Experiment: m.b. Aluminum chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1334 and Echvi_1335 are separated by 73 nucleotides Echvi_1335 and Echvi_1336 are separated by 175 nucleotides Echvi_1336 and Echvi_1337 are separated by 63 nucleotides
Echvi_1334: Echvi_1334 - Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II, at 1,544,800 to 1,546,320
_1334
Echvi_1335: Echvi_1335 - Universal stress protein UspA and related nucleotide-binding proteins, at 1,546,394 to 1,547,308
_1335
Echvi_1336: Echvi_1336 - 2'-5' RNA ligase, at 1,547,484 to 1,548,110
_1336
Echvi_1337: Echvi_1337 - ribosomal protein L19, bacterial type, at 1,548,174 to 1,548,539
_1337
Position (kb)
1546
1547
1548 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 1545.537 kb on - strand, within Echvi_1334 at 1545.537 kb on - strand, within Echvi_1334 at 1545.620 kb on - strand, within Echvi_1334 at 1545.620 kb on - strand, within Echvi_1334 at 1545.631 kb on + strand, within Echvi_1334 at 1545.631 kb on + strand, within Echvi_1334 at 1545.632 kb on - strand, within Echvi_1334 at 1545.632 kb on - strand, within Echvi_1334 at 1545.634 kb on - strand, within Echvi_1334 at 1545.712 kb on + strand, within Echvi_1334 at 1545.713 kb on - strand, within Echvi_1334 at 1545.814 kb on - strand, within Echvi_1334 at 1545.835 kb on + strand, within Echvi_1334 at 1545.837 kb on + strand, within Echvi_1334 at 1545.837 kb on + strand, within Echvi_1334 at 1545.838 kb on - strand, within Echvi_1334 at 1545.838 kb on - strand, within Echvi_1334 at 1545.838 kb on - strand, within Echvi_1334 at 1546.022 kb on - strand, within Echvi_1334 at 1546.144 kb on + strand, within Echvi_1334 at 1546.144 kb on + strand, within Echvi_1334 at 1546.144 kb on + strand, within Echvi_1334 at 1546.145 kb on - strand, within Echvi_1334 at 1546.185 kb on + strand at 1546.185 kb on + strand at 1546.258 kb on - strand at 1546.258 kb on - strand at 1546.300 kb on - strand at 1546.311 kb on + strand at 1546.367 kb on - strand at 1546.395 kb on + strand at 1546.395 kb on + strand at 1546.465 kb on + strand at 1546.465 kb on + strand at 1546.465 kb on + strand at 1546.465 kb on + strand at 1546.466 kb on - strand at 1546.466 kb on - strand at 1546.467 kb on + strand at 1546.467 kb on + strand at 1546.551 kb on - strand, within Echvi_1335 at 1546.551 kb on - strand, within Echvi_1335 at 1546.610 kb on - strand, within Echvi_1335 at 1546.614 kb on - strand, within Echvi_1335 at 1546.664 kb on - strand, within Echvi_1335 at 1546.752 kb on + strand, within Echvi_1335 at 1546.753 kb on - strand, within Echvi_1335 at 1546.762 kb on + strand, within Echvi_1335 at 1546.763 kb on - strand, within Echvi_1335 at 1546.763 kb on - strand, within Echvi_1335 at 1546.763 kb on - strand, within Echvi_1335 at 1546.763 kb on - strand, within Echvi_1335 at 1546.820 kb on + strand, within Echvi_1335 at 1546.828 kb on + strand, within Echvi_1335 at 1546.856 kb on + strand, within Echvi_1335 at 1546.883 kb on - strand, within Echvi_1335 at 1546.988 kb on + strand, within Echvi_1335 at 1546.989 kb on - strand, within Echvi_1335 at 1547.061 kb on - strand, within Echvi_1335 at 1547.124 kb on - strand, within Echvi_1335 at 1547.146 kb on - strand, within Echvi_1335 at 1547.149 kb on + strand, within Echvi_1335 at 1547.149 kb on + strand, within Echvi_1335 at 1547.150 kb on - strand, within Echvi_1335 at 1547.158 kb on + strand, within Echvi_1335 at 1547.158 kb on + strand, within Echvi_1335 at 1547.211 kb on - strand, within Echvi_1335 at 1547.246 kb on + strand at 1547.294 kb on - strand at 1547.294 kb on - strand at 1547.294 kb on - strand at 1547.309 kb on - strand at 1547.317 kb on + strand at 1547.339 kb on + strand at 1547.339 kb on + strand at 1547.343 kb