Experiment: m.b. Aluminum chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1284 and Echvi_1285 are separated by 61 nucleotides Echvi_1285 and Echvi_1286 overlap by 4 nucleotides Echvi_1286 and Echvi_1287 are separated by 102 nucleotides
Echvi_1284: Echvi_1284 - ABC-type sugar transport system, periplasmic component, at 1,472,513 to 1,473,463
_1284
Echvi_1285: Echvi_1285 - Transketolase, C-terminal subunit, at 1,473,525 to 1,474,484
_1285
Echvi_1286: Echvi_1286 - Transketolase, N-terminal subunit, at 1,474,481 to 1,475,323
_1286
Echvi_1287: Echvi_1287 - L-fucose isomerase and related proteins, at 1,475,426 to 1,476,853
_1287
Position (kb)
1473
1474
1475 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1472.538 kb on + strand at 1472.538 kb on + strand at 1472.538 kb on + strand at 1472.539 kb on - strand at 1472.546 kb on + strand at 1472.614 kb on + strand, within Echvi_1284 at 1472.616 kb on + strand, within Echvi_1284 at 1472.616 kb on + strand, within Echvi_1284 at 1472.616 kb on + strand, within Echvi_1284 at 1472.616 kb on + strand, within Echvi_1284 at 1472.616 kb on + strand, within Echvi_1284 at 1473.030 kb on + strand, within Echvi_1284 at 1473.057 kb on + strand, within Echvi_1284 at 1473.057 kb on + strand, within Echvi_1284 at 1473.057 kb on + strand, within Echvi_1284 at 1473.062 kb on - strand, within Echvi_1284 at 1473.247 kb on + strand, within Echvi_1284 at 1473.247 kb on + strand, within Echvi_1284 at 1473.346 kb on + strand, within Echvi_1284 at 1473.346 kb on + strand, within Echvi_1284 at 1473.346 kb on + strand, within Echvi_1284 at 1473.347 kb on - strand, within Echvi_1284 at 1473.347 kb on - strand, within Echvi_1284 at 1473.350 kb on + strand, within Echvi_1284 at 1473.356 kb on + strand, within Echvi_1284 at 1473.453 kb on - strand at 1473.522 kb on + strand at 1473.526 kb on + strand at 1473.526 kb on + strand at 1473.527 kb on - strand at 1473.585 kb on + strand at 1473.609 kb on + strand at 1473.614 kb on + strand at 1473.614 kb on + strand at 1473.614 kb on + strand at 1473.614 kb on + strand at 1473.614 kb on + strand at 1473.614 kb on + strand at 1473.614 kb on + strand at 1473.614 kb on + strand at 1473.615 kb on - strand at 1473.703 kb on + strand, within Echvi_1285 at 1473.783 kb on + strand, within Echvi_1285 at 1473.783 kb on + strand, within Echvi_1285 at 1473.783 kb on + strand, within Echvi_1285 at 1473.883 kb on - strand, within Echvi_1285 at 1474.033 kb on + strand, within Echvi_1285 at 1474.033 kb on + strand, within Echvi_1285 at 1474.033 kb on + strand, within Echvi_1285 at 1474.311 kb on + strand, within Echvi_1285 at 1474.311 kb on + strand, within Echvi_1285 at 1474.328 kb on - strand, within Echvi_1285 at 1474.438 kb on - strand at 1474.545 kb on + strand at 1474.749 kb on - strand, within Echvi_1286 at 1474.799 kb on - strand, within Echvi_1286 at 1474.803 kb on + strand, within