Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4357

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
5,212,648	-				+1.3
5,212,799	+		Echvi_4356	0.12	+0.4
5,212,799	+		Echvi_4356	0.12	-0.3
5,212,799	+		Echvi_4356	0.12	+1.0
5,212,799	+		Echvi_4356	0.12	+0.4
5,213,146	+		Echvi_4356	0.52	+1.4
5,213,147	-		Echvi_4356	0.52	+0.1
5,213,150	+		Echvi_4356	0.52	+0.3
5,213,150	+		Echvi_4356	0.52	+1.8
5,213,150	+		Echvi_4356	0.52	+0.5
5,213,151	-		Echvi_4356	0.52	-1.8
5,213,192	+		Echvi_4356	0.57	+2.8
5,213,420	+		Echvi_4356	0.83	-0.2
5,213,558	+				+0.1
5,213,558	+				-0.2
5,213,843	-		Echvi_4357	0.22	-1.2
5,213,909	-		Echvi_4357	0.28	+0.7
5,214,226	-		Echvi_4357	0.54	+0.5
5,214,539	-		Echvi_4357	0.80	+2.0
5,214,596	-		Echvi_4357	0.84	-1.0
5,214,824	-				-2.6
5,214,959	+				-0.2
5,215,065	+				-1.7
5,215,066	-				-0.7
5,215,068	+				+1.2
5,215,202	+		Echvi_4358	0.20	-0.9
5,215,202	+		Echvi_4358	0.20	-0.5
5,215,336	+		Echvi_4358	0.41	+0.6
5,215,336	+		Echvi_4358	0.41	+0.7
5,215,336	+		Echvi_4358	0.41	+1.1
5,215,553	-		Echvi_4358	0.77	+0.9
5,215,553	-		Echvi_4358	0.77	+1.0
5,215,617	+		Echvi_4358	0.87	+0.3
5,215,617	+		Echvi_4358	0.87	+0.2
5,215,618	-		Echvi_4358	0.87	+3.0
5,215,674	+				-0.3
5,215,674	+				+0.8
5,215,674	+				+0.5
5,215,675	-				+0.5
5,215,697	+				-0.5
5,215,704	+				-1.6
5,215,743	+				+1.3