Experiment: m.b. Aluminum chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0683 and Echvi_0684 are separated by 24 nucleotides Echvi_0684 and Echvi_0685 are separated by 352 nucleotides
Echvi_0683: Echvi_0683 - Putative regulator of cell autolysis, at 770,427 to 772,589
_0683
Echvi_0684: Echvi_0684 - hypothetical protein, at 772,614 to 773,042
_0684
Echvi_0685: Echvi_0685 - Response regulator of the LytR/AlgR family, at 773,395 to 774,165
_0685
Position (kb)
772
773
774 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 771.688 kb on + strand, within Echvi_0683 at 771.711 kb on - strand, within Echvi_0683 at 771.729 kb on - strand, within Echvi_0683 at 771.912 kb on - strand, within Echvi_0683 at 771.984 kb on - strand, within Echvi_0683 at 772.044 kb on + strand, within Echvi_0683 at 772.045 kb on - strand, within Echvi_0683 at 772.046 kb on + strand, within Echvi_0683 at 772.046 kb on + strand, within Echvi_0683 at 772.046 kb on + strand, within Echvi_0683 at 772.046 kb on + strand, within Echvi_0683 at 772.131 kb on - strand, within Echvi_0683 at 772.140 kb on + strand, within Echvi_0683 at 772.141 kb on - strand, within Echvi_0683 at 772.145 kb on - strand, within Echvi_0683 at 772.182 kb on + strand, within Echvi_0683 at 772.182 kb on + strand, within Echvi_0683 at 772.182 kb on + strand, within Echvi_0683 at 772.193 kb on + strand, within Echvi_0683 at 772.193 kb on + strand, within Echvi_0683 at 772.194 kb on - strand, within Echvi_0683 at 772.207 kb on + strand, within Echvi_0683 at 772.208 kb on - strand, within Echvi_0683 at 772.208 kb on - strand, within Echvi_0683 at 772.255 kb on + strand, within Echvi_0683 at 772.348 kb on + strand, within Echvi_0683 at 772.348 kb on + strand, within Echvi_0683 at 772.349 kb on - strand, within Echvi_0683 at 772.349 kb on - strand, within Echvi_0683 at 772.380 kb on - strand at 772.535 kb on + strand at 772.549 kb on + strand at 772.549 kb on + strand at 772.549 kb on + strand at 772.550 kb on - strand at 772.553 kb on + strand at 772.553 kb on + strand at 772.553 kb on + strand at 772.553 kb on + strand at 772.553 kb on + strand at 772.553 kb on + strand at 772.554 kb on - strand at 772.554 kb on - strand at 772.554 kb on - strand at 772.554 kb on - strand at 772.554 kb on - strand at 772.587 kb on + strand at 772.587 kb on + strand at 772.609 kb on + strand at 772.609 kb on + strand at 772.610 kb on - strand at 772.641 kb on - strand at 772.664 kb on + strand, within Echvi_0684 at 772.664 kb on + strand, within Echvi_0684 at 772.708 kb on + strand, within Echvi_0684 at 772.740 kb on + strand, within Echvi_0684 at 772.740 kb on + strand, within Echvi_0684 at 772.741 kb on - strand, within Echvi_0684 at 772.758 kb on - strand, within Echvi_0684 at 772.784 kb on + strand, within Echvi_0684 at 772.784 kb on + strand at 772.785 kb on - strand, within Echvi_0684 at 772.789 kb on + strand, within Echvi_0684 at 772.804 kb on + strand, within Echvi_0684 at 772.804 kb on + strand, within Echvi_0684 at 772.805 kb on - strand, within Echvi_0684 at 772.922 kb on - strand, within Echvi_0684 at 772.982 kb on - strand, within Echvi_0684 at 773.017 kb on + strand at 773.018 kb on - strand at 773.018 kb on - strand at 773.042 kb on + strand at 773.043 kb on - strand at 773.049 kb on - strand at 773.055 kb on + strand at 773.056 kb on - strand at 773.086 kb on + strand at 773.091 kb on - strand at 773.091 kb on - strand at 773.169 kb on - strand at 773.190 kb on + strand at 773.190 kb on + strand at 773.190 kb on + strand at 773.212 kb on + strand at 773.260 kb on - strand at 773.278 kb on - strand at 773.281 kb on - strand at 773.281 kb on - strand at 773.283 kb on + strand at 773.319 kb on + strand at 773.325 kb on + strand at 773.325 kb on + strand at 773.329 kb on + strand at 773.338 kb on - strand at 773.349 kb on + strand at 773.349 kb on + strand at 773.351 kb on + strand at 773.354 kb on + strand at 773.354 kb on + strand at 773.360 kb on - strand at 773.385 kb on + strand at 773.385 kb on + strand at 773.386 kb on - strand at 773.387 kb on + strand at 773.402 kb on + strand at 773.444 kb on + strand at 773.445 kb