on + strand at 1547.344 kb on - strand at 1547.354 kb on + strand at 1547.418 kb on - strand at 1547.423 kb on + strand at 1547.443 kb on + strand at 1547.443 kb on + strand at 1547.473 kb on + strand at 1547.474 kb on - strand at 1547.474 kb on - strand at 1547.505 kb on + strand at 1547.508 kb on + strand at 1547.508 kb on + strand at 1547.514 kb on - strand at 1547.524 kb on - strand at 1547.612 kb on - strand, within Echvi_1336 at 1547.635 kb on - strand, within Echvi_1336 at 1547.635 kb on - strand, within Echvi_1336 at 1547.804 kb on + strand, within Echvi_1336 at 1547.805 kb on - strand, within Echvi_1336 at 1547.805 kb on - strand, within Echvi_1336 at 1547.805 kb on - strand, within Echvi_1336 at 1547.870 kb on + strand, within Echvi_1336 at 1547.915 kb on + strand, within Echvi_1336 at 1547.916 kb on - strand, within Echvi_1336 at 1548.061 kb on + strand at 1548.084 kb on - strand at 1548.084 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 2 mM remove 1,545,537 - Echvi_1334 0.48 -0.5 1,545,537 - Echvi_1334 0.48 +0.9 1,545,620 - Echvi_1334 0.54 +1.4 1,545,620 - Echvi_1334 0.54 +0.2 1,545,631 + Echvi_1334 0.55 +0.8 1,545,631 + Echvi_1334 0.55 +2.6 1,545,632 - Echvi_1334 0.55 -0.8 1,545,632 - Echvi_1334 0.55 -0.8 1,545,634 - Echvi_1334 0.55 +1.4 1,545,712 + Echvi_1334 0.60 +1.6 1,545,713 - Echvi_1334 0.60 +2.0 1,545,814 - Echvi_1334 0.67 -0.5 1,545,835 + Echvi_1334 0.68 -0.1 1,545,837 + Echvi_1334 0.68 -0.4 1,545,837 + Echvi_1334 0.68 +0.3 1,545,838 - Echvi_1334 0.68 +2.2 1,545,838 - Echvi_1334 0.68 +2.2 1,545,838 - Echvi_1334 0.68 -0.0 1,546,022 - Echvi_1334 0.80 +2.0 1,546,144 + Echvi_1334 0.88 -0.3 1,546,144 + Echvi_1334 0.88 +0.2 1,546,144 + Echvi_1334 0.88 +0.9 1,546,145 - Echvi_1334 0.88 -0.0 1,546,185 + -0.7 1,546,185 + +0.8 1,546,258 - +0.6 1,546,258 - -0.6 1,546,300 - +1.6 1,546,311 + -0.6 1,546,367 - +0.7 1,546,395 + -0.7 1,546,395 + -0.6 1,546,465 + -0.9 1,546,465 + -1.0 1,546,465 + -0.3 1,546,465 + +0.1 1,546,466 - -0.2 1,546,466 - -0.0 1,546,467 + +0.3 1,546,467 + +2.0 1,546,551 - Echvi_1335 0.17 +0.7 1,546,551 - Echvi_1335 0.17 -0.9 1,546,610 - Echvi_1335 0.24 -2.5 1,546,614 - Echvi_1335 0.24 +1.5 1,546,664 - Echvi_1335 0.30 -0.8 1,546,752 + Echvi_1335 0.39 -0.6 1,546,753 - Echvi_1335 0.39 -0.8 1,546,762 + Echvi_1335 0.40 -1.0 1,546,763 - Echvi_1335 0.40 -1.2 1,546,763 - Echvi_1335 0.40 +0.9 1,546,763 - Echvi_1335 0.40 -0.0 1,546,763 - Echvi_1335 0.40 -0.0 1,546,820 + Echvi_1335 0.47 -1.2 1,546,828 + Echvi_1335 0.47 -0.0 1,546,856 + Echvi_1335 0.50 -0.9 1,546,883 - Echvi_1335 0.53 -0.9 1,546,988 + Echvi_1335 0.65 +0.5 1,546,989 - Echvi_1335 0.65 -0.7 1,547,061 - Echvi_1335 0.73 -2.2 1,547,124 - Echvi_1335 0.80 -0.5 1,547,146 - Echvi_1335 0.82 +0.4 1,547,149 + Echvi_1335 0.83 +0.6 1,547,149 + Echvi_1335 0.83 +0.6 1,547,150 - Echvi_1335 0.83 -0.7 1,547,158 + Echvi_1335 0.83 -0.2 1,547,158 + Echvi_1335 0.83 +3.8 1,547,211 - Echvi_1335 0.89 +0.8 1,547,246 + +0.6 1,547,294 - +1.2 1,547,294 - +1.0 1,547,294 - +0.0 1,547,309 - +1.1 1,547,317 + +2.0 1,547,339 + -0.8 1,547,339 + +0.4 1,547,343 + +0.9 1,547,344 - -0.2 1,547,354 + -0.8 1,547,418 - -0.3 1,547,423 + +0.9 1,547,443 + -0.1 1,547,443 + -1.1 1,547,473 + -0.7 1,547,474 - -0.9 1,547,474 - -1.6 1,547,505 + -0.4 1,547,508 + +1.0 1,547,508 + +0.3 1,547,514 - -0.3 1,547,524 - -1.5 1,547,612 - Echvi_1336 0.20 +0.3 1,547,635 - Echvi_1336 0.24 +1.7 1,547,635 - Echvi_1336 0.24 +0.2 1,547,804 + Echvi_1336 0.51 -1.7 1,547,805 - Echvi_1336 0.51 +0.8 1,547,805 - Echvi_1336 0.51 -1.8 1,547,805 - Echvi_1336 0.51 -0.2 1,547,870 + Echvi_1336 0.62 +0.2 1,547,915 + Echvi_1336 0.69 -0.4 1,547,916 - Echvi_1336 0.69 -1.4 1,548,061 + +0.6 1,548,084 - +0.4 1,548,084 - +0.4
Or see this region's nucleotide sequence