Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1133

Experiment: marine broth

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth
1,294,282	-		Echvi_1131	0.32	-2.8
1,294,282	-		Echvi_1131	0.32	-2.4
1,294,292	+		Echvi_1131	0.33	-0.0
1,294,328	-		Echvi_1131	0.39	-0.7
1,294,386	+		Echvi_1131	0.47	-0.2
1,294,423	+		Echvi_1131	0.53	-0.1
1,294,424	-		Echvi_1131	0.53	-1.5
1,294,433	-		Echvi_1131	0.54	-0.1
1,294,459	+		Echvi_1131	0.58	+0.7
1,294,459	+		Echvi_1131	0.58	-0.4
1,294,460	-		Echvi_1131	0.58	-0.7
1,294,462	+		Echvi_1131	0.59	+0.2
1,294,462	+		Echvi_1131	0.59	+1.6
1,294,462	+		Echvi_1131	0.59	+0.1
1,294,490	-		Echvi_1131	0.63	-1.1
1,294,497	+		Echvi_1131	0.64	+0.7
1,294,497	+		Echvi_1131	0.64	+1.3
1,294,498	-		Echvi_1131	0.64	-1.0
1,294,518	-		Echvi_1131	0.67	-0.1
1,294,518	-		Echvi_1131	0.67	-0.3
1,294,523	+		Echvi_1131	0.68	+0.2
1,294,524	-		Echvi_1131	0.68	-0.4
1,294,524	-		Echvi_1131	0.68	+2.3
1,294,532	+		Echvi_1131	0.69	-0.3
1,294,532	+		Echvi_1131	0.69	-0.2
1,294,532	+		Echvi_1131	0.69	-1.4
1,294,532	+		Echvi_1131	0.69	+0.3
1,294,533	-		Echvi_1131	0.69	-1.5
1,294,537	+		Echvi_1131	0.70	-0.5
1,294,538	-		Echvi_1131	0.70	+0.1
1,294,538	-		Echvi_1131	0.70	+0.9
1,294,538	-		Echvi_1131	0.70	+1.1
1,294,538	-		Echvi_1131	0.70	+0.2
1,294,538	-		Echvi_1131	0.70	+0.7
1,294,538	-		Echvi_1131	0.70	-1.3
1,294,538	-		Echvi_1131	0.70	+1.6
1,294,542	+		Echvi_1131	0.71	-0.1
1,294,546	-		Echvi_1131	0.71	-1.1
1,294,555	+		Echvi_1131	0.73	+0.4
1,294,589	-		Echvi_1131	0.78	-0.2
1,294,737	-				+0.5
1,294,737	-				-1.1
1,294,864	-				+1.2
1,294,869	+				+1.0
1,294,869	+				-0.3
1,294,870	-				+0.0
1,294,870	-				+1.6
1,294,870	-				-0.6
1,294,872	-				-0.5
1,294,872	-				+1.0
1,294,872	-				-0.1
1,294,873	+				+0.4
1,294,874	-				-0.6
1,294,874	-				-1.4
1,294,878	+				-0.7
1,294,878	+				+0.3
1,294,879	-				-0.4
1,294,879	-				+0.1
1,294,883	+				-0.5
1,294,893	-				-0.7
1,294,919	-				-0.3
1,294,919	-				-0.3
1,294,921	+				-0.3
1,294,921	+				+0.8
1,294,923	+				+0.1
1,294,924	-				-1.6
1,294,924	-				-0.4
1,294,998	+		Echvi_1132	0.28	+0.5
1,294,999	-		Echvi_1132	0.29	-0.1
1,295,010	+		Echvi_1132	0.32	-1.2
1,295,011	-		Echvi_1132	0.33	-0.7
1,295,011	-		Echvi_1132	0.33	+0.0
1,295,011	-		Echvi_1132	0.33	+1.1
1,295,014	+		Echvi_1132	0.34	-0.6
1,295,015	-		Echvi_1132	0.34	-1.3
1,295,113	-		Echvi_1132	0.66	+0.5
1,295,140	+		Echvi_1132	0.74	+0.3
1,295,141	-		Echvi_1132	0.75	+1.3
1,295,141	-		Echvi_1132	0.75	+0.6
1,295,141	-		Echvi_1132	0.75	+0.3
1,295,141	-		Echvi_1132	0.75	+0.6
1,295,141	-		Echvi_1132	0.75	+2.7
1,295,141	-		Echvi_1132	0.75	-0.5
1,295,141	-		Echvi_1132	0.75	-0.1
1,295,141	-		Echvi_1132	0.75	-0.7
1,295,141	-		Echvi_1132	0.75	+0.0
1,295,160	+		Echvi_1132	0.81	-0.5
1,295,166	-		Echvi_1132	0.83	+0.1
1,295,381	+		Echvi_1133	0.19	-0.7
1,295,382	-		Echvi_1133	0.20	-1.5