Echvi_1286 at 1474.803 kb on + strand, within Echvi_1286 at 1474.803 kb on + strand, within Echvi_1286 at 1474.804 kb on - strand, within Echvi_1286 at 1474.834 kb on + strand, within Echvi_1286 at 1474.835 kb on - strand, within Echvi_1286 at 1474.837 kb on - strand, within Echvi_1286 at 1474.952 kb on + strand, within Echvi_1286 at 1474.952 kb on + strand, within Echvi_1286 at 1475.017 kb on + strand, within Echvi_1286 at 1475.139 kb on + strand, within Echvi_1286 at 1475.139 kb on + strand, within Echvi_1286 at 1475.265 kb on + strand at 1475.266 kb on - strand at 1475.346 kb on + strand at 1475.347 kb on - strand at 1475.439 kb on + strand at 1475.440 kb on - strand at 1475.455 kb on + strand at 1475.457 kb on + strand at 1475.482 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 2 mM remove 1,472,538 + +0.3 1,472,538 + -1.6 1,472,538 + +0.2 1,472,539 - -0.3 1,472,546 + +0.4 1,472,614 + Echvi_1284 0.11 +0.9 1,472,616 + Echvi_1284 0.11 -1.2 1,472,616 + Echvi_1284 0.11 -0.9 1,472,616 + Echvi_1284 0.11 +1.2 1,472,616 + Echvi_1284 0.11 +0.0 1,472,616 + Echvi_1284 0.11 -3.4 1,473,030 + Echvi_1284 0.54 +1.2 1,473,057 + Echvi_1284 0.57 -0.9 1,473,057 + Echvi_1284 0.57 +1.8 1,473,057 + Echvi_1284 0.57 +0.1 1,473,062 - Echvi_1284 0.58 -1.5 1,473,247 + Echvi_1284 0.77 -0.3 1,473,247 + Echvi_1284 0.77 -0.1 1,473,346 + Echvi_1284 0.88 +0.8 1,473,346 + Echvi_1284 0.88 -1.3 1,473,346 + Echvi_1284 0.88 +0.6 1,473,347 - Echvi_1284 0.88 +1.4 1,473,347 - Echvi_1284 0.88 +2.0 1,473,350 + Echvi_1284 0.88 +1.1 1,473,356 + Echvi_1284 0.89 +0.4 1,473,453 - +0.9 1,473,522 + -1.0 1,473,526 + -0.1 1,473,526 + -0.1 1,473,527 - +0.4 1,473,585 + -1.4 1,473,609 + -2.4 1,473,614 + -0.3 1,473,614 + -0.5 1,473,614 + -0.7 1,473,614 + -0.5 1,473,614 + -0.0 1,473,614 + -0.8 1,473,614 + +0.5 1,473,614 + -2.6 1,473,615 - +1.1 1,473,703 + Echvi_1285 0.19 +1.5 1,473,783 + Echvi_1285 0.27 -0.1 1,473,783 + Echvi_1285 0.27 +0.5 1,473,783 + Echvi_1285 0.27 +0.7 1,473,883 - Echvi_1285 0.37 +1.9 1,474,033 + Echvi_1285 0.53 +1.2 1,474,033 + Echvi_1285 0.53 +0.1 1,474,033 + Echvi_1285 0.53 +0.5 1,474,311 + Echvi_1285 0.82 -0.6 1,474,311 + Echvi_1285 0.82 +0.9 1,474,328 - Echvi_1285 0.84 +1.6 1,474,438 - +0.6 1,474,545 + -0.2 1,474,749 - Echvi_1286 0.32 -0.0 1,474,799 - Echvi_1286 0.38 +1.6 1,474,803 + Echvi_1286 0.38 -0.5 1,474,803 + Echvi_1286 0.38 -0.8 1,474,803 + Echvi_1286 0.38 -2.3 1,474,804 - Echvi_1286 0.38 +2.1 1,474,834 + Echvi_1286 0.42 +0.3 1,474,835 - Echvi_1286 0.42 +1.2 1,474,837 - Echvi_1286 0.42 +1.3 1,474,952 + Echvi_1286 0.56 -0.6 1,474,952 + Echvi_1286 0.56 +1.0 1,475,017 + Echvi_1286 0.64 -0.8 1,475,139 + Echvi_1286 0.78 +0.4 1,475,139 + Echvi_1286 0.78 -0.4 1,475,265 + -0.1 1,475,266 - +1.4 1,475,346 + -0.3 1,475,347 - -1.3 1,475,439 + +0.4 1,475,440 - +0.6 1,475,455 + -1.0 1,475,457 + -1.3 1,475,482 + +0.4
Or see this region's nucleotide sequence