Experiment: m.b. Aluminum chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0332 and Echvi_0333 are separated by 12 nucleotides Echvi_0333 and Echvi_0334 are separated by 81 nucleotides
Echvi_0332: Echvi_0332 - Zn-dependent protease with chaperone function, at 349,344 to 350,576
_0332
Echvi_0333: Echvi_0333 - Bacteroidetes-specific putative membrane protein, at 350,589 to 351,638
_0333
Echvi_0334: Echvi_0334 - hypothetical protein, at 351,720 to 357,350
_0334
Position (kb)
350
351
352 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5 at 349.722 kb on - strand, within Echvi_0332 at 349.733 kb on + strand, within Echvi_0332 at 349.733 kb on + strand, within Echvi_0332 at 349.734 kb on - strand, within Echvi_0332 at 349.734 kb on - strand, within Echvi_0332 at 349.734 kb on - strand, within Echvi_0332 at 349.734 kb on - strand, within Echvi_0332 at 349.734 kb on - strand, within Echvi_0332 at 349.736 kb on - strand, within Echvi_0332 at 349.736 kb on - strand, within Echvi_0332 at 349.781 kb on + strand, within Echvi_0332 at 349.781 kb on + strand, within Echvi_0332 at 349.781 kb on + strand, within Echvi_0332 at 349.782 kb on - strand, within Echvi_0332 at 349.782 kb on - strand, within Echvi_0332 at 349.782 kb on - strand, within Echvi_0332 at 349.782 kb on - strand, within Echvi_0332 at 349.782 kb on - strand, within Echvi_0332 at 349.800 kb on - strand, within Echvi_0332 at 349.805 kb on - strand, within Echvi_0332 at 349.805 kb on - strand, within Echvi_0332 at 349.921 kb on + strand, within Echvi_0332 at 349.971 kb on - strand, within Echvi_0332 at 350.021 kb on + strand, within Echvi_0332 at 350.131 kb on + strand, within Echvi_0332 at 350.207 kb on + strand, within Echvi_0332 at 350.207 kb on + strand, within Echvi_0332 at 350.207 kb on + strand, within Echvi_0332 at 350.208 kb on - strand, within Echvi_0332 at 350.208 kb on - strand, within Echvi_0332 at 350.208 kb on - strand, within Echvi_0332 at 350.208 kb on - strand, within Echvi_0332 at 350.413 kb on + strand, within Echvi_0332 at 350.414 kb on - strand, within Echvi_0332 at 350.513 kb on + strand at 350.555 kb on - strand at 350.587 kb on + strand at 350.615 kb on + strand at 350.615 kb on + strand at 350.616 kb on - strand at 350.716 kb on + strand, within Echvi_0333 at 350.716 kb on + strand, within Echvi_0333 at 350.717 kb on - strand, within Echvi_0333 at 350.812 kb on + strand, within Echvi_0333 at 350.812 kb on + strand, within Echvi_0333 at 350.813 kb on - strand, within Echvi_0333 at 350.857 kb on + strand, within Echvi_0333 at 350.857 kb on + strand, within Echvi_0333 at 350.858 kb on - strand, within Echvi_0333 at 350.863 kb on + strand, within Echvi_0333 at 350.863 kb on + strand, within Echvi_0333 at 350.863 kb on + strand, within Echvi_0333 at 350.863 kb on + strand, within Echvi_0333 at 350.864 kb on - strand, within Echvi_0333 at 350.864 kb on - strand, within Echvi_0333 at 350.903 kb on + strand, within Echvi_0333 at 350.903 kb on + strand, within Echvi_0333 at 350.905 kb on + strand, within