1,295,491	+		Echvi_1133	0.41	-0.9
1,295,571	-		Echvi_1133	0.57	-1.3
1,295,579	+		Echvi_1133	0.58	+0.5
1,295,580	-		Echvi_1133	0.58	-0.3
1,295,599	-		Echvi_1133	0.62	-0.9
1,295,603	-		Echvi_1133	0.63	-0.1
1,295,603	-		Echvi_1133	0.63	-0.1
1,295,661	+		Echvi_1133	0.74	-1.1
1,295,661	+		Echvi_1133	0.74	-0.5
1,295,743	+				+0.4
1,295,743	+				-1.0
1,295,744	-				+0.6
1,295,744	-				-0.0
1,295,757	-				-0.5
1,295,776	-				-0.1
1,295,776	-				-0.6
1,295,797	-				+0.4
1,295,808	-				+1.1
1,295,808	-				-1.7
1,295,834	+				-0.2
1,295,834	+				-0.1
1,295,834	+				+0.4
1,295,947	+				+0.2
1,295,999	+				-0.1
1,296,020	+				-0.3
1,296,090	+		Echvi_1134	0.10	+1.0
1,296,093	+		Echvi_1134	0.11	-0.1
1,296,093	+		Echvi_1134	0.11	-0.4
1,296,098	+		Echvi_1134	0.11	+0.5
1,296,120	+		Echvi_1134	0.14	+1.5
1,296,120	+		Echvi_1134	0.14	+0.5
1,296,133	+		Echvi_1134	0.16	-0.4
1,296,133	+		Echvi_1134	0.16	+0.2
1,296,211	+		Echvi_1134	0.26	+1.3
1,296,212	-		Echvi_1134	0.26	+0.3
1,296,213	+		Echvi_1134	0.27	+1.0
1,296,213	+		Echvi_1134	0.27	-1.1
1,296,213	+		Echvi_1134	0.27	-1.1
1,296,218	+		Echvi_1134	0.27	+1.0
1,296,218	+		Echvi_1134	0.27	-0.1
1,296,219	-		Echvi_1134	0.27	-0.2
1,296,219	-		Echvi_1134	0.27	+0.2
1,296,225	+		Echvi_1134	0.28	-0.2
1,296,333	+		Echvi_1134	0.42	+0.9
1,296,333	+		Echvi_1134	0.42	-0.4
1,296,333	+		Echvi_1134	0.42	-0.4
1,296,333	+		Echvi_1134	0.42	+0.4
1,296,334	-		Echvi_1134	0.43	-1.8
1,296,334	-		Echvi_1134	0.43	-2.8
1,296,359	+		Echvi_1134	0.46	-0.1
1,296,360	-		Echvi_1134	0.46	+0.0
1,296,360	-		Echvi_1134	0.46	-0.0
1,296,417	+		Echvi_1134	0.54	+0.3
1,296,470	+		Echvi_1134	0.61	-1.2
1,296,470	+		Echvi_1134	0.61	-0.4
1,296,470	+		Echvi_1134	0.61	+0.5
1,296,470	+		Echvi_1134	0.61	+1.2
1,296,470	+		Echvi_1134	0.61	+0.9
1,296,470	+		Echvi_1134	0.61	-0.8
1,296,471	-		Echvi_1134	0.61	-0.1
1,296,471	-		Echvi_1134	0.61	-0.8
1,296,483	+		Echvi_1134	0.62	-0.3
1,296,544	-		Echvi_1134	0.71	-0.1
1,296,544	-		Echvi_1134	0.71	-0.8
1,296,558	+		Echvi_1134	0.72	-0.2
1,296,558	+		Echvi_1134	0.72	+0.2
1,296,614	+		Echvi_1134	0.80	+0.4
1,296,646	+		Echvi_1134	0.84	-0.3
1,296,646	+		Echvi_1134	0.84	-1.7
1,296,646	+		Echvi_1134	0.84	-0.0
1,296,647	-		Echvi_1134	0.84	-1.3
1,296,647	-		Echvi_1134	0.84	+0.8
1,296,647	-		Echvi_1134	0.84	-0.3
1,296,647	-		Echvi_1134	0.84	+0.1
1,296,648	+		Echvi_1134	0.84	+0.4
1,296,648	+		Echvi_1134	0.84	+0.2
1,296,649	-		Echvi_1134	0.84	+0.0
1,296,649	-		Echvi_1134	0.84	+0.7
1,296,649	-		Echvi_1134	0.84	-0.1
1,296,649	-		Echvi_1134	0.84	+0.7
1,296,649	-		Echvi_1134	0.84	+0.9
1,296,652	+		Echvi_1134	0.85	+0.3
1,296,653	-		Echvi_1134	0.85	+0.6
1,296,653	-		Echvi_1134	0.85	-0.2
1,296,653	-		Echvi_1134	0.85	-0.3
1,296,653	-		Echvi_1134	0.85	+0.0
1,296,776	+				-0.5
1,296,776	+				+0.1
1,296,777	-				+0.4
1,296,777	-				+0.7
1,296,782	+				+0.6