Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1796

Experiment: marine broth

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth
2,111,068	-				+0.9
2,111,075	-				-1.5
2,111,075	-				+0.2
2,111,075	-				-0.2
2,111,075	-				-0.5
2,111,075	-				+0.5
2,111,075	-				-1.3
2,111,078	-				-0.8
2,111,078	-				-0.5
2,111,079	+				-0.7
2,111,116	-				-0.2
2,111,181	+		Echvi_1795	0.23	+0.0
2,111,181	+		Echvi_1795	0.23	-0.8
2,111,183	+		Echvi_1795	0.24	+1.3
2,111,187	+		Echvi_1795	0.25	-1.0
2,111,188	-		Echvi_1795	0.25	-0.5
2,111,188	-		Echvi_1795	0.25	-0.5
2,111,188	-		Echvi_1795	0.25	+4.2
2,111,248	-		Echvi_1795	0.44	-1.2
2,111,256	+		Echvi_1795	0.47	-0.3
2,111,257	-		Echvi_1795	0.47	-0.8
2,111,281	+		Echvi_1795	0.55	-0.5
2,111,282	-		Echvi_1795	0.55	-0.4
2,111,388	-		Echvi_1795	0.88	-0.4
2,111,416	-				+0.9
2,111,418	+				-0.6
2,111,418	+				-0.7
2,111,423	-				+0.0
2,111,471	+				-0.5
2,111,483	+				+0.4
2,111,510	-				+0.3
2,111,511	+				-2.0
2,111,512	-				+0.0
2,111,568	-				-0.2
2,111,580	-				-0.2
2,111,582	-				+0.5
2,111,582	-				-0.1
2,111,582	-				+0.6
2,111,582	-				+1.9
2,111,585	+				-0.3
2,111,592	+				-0.4
2,111,592	+				-0.5
2,111,592	+				-0.7
2,111,593	-				+0.1
2,111,593	-				+1.3
2,111,594	+				-0.1
2,111,594	+				+0.1
2,111,594	+				-0.1
2,111,594	+				-0.0
2,111,595	-				+0.2
2,111,595	-				+1.4
2,111,595	-				+1.2
2,111,595	-				+0.2
2,111,595	-				+0.4
2,111,642	-				-1.1
2,111,642	-				+0.8
2,111,645	+				+0.3
2,111,646	-				+0.4
2,111,654	+				-1.7
2,111,654	+				+0.0
2,111,671	-				+0.0
2,111,706	-				+0.5
2,111,716	+				-0.0
2,111,717	-				+0.5
2,111,723	+				-0.7
2,111,750	-				-0.2
2,111,769	+				+0.7
2,111,769	+				-1.6
2,111,769	+				+0.0
2,111,793	-				-0.4
2,111,835	+				-0.1
2,111,851	-				+0.7
2,111,874	+				+0.5
2,111,909	+				+0.9
2,111,922	+				-1.7
2,111,938	+				-0.2
2,111,987	-				+0.3
2,112,089	+				+1.0
2,112,090	-				-0.2
2,112,090	-				-1.9
2,112,164	+				-1.9
2,112,187	+		Echvi_1796	0.11	+0.9
2,112,187	+		Echvi_1796	0.11	-1.9
2,112,188	-		Echvi_1796	0.11	-0.5
2,112,221	+		Echvi_1796	0.13	+0.2
2,112,221	+		Echvi_1796	0.13	+0.1
2,112,221	+		Echvi_1796	0.13	-0.7
2,112,221	+		Echvi_1796	0.13	+0.1
2,112,221	+		Echvi_1796	0.13	-0.6
2,112,222	-		Echvi_1796	0.13	-0.8
2,112,222	-		Echvi_1796	0.13	-0.1
2,112,225	+		Echvi_1796	0.13	-0.6
2,112,225	+				+1.9
2,112,226	-		Echvi_1796	0.13	+0.3
2,112,239	+		Echvi_1796	0.14	-1.0
2,112,284	-		Echvi_1796	0.16	+0.5
2,112,343	-		Echvi_1796	0.19	-1.1
2,112,343	-		Echvi_1796	0.19	+0.9
2,112,344	+		Echvi_1796	0.19	-0.3
2,112,345	-		Echvi_1796	0.19	+0.8
2,112,414	-		Echvi_1796	0.23	-0.2
2,112,414	-		Echvi_1796	0.23	-1.3
2,112,494	+		Echvi_1796	0.27	-1.1
2,112,509	+		Echvi_1796	0.28	+0.7
2,112,579	+		Echvi_1796	0.32	-0.5
2,112,601	-		Echvi_1796	0.33	-0.3
2,112,666	+		Echvi_1796	0.36	-1.5
2,112,674	-		Echvi_1796	0.37	+0.5
2,112,679	+		Echvi_1796	0.37	-0.6
2,112,679	+		Echvi_1796	0.37	-1.8
2,112,680	-		Echvi_1796	0.37	-1.9
2,112,680	-		Echvi_1796	0.37	-1.0
2,112,680	-		Echvi_1796	0.37	-1.7
2,112,691	+		Echvi_1796	0.38	-0.4
2,112,692	-		Echvi_1796	0.38	-0.5
2,112,692	-		Echvi_1796	0.38	-0.4
2,112,692	-		Echvi_1796	0.38	+0.1
2,112,694	-		Echvi_1796	0.38	-0.8
2,112,697	+		Echvi_1796	0.38	+0.2