Echvi_0333 at 350.905 kb on + strand, within Echvi_0333 at 350.939 kb on - strand, within Echvi_0333 at 350.942 kb on + strand, within Echvi_0333 at 350.942 kb on + strand, within Echvi_0333 at 350.942 kb on + strand, within Echvi_0333 at 350.942 kb on + strand, within Echvi_0333 at 350.943 kb on - strand, within Echvi_0333 at 350.943 kb on - strand, within Echvi_0333 at 350.977 kb on - strand, within Echvi_0333 at 351.061 kb on - strand, within Echvi_0333 at 351.062 kb on + strand, within Echvi_0333 at 351.165 kb on - strand, within Echvi_0333 at 351.165 kb on - strand, within Echvi_0333 at 351.165 kb on - strand, within Echvi_0333 at 351.236 kb on - strand, within Echvi_0333 at 351.236 kb on - strand, within Echvi_0333 at 351.256 kb on + strand, within Echvi_0333 at 351.257 kb on - strand, within Echvi_0333 at 351.257 kb on - strand, within Echvi_0333 at 351.257 kb on - strand, within Echvi_0333 at 351.261 kb on - strand, within Echvi_0333 at 351.261 kb on - strand, within Echvi_0333 at 351.261 kb on - strand, within Echvi_0333 at 351.261 kb on - strand, within Echvi_0333 at 351.310 kb on + strand, within Echvi_0333 at 351.310 kb on + strand, within Echvi_0333 at 351.310 kb on + strand, within Echvi_0333 at 351.316 kb on + strand, within Echvi_0333 at 351.316 kb on + strand, within Echvi_0333 at 351.316 kb on + strand, within Echvi_0333 at 351.316 kb on + strand, within Echvi_0333 at 351.316 kb on + strand, within Echvi_0333 at 351.316 kb on + strand, within Echvi_0333 at 351.316 kb on + strand, within Echvi_0333 at 351.316 kb on + strand, within Echvi_0333 at 351.316 kb on + strand at 351.316 kb on + strand, within Echvi_0333 at 351.316 kb on + strand, within Echvi_0333 at 351.316 kb on + strand, within Echvi_0333 at 351.316 kb on + strand, within Echvi_0333 at 351.316 kb on + strand, within Echvi_0333 at 351.316 kb on + strand, within Echvi_0333 at 351.316 kb on + strand, within Echvi_0333 at 351.317 kb on - strand, within Echvi_0333 at 351.317 kb on - strand, within Echvi_0333 at 351.317 kb on - strand, within Echvi_0333 at 351.317 kb on - strand, within Echvi_0333 at 351.317 kb on - strand, within Echvi_0333 at 351.317 kb on - strand, within Echvi_0333 at 351.317 kb on - strand, within Echvi_0333 at 351.317 kb on - strand, within Echvi_0333 at 351.317 kb on - strand, within Echvi_0333 at 351.317 kb on - strand, within Echvi_0333 at 351.317 kb on - strand, within Echvi_0333 at 351.317 kb on - strand, within Echvi_0333 at 351.317 kb on - strand, within Echvi_0333 at 351.360 kb on + strand, within Echvi_0333 at 351.360 kb on + strand, within Echvi_0333 at 351.361 kb on - strand, within Echvi_0333 at 351.361 kb on - strand, within Echvi_0333 at 351.395 kb on + strand, within Echvi_0333 at 351.396 kb on - strand, within Echvi_0333 at 351.398 kb on - strand, within Echvi_0333 at 351.414 kb on - strand, within Echvi_0333 at 351.435 kb on - strand, within Echvi_0333 at 351.435 kb on - strand, within Echvi_0333 at 351.439 kb on + strand, within Echvi_0333 at 351.440 kb on - strand, within