb on - strand, within Echvi_2082 at 2456.191 kb on - strand, within Echvi_2082 at 2456.336 kb on - strand at 2456.367 kb on + strand at 2456.370 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 2 mM remove 2,453,686 - Echvi_2080 0.25 -0.2 2,453,686 - Echvi_2080 0.25 -0.5 2,453,686 - Echvi_2080 0.25 -0.9 2,453,708 + Echvi_2080 0.27 +1.3 2,453,906 + Echvi_2080 0.45 +0.1 2,453,907 - Echvi_2080 0.45 -3.0 2,453,922 + Echvi_2080 0.46 +1.3 2,453,979 + Echvi_2080 0.51 +0.2 2,454,133 + Echvi_2080 0.64 -0.0 2,454,134 - Echvi_2080 0.65 +0.1 2,454,134 - Echvi_2080 0.65 +0.6 2,454,210 + Echvi_2080 0.71 -1.8 2,454,210 + Echvi_2080 0.71 +0.2 2,454,211 - Echvi_2080 0.71 +0.5 2,454,377 - Echvi_2080 0.86 +1.6 2,454,425 + -1.4 2,454,538 - -0.9 2,454,540 + -0.2 2,454,541 - -1.7 2,454,547 - -3.0 2,454,685 + Echvi_2081 0.17 -1.8 2,454,685 + Echvi_2081 0.17 +0.0 2,454,686 - Echvi_2081 0.17 -1.1 2,454,686 - Echvi_2081 0.17 -1.2 2,454,750 + Echvi_2081 0.24 -0.1 2,454,775 + Echvi_2081 0.27 +0.1 2,454,827 + Echvi_2081 0.34 -0.8 2,454,827 + Echvi_2081 0.34 -1.7 2,454,828 - Echvi_2081 0.34 +0.4 2,454,837 + Echvi_2081 0.35 -1.6 2,454,841 + Echvi_2081 0.35 +0.1 2,454,842 - Echvi_2081 0.35 -0.1 2,454,842 - +1.9 2,454,842 - Echvi_2081 0.35 -1.9 2,454,948 - Echvi_2081 0.48 +1.0 2,454,948 - Echvi_2081 0.48 +1.2 2,454,954 - Echvi_2081 0.49 +0.6 2,454,954 - Echvi_2081 0.49 -0.1 2,454,954 - Echvi_2081 0.49 -0.4 2,454,959 - Echvi_2081 0.49 +1.9 2,455,023 + Echvi_2081 0.57 +0.2 2,455,122 - Echvi_2081 0.69 -0.1 2,455,174 - Echvi_2081 0.75 +0.6 2,455,239 + Echvi_2081 0.83 -1.0 2,455,240 - Echvi_2081 0.83 -2.0 2,455,240 - Echvi_2081 0.83 -0.7 2,455,240 - +1.9 2,455,335 + +1.6 2,455,392 + +0.9 2,455,393 - -0.7 2,455,393 - +0.9 2,455,393 - +0.0 2,455,398 - +0.9 2,455,399 + -0.2 2,455,403 + +1.0 2,455,403 + +0.3 2,455,404 - -1.1 2,455,404 - -0.8 2,455,404 - -2.2 2,455,404 - +1.2 2,455,404 - -0.2 2,455,404 - -0.1 2,455,456 + +0.9 2,455,565 + Echvi_2082 0.18 -0.6 2,455,613 - Echvi_2082 0.23 +0.7 2,455,613 - Echvi_2082 0.23 -0.1 2,455,808 - Echvi_2082 0.43 +1.4 2,456,053 + Echvi_2082 0.69 +0.6 2,456,054 - Echvi_2082 0.69 +1.5 2,456,097 + Echvi_2082 0.74 +1.2 2,456,097 + Echvi_2082 0.74 -0.4 2,456,097 + Echvi_2082 0.74 -0.1 2,456,098 - Echvi_2082 0.74 +0.4 2,456,098 - Echvi_2082 0.74 -0.6 2,456,098 - Echvi_2082 0.74 -0.7 2,456,190 + Echvi_2082 0.83 +0.0 2,456,191 - Echvi_2082 0.83 -1.3 2,456,191 - Echvi_2082 0.83 +1.3 2,456,336 - -0.1 2,456,367 + +1.6 2,456,370 - -0.1
Or see this region's nucleotide sequence