Strain Fitness in Escherichia coli BW25113 around b4328

Experiment: nitrite 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrite 10 mM
4,555,398	-				+0.1
4,555,407	-				+0.3
4,555,415	+				+0.5
4,555,415	+				+0.0
4,555,498	+				+0.0
4,555,498	+	yjiE	b4327	0.11	+1.4
4,555,667	+	yjiE	b4327	0.29	+0.2
4,555,731	+	yjiE	b4327	0.36	+0.4
4,555,739	-				+0.0
4,555,764	-	yjiE	b4327	0.40	+1.3
4,555,764	-	yjiE	b4327	0.40	+0.0
4,555,791	-	yjiE	b4327	0.43	-0.4
4,555,976	+	yjiE	b4327	0.63	-0.5
4,556,042	-	yjiE	b4327	0.70	+0.7
4,556,106	+	yjiE	b4327	0.77	+0.5
4,556,168	+	yjiE	b4327	0.84	-0.3
4,556,168	+	yjiE	b4327	0.84	-0.4
4,556,334	-				+0.1
4,556,382	-				-1.1
4,556,382	-				+0.2
4,556,416	-				+0.6
4,556,449	-				+0.0
4,556,449	-				+0.8
4,556,463	+				+0.7
4,556,526	+	iadA	b4328	0.13	-1.1
4,556,552	-	iadA	b4328	0.15	-0.1
4,556,556	-	iadA	b4328	0.15	-1.0
4,556,568	-	iadA	b4328	0.16	-0.9
4,556,596	+	iadA	b4328	0.19	+1.6
4,556,596	+	iadA	b4328	0.19	+2.4
4,556,602	+	iadA	b4328	0.19	+1.3
4,556,644	+	iadA	b4328	0.23	+1.6
4,556,908	+	iadA	b4328	0.45	+1.0
4,556,942	+	iadA	b4328	0.48	-0.2
4,556,953	-	iadA	b4328	0.49	+0.8
4,556,953	-	iadA	b4328	0.49	+0.0
4,556,955	+	iadA	b4328	0.49	-0.4
4,556,982	-	iadA	b4328	0.52	-3.1
4,557,054	-	iadA	b4328	0.58	-1.0
4,557,054	-	iadA	b4328	0.58	-1.9
4,557,073	+	iadA	b4328	0.59	+0.0
4,557,120	-	iadA	b4328	0.63	-0.2
4,557,138	+	iadA	b4328	0.65	-0.5
4,557,246	-	iadA	b4328	0.74	-0.2
4,557,249	+	iadA	b4328	0.74	+0.0
4,557,257	-	iadA	b4328	0.75	+0.0
4,557,509	+				+0.4
4,557,623	-	yjiG	b4329	0.13	+0.8
4,557,665	-	yjiG	b4329	0.22	+0.4
4,557,665	-	yjiG	b4329	0.22	+0.4
4,557,667	-	yjiG	b4329	0.23	-0.2
4,557,793	+	yjiG	b4329	0.50	+0.3
4,557,793	+	yjiG	b4329	0.50	-0.6
4,557,801	-	yjiG	b4329	0.52	-0.3
4,557,801	-	yjiG	b4329	0.52	+0.0
4,557,837	-	yjiG	b4329	0.60	-0.4
4,557,837	-	yjiG	b4329	0.60	+0.1
4,558,050	-				+0.5
4,558,104	-	yjiH	b4330	0.12	-0.2
4,558,116	+	yjiH	b4330	0.14	+0.4
4,558,181	-	yjiH	b4330	0.24	+0.9
4,558,185	+	yjiH	b4330	0.24	+1.4
4,558,211	-	yjiH	b4330	0.28	-1.5
4,558,301	+	yjiH	b4330	0.41	+0.3
4,558,328	+	yjiH	b4330	0.45	+0.3
4,558,392	+	yjiH	b4330	0.54	+0.8
4,558,392	+	yjiH	b4330	0.54	-0.8
4,558,428	+	yjiH	b4330	0.60	-1.2