Echvi_0333 at 351.440 kb on - strand, within Echvi_0333 at 351.468 kb on - strand, within Echvi_0333 at 351.484 kb on - strand, within Echvi_0333 at 351.495 kb on + strand, within Echvi_0333 at 351.496 kb on - strand, within Echvi_0333 at 351.544 kb on + strand at 351.544 kb on + strand at 351.545 kb on - strand at 351.545 kb on - strand at 351.545 kb on - strand at 351.553 kb on + strand at 351.553 kb on + strand at 351.576 kb on - strand at 351.576 kb on - strand at 351.600 kb on + strand at 351.600 kb on + strand at 351.600 kb on + strand at 351.601 kb on - strand at 351.601 kb on - strand at 351.601 kb on - strand at 351.601 kb on - strand at 351.619 kb on + strand at 351.619 kb on + strand at 351.619 kb on + strand at 351.619 kb on + strand at 351.620 kb on - strand at 351.620 kb on - strand at 351.621 kb on + strand at 351.621 kb on + strand at 351.621 kb on + strand at 351.621 kb on + strand at 351.621 kb on + strand at 351.621 kb on + strand at 351.621 kb on + strand at 351.621 kb on + strand at 351.621 kb on - strand at 351.622 kb on - strand at 351.622 kb on - strand at 351.622 kb on - strand at 351.622 kb on - strand at 351.622 kb on - strand at 351.622 kb on - strand at 351.622 kb on - strand at 351.622 kb on - strand at 351.622 kb on - strand at 351.622 kb on - strand at 351.622 kb on - strand at 351.622 kb on - strand at 351.622 kb on - strand at 351.622 kb on - strand at 351.622 kb on - strand at 351.622 kb on - strand at 351.622 kb on - strand at 351.622 kb on - strand at 351.623 kb on + strand at 351.623 kb on + strand at 351.623 kb on + strand at 351.623 kb on + strand at 351.623 kb on + strand at 351.623 kb on + strand at 351.623 kb on + strand at 351.624 kb on - strand at 351.624 kb on - strand at 351.624 kb on - strand at 351.624 kb on - strand at 351.624 kb on - strand at 351.624 kb on - strand at 351.624 kb on - strand at 351.625 kb on + strand at 351.626 kb on - strand at 351.672 kb on + strand at 351.703 kb on - strand at 351.714 kb on + strand at 351.715 kb on - strand at 351.717 kb on + strand at 351.718 kb on - strand at 351.742 kb on + strand at 351.742 kb on + strand at 351.820 kb on - strand at 351.828 kb on - strand at 351.870 kb on - strand at 351.873 kb on + strand at 352.007 kb on - strand at 352.023 kb on - strand at 352.023 kb on - strand at 352.033 kb on + strand at 352.033 kb on + strand at 352.034 kb on - strand at 352.034 kb on - strand at 352.067 kb on + strand at 352.067 kb on + strand at 352.129 kb on - strand at 352.131 kb on + strand at 352.134 kb on - strand at 352.134 kb on - strand at 352.167 kb on + strand at 352.174 kb on + strand at 352.175 kb on - strand at 352.175 kb on - strand at 352.175 kb on - strand at 352.306 kb on - strand, within Echvi_0334 at 352.317 kb on + strand, within Echvi_0334 at 352.356 kb on - strand, within Echvi_0334 at 352.400 kb on + strand, within Echvi_0334 at 352.593 kb on + strand, within Echvi_0334 at 352.600 kb on - strand, within Echvi_0334 at 352.602 kb on + strand, within Echvi_0334 at 352.602 kb on + strand, within Echvi_0334 at 352.607 kb on + strand, within Echvi_0334 at 352.607 kb on + strand, within Echvi_0334 at 352.607 kb on + strand, within Echvi_0334 at 352.608 kb on - strand, within Echvi_0334
