Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4654

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
5,571,351	-		Echvi_4653	0.69	+2.4
5,571,755	-				+0.6
5,571,856	+				-1.5
5,571,949	-				+0.8
5,572,204	+				-0.3
5,572,204	+				-1.5
5,572,212	+				+0.8
5,572,219	-				-1.0
5,572,394	-		Echvi_4654	0.26	-0.4
5,572,404	+		Echvi_4654	0.27	-0.8
5,572,440	+		Echvi_4654	0.31	-1.7
5,572,440	+		Echvi_4654	0.31	+1.8
5,572,441	-		Echvi_4654	0.31	+4.1
5,572,483	+		Echvi_4654	0.37	-0.1
5,572,483	+		Echvi_4654	0.37	-0.6
5,572,484	-		Echvi_4654	0.37	-2.3
5,572,609	+		Echvi_4654	0.52	+0.6
5,572,610	-		Echvi_4654	0.52	-0.5
5,572,677	+		Echvi_4654	0.61	+1.2
5,572,678	-		Echvi_4654	0.61	-1.0
5,572,682	-		Echvi_4654	0.61	+0.0
5,572,682	-		Echvi_4654	0.61	-1.2
5,572,732	+		Echvi_4654	0.67	-1.4
5,572,732	+		Echvi_4654	0.67	-0.2
5,572,732	+		Echvi_4654	0.67	+0.2
5,572,732	+		Echvi_4654	0.67	-1.2
5,572,733	-		Echvi_4654	0.68	+0.4
5,572,733	-		Echvi_4654	0.68	-0.4
5,572,733	-		Echvi_4654	0.68	-1.8
5,572,733	-		Echvi_4654	0.68	+0.1
5,572,733	-		Echvi_4654	0.68	-1.0
5,572,751	-		Echvi_4654	0.70	+2.2
5,572,772	+		Echvi_4654	0.72	-0.2
5,572,773	-		Echvi_4654	0.72	-1.7
5,572,812	+		Echvi_4654	0.77	-0.5
5,572,813	-		Echvi_4654	0.77	-2.1
5,572,834	+		Echvi_4654	0.80	+0.5
5,572,834	+		Echvi_4654	0.80	+0.8
5,572,897	-		Echvi_4654	0.88	-0.7
5,572,955	+				-0.3
5,572,994	+				+1.0
5,572,994	+				-0.9
5,573,008	+				-0.6
5,573,038	+				-0.5
5,573,039	-				-0.1
5,573,039	-				+0.3
5,573,039	-				-0.2
5,573,039	-				+1.2
5,573,058	+				+0.2
5,573,102	+				+0.8
5,573,102	+				+0.6
5,573,103	-				-0.0
5,573,149	+				-0.8
5,573,149	+				-0.1
5,573,150	-				+0.2
5,573,150	-				+2.5
5,573,255	+				-1.5
5,573,294	+				-0.2
5,573,295	-				-2.0
5,573,300	+				-1.7
5,573,325	+				+0.3
5,573,325	+				-0.7
5,573,326	-				+0.6
5,573,326	-				-1.6
5,573,328	-				-0.9
5,573,408	+				+0.0
5,573,408	+				-0.6
5,573,409	-				-0.1
5,573,414	-				-0.9
5,573,414	-				+0.2
5,573,420	+				+0.6
5,573,420	+				-1.0
5,573,421	-				+1.4
5,573,421	-				+0.2
5,573,421	-				-1.7
5,573,421	-				-1.2
5,573,424	+				+1.8
5,573,424	+				-0.5
5,573,424	+				-1.0
5,573,460	-				+1.1
5,573,468	+				+0.7
5,573,468	+				-0.5
5,573,471	+				+0.5
5,573,472	-				+0.6
5,573,472	-				+0.4
5,573,472	-				-1.2
5,573,475	-				+1.8
5,573,475	-				-0.1
5,573,475	-				-0.6
5,573,478	-				+1.1
5,573,499	+				+0.0
5,573,500	-				+1.8
5,573,500	-				+1.0
5,573,500	-				-0.2
5,573,512	+				-1.8
5,573,846	+				-1.4
5,573,847	-				+0.0
5,573,896	+				-0.2