2,112,697	+		Echvi_1796	0.38	-2.2
2,112,697	+		Echvi_1796	0.38	-1.0
2,112,698	-		Echvi_1796	0.38	-1.5
2,112,765	-		Echvi_1796	0.41	-1.1
2,112,932	+		Echvi_1796	0.50	-0.5
2,112,933	-		Echvi_1796	0.50	+0.9
2,112,933	-		Echvi_1796	0.50	+0.8
2,112,994	-		Echvi_1796	0.53	-2.3
2,112,994	-		Echvi_1796	0.53	-1.2
2,113,012	-		Echvi_1796	0.54	-0.3
2,113,032	+		Echvi_1796	0.55	-0.8
2,113,068	+		Echvi_1796	0.57	+0.3
2,113,069	-		Echvi_1796	0.57	+0.4
2,113,101	+		Echvi_1796	0.59	+1.1
2,113,101	+		Echvi_1796	0.59	-0.2
2,113,102	-		Echvi_1796	0.59	-1.2
2,113,132	+		Echvi_1796	0.61	-0.5
2,113,132	+		Echvi_1796	0.61	-0.3
2,113,132	+		Echvi_1796	0.61	-0.6
2,113,133	-		Echvi_1796	0.61	-1.0
2,113,135	-		Echvi_1796	0.61	-1.8
2,113,135	-		Echvi_1796	0.61	-1.3
2,113,222	-		Echvi_1796	0.65	-0.7
2,113,230	+		Echvi_1796	0.66	-1.2
2,113,282	-		Echvi_1796	0.68	-0.9
2,113,322	+		Echvi_1796	0.71	-0.2
2,113,331	+		Echvi_1796	0.71	-1.2
2,113,331	+		Echvi_1796	0.71	-0.9
2,113,345	-		Echvi_1796	0.72	-1.2
2,113,399	-		Echvi_1796	0.75	+0.4
2,113,449	+		Echvi_1796	0.77	+0.2
2,113,474	-		Echvi_1796	0.78	-0.1
2,113,494	+		Echvi_1796	0.80	-0.3
2,113,495	-		Echvi_1796	0.80	+0.6
2,113,543	+		Echvi_1796	0.82	-1.1
2,113,543	+		Echvi_1796	0.82	-0.1
2,113,544	-		Echvi_1796	0.82	-1.9
2,113,597	-		Echvi_1796	0.85	-1.8
2,113,662	+		Echvi_1796	0.88	-0.9
2,113,764	+				-0.0
2,113,784	+				-0.4
2,113,804	-				-0.7
2,113,804	-				-0.2
2,113,805	+				+0.6
2,113,872	+				-0.1
2,113,872	+				+1.4
2,113,873	-				-0.5
2,113,873	-				+0.3
2,113,876	-				-0.7
2,113,883	-				+1.2
2,113,896	+				+0.1
2,113,901	+				-0.8
2,113,905	+				+0.3
2,113,905	+				-1.9
2,113,906	-				+0.3
2,113,946	+				-0.2
2,114,033	-		Echvi_1797	0.16	-0.5
2,114,054	+		Echvi_1797	0.18	+1.9
2,114,054	+		Echvi_1797	0.18	+1.3
2,114,055	-		Echvi_1797	0.18	-1.2
2,114,064	+		Echvi_1797	0.19	-0.3
2,114,065	-		Echvi_1797	0.19	-0.1
2,114,085	+		Echvi_1797	0.21	-0.1
2,114,097	+		Echvi_1797	0.22	+0.2
2,114,104	+		Echvi_1797	0.23	+0.0
2,114,310	+		Echvi_1797	0.42	+0.4
2,114,311	-		Echvi_1797	0.42	-0.1
2,114,321	+		Echvi_1797	0.43	-0.5
2,114,321	+		Echvi_1797	0.43	-0.8
2,114,321	+		Echvi_1797	0.43	-1.0
2,114,322	-		Echvi_1797	0.43	-0.1
2,114,322	-		Echvi_1797	0.43	-0.7
2,114,382	+		Echvi_1797	0.49	-0.6
2,114,382	+		Echvi_1797	0.49	+0.8
2,114,383	-		Echvi_1797	0.49	-0.3
2,114,412	+		Echvi_1797	0.52	-0.4
2,114,412	+		Echvi_1797	0.52	-0.8
2,114,413	-		Echvi_1797	0.52	+1.0
2,114,453	-		Echvi_1797	0.56	+0.3
2,114,455	-		Echvi_1797	0.56	+3.9
2,114,530	+		Echvi_1797	0.63	-1.5
2,114,530	+		Echvi_1797	0.63	-1.2
2,114,530	+		Echvi_1797	0.63	-1.8
2,114,530	+		Echvi_1797	0.63	-0.2
2,114,531	-		Echvi_1797	0.64	-0.2
2,114,531	-		Echvi_1797	0.64	-0.3
2,114,554	+		Echvi_1797	0.66	-0.5
2,114,573	-		Echvi_1797	0.68	+0.9
2,114,573	-		Echvi_1797	0.68	-0.1
2,114,576	+		Echvi_1797	0.68	+0.8
2,114,635	-		Echvi_1797	0.73	+0.9
2,114,647	+		Echvi_1797	0.75	+0.2
2,114,647	+		Echvi_1797	0.75	+0.2
2,114,684	+		Echvi_1797	0.78	-0.7
2,114,684	+		Echvi_1797	0.78	+0.2
2,114,685	-		Echvi_1797	0.78	-1.0
2,114,714	-		Echvi_1797	0.81	-0.3
2,114,723	+		Echvi_1797	0.82	-0.9
2,114,734	-		Echvi_1797	0.83	-0.4
2,114,737	+		Echvi_1797	0.83	-0.0
2,114,737	+		Echvi_1797	0.83	+0.9
2,114,855	+				+0.0
2,114,856	-				+1.2
2,114,884	-				-0.3