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 2 mM remove 349,722 - Echvi_0332 0.31 -0.9 349,733 + Echvi_0332 0.32 -0.8 349,733 + Echvi_0332 0.32 -0.7 349,734 - Echvi_0332 0.32 +0.4 349,734 - Echvi_0332 0.32 +0.2 349,734 - Echvi_0332 0.32 +0.0 349,734 - Echvi_0332 0.32 +2.8 349,734 - Echvi_0332 0.32 -0.1 349,736 - Echvi_0332 0.32 -1.7 349,736 - Echvi_0332 0.32 -1.1 349,781 + Echvi_0332 0.35 +0.4 349,781 + Echvi_0332 0.35 -0.7 349,781 + Echvi_0332 0.35 -0.5 349,782 - Echvi_0332 0.36 +0.4 349,782 - Echvi_0332 0.36 -0.8 349,782 - Echvi_0332 0.36 -0.5 349,782 - Echvi_0332 0.36 +1.9 349,782 - Echvi_0332 0.36 -2.1 349,800 - Echvi_0332 0.37 -0.1 349,805 - Echvi_0332 0.37 +1.6 349,805 - Echvi_0332 0.37 -1.5 349,921 + Echvi_0332 0.47 -0.8 349,971 - Echvi_0332 0.51 +1.7 350,021 + Echvi_0332 0.55 +0.7 350,131 + Echvi_0332 0.64 +1.9 350,207 + Echvi_0332 0.70 +0.1 350,207 + Echvi_0332 0.70 -0.7 350,207 + Echvi_0332 0.70 +1.2 350,208 - Echvi_0332 0.70 -1.3 350,208 - Echvi_0332 0.70 -1.7 350,208 - Echvi_0332 0.70 -0.7 350,208 - Echvi_0332 0.70 -0.3 350,413 + Echvi_0332 0.87 -1.4 350,414 - Echvi_0332 0.87 +2.2 350,513 + +1.1 350,555 - -0.1 350,587 + +0.7 350,615 + +0.6 350,615 + +1.4 350,616 - +0.4 350,716 + Echvi_0333 0.12 +0.5 350,716 + Echvi_0333 0.12 -1.5 350,717 - Echvi_0333 0.12 +0.9 350,812 + Echvi_0333 0.21 +0.7 350,812 + Echvi_0333 0.21 +0.9 350,813 - Echvi_0333 0.21 +2.2 350,857 + Echvi_0333 0.26 +0.8 350,857 + Echvi_0333 0.26 +0.1 350,858 - Echvi_0333 0.26 -0.3 350,863 + Echvi_0333 0.26 +0.3 350,863 + Echvi_0333 0.26 -1.0 350,863 + Echvi_0333 0.26 +0.9 350,863 + Echvi_0333 0.26 +0.3 350,864 - Echvi_0333 0.26 +1.1 350,864 - Echvi_0333 0.26 +1.8 350,903 + Echvi_0333 0.30 +0.8 350,903 + Echvi_0333 0.30 -0.2 350,905 + Echvi_0333 0.30 +0.5 350,905 + Echvi_0333 0.30 +0.8 350,939 - Echvi_0333 0.33 +1.0 350,942 + Echvi_0333 0.34 +0.8 350,942 + Echvi_0333 0.34 +0.1 350,942 + Echvi_0333 0.34 +0.7 350,942 + Echvi_0333 0.34 -0.7 350,943 - Echvi_0333 0.34 -0.9 350,943 - Echvi_0333 0.34 +0.9 350,977 - Echvi_0333 0.37 +1.4 351,061 - Echvi_0333 0.45 +0.6 351,062 + Echvi_0333 0.45 +1.5 351,165 - Echvi_0333 0.55 +1.0 351,165 - Echvi_0333 0.55 +1.1 351,165 - Echvi_0333 0.55 +0.7 351,236 - Echvi_0333 0.62 +0.8 351,236 - Echvi_0333 0.62 +0.8 351,256 + Echvi_0333 0.64 -0.4 351,257 - Echvi_0333 0.64 +0.2 351,257 - Echvi_0333 0.64 +0.8 351,257 - Echvi_0333 0.64 +1.1 351,261 - Echvi_0333 0.64 +0.8 351,261 - Echvi_0333 0.64 -0.3 351,261 - Echvi_0333 0.64 +1.3 351,261 - Echvi_0333 0.64 +1.2 351,310 + Echvi_0333 0.69 +0.7 351,310 + Echvi_0333 0.69 +0.7 351,310 + Echvi_0333 0.69 -1.3 351,316 + Echvi_0333 0.69 +0.6 351,316 + Echvi_0333 0.69 +0.8 351,316 + Echvi_0333 0.69 +0.9 351,316 + Echvi_0333 0.69 +1.4 351,316 + Echvi_0333 0.69 +1.1 351,316 + Echvi_0333 0.69 +0.2 351,316 + Echvi_0333 0.69 +0.1 351,316 + Echvi_0333 0.69 +0.0 351,316 + +5.2 351,316 + Echvi_0333 0.69 +1.0 351,316 + Echvi_0333 0.69 -0.5 351,316 + Echvi_0333 0.69 +1.3 351,316 + Echvi_0333 0.69 +0.6 351,316 + Echvi_0333 0.69 +1.5 351,316 + Echvi_0333 0.69 +1.5 351,316 + Echvi_0333 0.69 +0.5 351,317 - Echvi_0333 0.69 +1.8 351,317 - Echvi_0333 0.69 +0.2 351,317 - Echvi_0333 0.69 +0.5 351,317 - Echvi_0333 0.69 +1.3 351,317 - Echvi_0333 0.69 +1.3 351,317 - Echvi_0333 0.69 -0.1 351,317 - Echvi_0333 0.69 -0.4 351,317 - Echvi_0333 0.69 -1.2 351,317 - Echvi_0333 0.69 +1.3 351,317 - Echvi_0333 0.69 +1.3 351,317 - Echvi_0333 0.69 +0.7 351,317 - Echvi_0333 0.69 +0.9 351,317 - Echvi_0333 0.69 +1.5 351,360 + Echvi_0333 0.73 +0.8 351,360 + Echvi_0333 0.73 +0.3 351,361 - Echvi_0333 0.74 +0.8 351,361 - Echvi_0333 0.74 +1.3 351,395 + Echvi_0333 0.77 +1.2 351,396 - Echvi_0333 0.77 +0.3 351,398 - Echvi_0333 0.77 +0.1 351,414 - Echvi_0333 0.79 +2.5 351,435 - Echvi_0333 0.81 -0.5 351,435 - Echvi_0333 0.81 +1.2 351,439 + Echvi_0333 0.81 +1.3 351,440 - Echvi_0333 0.81 +1.0 351,440 - Echvi_0333 0.81 +0.5 351,468 - Echvi_0333 0.84 +1.7 351,484 - Echvi_0333 0.85 +1.9 351,495 + Echvi_0333 0.86 +0.9 351,496 - Echvi_0333 0.86 +0.6 351,544 + +1.7 351,544 + +0.5 351,545 - +0.4 351,545 - +0.8 351,545 - +1.3 351,553 + +0.9 351,553 + +0.5 351,576 - +1.7 351,576 - +0.8 351,600 + +0.6 351,600 + +1.1 351,600 + +0.8 351,601 - +0.8 351,601 - +0.3 351,601 - +1.0 351,601 - +0.2 351,619 + +0.6 351,619 + +1.0 351,619 + +1.9 351,619 + +0.6 351,620 - +0.8 351,620 - -1.2 351,621 + +1.9 351,621 + +1.9 351,621 + +0.7 351,621 + +0.3 351,621 + -0.3 351,621 + -1.1 351,621 + +0.9 351,621 + +0.6 351,621 - +0.8 351,622 - -0.2 351,622 - -0.4 351,622 - -0.7 351,622 - +0.6 351,622 - -0.7 351,622 - +0.3 351,622 - +1.5 351,622 - +0.2 351,622 - +0.0 351,622 - +0.8 351,622 - +0.0 351,622 - -0.6 351,622 - +0.7 351,622 - +1.3 351,622 - +0.0 351,622 - -0.4 351,622 - +0.1 351,622 - +0.5 351,623 + +1.0 351,623 + +0.5 351,623 + +0.4 351,623 + +0.2 351,623 + +3.9 351,623 + +0.4 351,623 + -0.4 351,624 - -0.2 351,624 - +1.2 351,624 - +0.3 351,624 - +0.9 351,624 - +1.0 351,624 - +0.5 351,624 - +1.9 351,625 + +0.6 351,626 - +1.5 351,672 + +1.4 351,703 - +1.9 351,714 + -1.1 351,715 - +0.2 351,717 + -1.2 351,718 - -0.1 351,742 + -0.9 351,742 + +0.6 351,820 - -0.7 351,828 - +0.2 351,870 - +0.5 351,873 + +0.7 352,007 - +0.6 352,023 - +1.2 352,023 - +0.8 352,033 + +0.9 352,033 + +0.5 352,034 - +0.9 352,034 - +1.5 352,067 + +1.3 352,067 + +1.0 352,129 - +0.4 352,131 + +0.6 352,134 - +1.2 352,134 - +0.4 352,167 + +0.4 352,174 + -0.4 352,175 - +1.3 352,175 - +0.7 352,175 - +1.0 352,306 - Echvi_0334 0.10 +0.3 352,317 + Echvi_0334 0.11 +0.2 352,356 - Echvi_0334 0.11 +0.8 352,400 + Echvi_0334 0.12 +2.1 352,593 + Echvi_0334 0.16 +0.8 352,600 - Echvi_0334 0.16 +1.3 352,602 + Echvi_0334 0.16 +0.2 352,602 + Echvi_0334 0.16 +0.9 352,607 + Echvi_0334 0.16 +1.3 352,607 + Echvi_0334 0.16 +0.5 352,607 + Echvi_0334 0.16 -0.3 352,608 - Echvi_0334 0.16 +0.3
Or see this region's nucleotide sequence