on - strand at 773.453 kb on + strand at 773.474 kb on + strand, within Echvi_0685 at 773.526 kb on + strand, within Echvi_0685 at 773.526 kb on + strand, within Echvi_0685 at 773.526 kb on + strand, within Echvi_0685 at 773.527 kb on - strand, within Echvi_0685 at 773.558 kb on + strand, within Echvi_0685 at 773.559 kb on - strand, within Echvi_0685 at 773.611 kb on + strand, within Echvi_0685 at 773.625 kb on - strand, within Echvi_0685 at 773.668 kb on + strand, within Echvi_0685 at 773.668 kb on + strand, within Echvi_0685 at 773.812 kb on - strand, within Echvi_0685 at 773.814 kb on + strand, within Echvi_0685 at 773.814 kb on + strand, within Echvi_0685 at 773.862 kb on + strand, within Echvi_0685 at 773.884 kb on + strand, within Echvi_0685 at 773.884 kb on + strand, within Echvi_0685 at 773.906 kb on - strand, within Echvi_0685 at 773.921 kb on + strand, within Echvi_0685 at 773.921 kb on + strand, within Echvi_0685 at 773.943 kb on - strand, within Echvi_0685 at 774.032 kb on - strand, within Echvi_0685
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 2 mM remove 771,688 + Echvi_0683 0.58 -1.0 771,711 - Echvi_0683 0.59 +0.8 771,729 - Echvi_0683 0.60 -0.5 771,912 - Echvi_0683 0.69 +1.7 771,984 - Echvi_0683 0.72 +0.2 772,044 + Echvi_0683 0.75 -0.1 772,045 - Echvi_0683 0.75 -0.1 772,046 + Echvi_0683 0.75 +0.0 772,046 + Echvi_0683 0.75 -1.7 772,046 + Echvi_0683 0.75 +0.5 772,046 + Echvi_0683 0.75 +1.7 772,131 - Echvi_0683 0.79 -0.4 772,140 + Echvi_0683 0.79 +0.4 772,141 - Echvi_0683 0.79 -0.3 772,145 - Echvi_0683 0.79 -1.2 772,182 + Echvi_0683 0.81 +0.0 772,182 + Echvi_0683 0.81 +0.3 772,182 + Echvi_0683 0.81 -0.3 772,193 + Echvi_0683 0.82 -1.0 772,193 + Echvi_0683 0.82 -1.1 772,194 - Echvi_0683 0.82 -0.6 772,207 + Echvi_0683 0.82 +1.0 772,208 - Echvi_0683 0.82 +0.2 772,208 - Echvi_0683 0.82 +1.8 772,255 + Echvi_0683 0.85 +0.1 772,348 + Echvi_0683 0.89 -0.5 772,348 + Echvi_0683 0.89 +0.4 772,349 - Echvi_0683 0.89 +2.6 772,349 - Echvi_0683 0.89 -1.2 772,380 - -1.4 772,535 + +1.6 772,549 + -0.0 772,549 + -0.4 772,549 + +0.5 772,550 - -0.7 772,553 + +0.5 772,553 + +0.3 772,553 + -0.1 772,553 + -1.9 772,553 + +0.3 772,553 + +0.3 772,554 - -0.3 772,554 - -1.3 772,554 - -1.2 772,554 - +0.2 772,554 - +1.7 772,587 + +0.1 772,587 + -0.8 772,609 + +1.3 772,609 + +2.0 772,610 - +1.4 772,641 - -1.0 772,664 + Echvi_0684 0.12 +1.6 772,664 + Echvi_0684 0.12 -1.1 772,708 + Echvi_0684 0.22 +0.1 772,740 + Echvi_0684 0.29 -1.9 772,740 + Echvi_0684 0.29 +1.0 772,741 - Echvi_0684 0.30 +2.3 772,758 - Echvi_0684 0.34 +0.3 772,784 + Echvi_0684 0.40 -0.4 772,784 + +0.4 772,785 - Echvi_0684 0.40 +0.5 772,789 + Echvi_0684 0.41 +1.2 772,804 + Echvi_0684 0.44 +0.1 772,804 + Echvi_0684 0.44 +0.2 772,805 - Echvi_0684 0.45 -0.3 772,922 - Echvi_0684 0.72 +1.1 772,982 - Echvi_0684 0.86 +1.2 773,017 + -1.8 773,018 - -1.0 773,018 - -0.3 773,042 + +1.2 773,043 - +1.3 773,049 - -2.8 773,055 + -1.5 773,056 - +0.5 773,086 + -0.8 773,091 - -0.2 773,091 - +0.4 773,169 - -0.3 773,190 + +1.0 773,190 + +1.0 773,190 + +0.7 773,212 + -1.4 773,260 - -0.1 773,278 - -1.2 773,281 - +1.0 773,281 - -1.5 773,283 + -0.4 773,319 + -1.0 773,325 + +0.9 773,325 + +0.8 773,329 + -1.0 773,338 - -0.3 773,349 + +0.2 773,349 + -2.2 773,351 + -0.5 773,354 + -1.0 773,354 + -0.3 773,360 - +0.5 773,385 + -0.7 773,385 + -0.2 773,386 - +1.0 773,387 + -0.5 773,402 + -0.3 773,444 + +0.2 773,445 - +0.6 773,453 + -0.5 773,474 + Echvi_0685 0.10 +0.5 773,526 + Echvi_0685 0.17 -0.5 773,526 + Echvi_0685 0.17 -0.2 773,526 + Echvi_0685 0.17 +0.2 773,527 - Echvi_0685 0.17 +0.6 773,558 + Echvi_0685 0.21 +0.1 773,559 - Echvi_0685 0.21 -0.2 773,611 + Echvi_0685 0.28 +0.1 773,625 - Echvi_0685 0.30 +0.1 773,668 + Echvi_0685 0.35 -1.3 773,668 + Echvi_0685 0.35 +0.4 773,812 - Echvi_0685 0.54 -2.2 773,814 + Echvi_0685 0.54 +0.6 773,814 + Echvi_0685 0.54 -1.3 773,862 + Echvi_0685 0.61 +0.7 773,884 + Echvi_0685 0.63 -0.3 773,884 + Echvi_0685 0.63 +0.6 773,906 - Echvi_0685 0.66 -1.2 773,921 + Echvi_0685 0.68 +1.2 773,921 + Echvi_0685 0.68 -0.6 773,943 - Echvi_0685 0.71 -0.8 774,032 - Echvi_0685 0.83 -0.5
Or see this region's nucleotide sequence