Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1238

Experiment: m.b. Aluminum chloride 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Aluminum chloride 2 mM
1,419,673	-		Echvi_1235	0.52	+0.2
1,419,704	+		Echvi_1235	0.57	-1.1
1,419,704	+		Echvi_1235	0.57	+0.2
1,419,705	-		Echvi_1235	0.57	+1.2
1,419,705	-		Echvi_1235	0.57	-0.9
1,419,705	-		Echvi_1235	0.57	-0.8
1,419,708	+		Echvi_1235	0.58	-0.3
1,419,708	+		Echvi_1235	0.58	-0.7
1,419,757	-		Echvi_1235	0.66	-1.8
1,419,760	+		Echvi_1235	0.66	-1.0
1,419,760	+		Echvi_1235	0.66	-0.4
1,419,761	-		Echvi_1235	0.67	+0.3
1,419,761	-		Echvi_1235	0.67	+0.3
1,419,761	-		Echvi_1235	0.67	+2.0
1,419,761	-		Echvi_1235	0.67	-0.6
1,419,793	+		Echvi_1235	0.72	-0.5
1,419,793	+		Echvi_1235	0.72	-2.2
1,419,794	-		Echvi_1235	0.72	-0.6
1,419,794	-		Echvi_1235	0.72	+1.0
1,419,814	-		Echvi_1235	0.75	+0.4
1,419,814	-		Echvi_1235	0.75	+0.6
1,419,961	+				-0.4
1,419,966	+				-0.3
1,419,967	-				+0.3
1,420,018	-				+1.5
1,420,093	-		Echvi_1236	0.31	+2.3
1,420,093	-		Echvi_1236	0.31	+0.1
1,420,144	+		Echvi_1236	0.51	-0.8
1,420,144	+		Echvi_1236	0.51	+1.8
1,420,159	+		Echvi_1236	0.57	-0.8
1,420,252	-				-0.2
1,420,271	+				-1.6
1,420,271	+				-0.1
1,420,272	-				+0.8
1,420,272	-				+1.7
1,420,298	-		Echvi_1237	0.15	-0.3
1,420,353	-		Echvi_1237	0.33	+1.3
1,420,362	-		Echvi_1237	0.36	+0.8
1,420,362	-		Echvi_1237	0.36	+1.5
1,420,428	+		Echvi_1237	0.57	-0.1
1,420,429	-		Echvi_1237	0.57	+0.2
1,420,463	+		Echvi_1237	0.68	+0.2
1,420,486	+		Echvi_1237	0.75	+0.3
1,420,487	-		Echvi_1237	0.75	+1.4
1,420,487	-		Echvi_1237	0.75	+0.1
1,420,494	+		Echvi_1237	0.77	+0.7
1,420,536	-				-0.3
1,420,551	-				+1.3
1,420,560	-				-0.8
1,420,560	-				-0.0
1,420,560	-				-0.3
1,420,560	-				+1.2
1,420,565	-				+0.4
1,420,609	+				-0.2
1,420,662	+				-0.5
1,420,662	+				+2.6
1,420,663	-				-1.5
1,420,663	-				+1.4
1,420,663	-				-1.7
1,420,666	+				+0.5
1,420,666	+				+1.9
1,420,666	+				-0.3
1,420,667	-				+0.7
1,420,668	+				+0.8
1,420,703	+				-0.6
1,420,704	-				+0.0
1,420,706	+				+0.1
1,420,707	-				-3.0
1,420,719	+				+0.4
1,420,723	-		Echvi_1238	0.11	-0.1
1,420,970	+		Echvi_1238	0.53	+0.2
1,420,970	+		Echvi_1238	0.53	+0.9
1,420,970	+		Echvi_1238	0.53	+1.1
1,420,971	-		Echvi_1238	0.53	-1.6
1,420,971	-		Echvi_1238	0.53	-0.9
1,420,984	-		Echvi_1238	0.55	+0.7
1,420,984	-		Echvi_1238	0.55	+1.0
1,421,090	+		Echvi_1238	0.73	-1.3
1,421,091	-		Echvi_1238	0.74	+0.3
1,421,102	+		Echvi_1238	0.75	+1.0
1,421,119	+		Echvi_1238	0.78	+0.6
1,421,119	+		Echvi_1238	0.78	-2.5
1,421,119	+		Echvi_1238	0.78	-2.4
1,421,120	-		Echvi_1238	0.78	-2.5
1,421,120	-		Echvi_1238	0.78	+1.0
1,421,120	-		Echvi_1238	0.78	-1.0
1,421,255	-				-0.6
1,421,257	-				-1.2
1,421,307	+				-2.8
1,421,317	+				-0.5
1,421,318	-				-0.7
1,421,318	-				+0.4
1,421,626	+		Echvi_1239	0.45	-2.2
1,421,685	-		Echvi_1239	0.54	-0.6
1,421,685	-		Echvi_1239	0.54	-1.7
1,421,763	+		Echvi_1239	0.65	+1.0
1,421,884	+		Echvi_1239	0.82	+1.0
1,421,885	-		Echvi_1239	0.82	-1.9
1,421,920	+		Echvi_1239	0.87	-2.4
1,422,016	-				-1.5
1,422,016	-				-0.1
1,422,016	-				-0.8
1,422,016	-				+0.2
1,422,016	-				-1.2
1,422,016	-				+0.6
1,422,020	-				-2.1
1,422,036	+				+1.4
1,422,070	+				-2.2
1,422,071	-				-1.0
1,422,100	+				-1.3
1,422,100	+				+0.1
1,422,105	+				-0.9
1,422,114	+				-0.5
1,422,114	+				-1.2
1,422,115	-				+1.8
1,422,115	-				+0.5
1,422,146	+				+1.3
1,422,146	+				-1.8
1,422,146	+				-1.1
1,422,147	-				-0.3
1,422,147	-				-0.3
1,422,147	-				-2.2
1,422,147	-				-0.9
1,422,147	-				+0.4
1,422,198	-				-1.2
1,422,207	+				+0.0
1,422,208	-				+1.0
1,422,208	-				+1.0
1,422,208	-				+0.8