Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4176

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
4,991,656	-		Echvi_4175	0.19	-0.5
4,991,696	+		Echvi_4175	0.22	-0.2
4,991,697	-		Echvi_4175	0.23	+1.2
4,991,699	+		Echvi_4175	0.23	+1.8
4,991,700	-		Echvi_4175	0.23	+0.2
4,991,834	+		Echvi_4175	0.35	+0.6
4,991,834	+		Echvi_4175	0.35	+0.4
4,991,835	-		Echvi_4175	0.35	-0.7
4,991,853	+		Echvi_4175	0.37	-1.0
4,991,853	+		Echvi_4175	0.37	+0.9
4,991,909	-		Echvi_4175	0.42	+1.4
4,991,912	-		Echvi_4175	0.43	-0.1
4,991,958	+		Echvi_4175	0.47	-0.2
4,991,959	-		Echvi_4175	0.47	+0.8
4,991,959	-		Echvi_4175	0.47	-0.2
4,991,963	-		Echvi_4175	0.48	+1.3
4,991,963	-		Echvi_4175	0.48	+1.8
4,991,975	-		Echvi_4175	0.49	+0.1
4,991,977	-		Echvi_4175	0.49	-1.7
4,992,043	+		Echvi_4175	0.55	-1.2
4,992,054	+		Echvi_4175	0.56	-0.6
4,992,156	+		Echvi_4175	0.66	-0.9
4,992,177	-		Echvi_4175	0.68	-2.6
4,992,178	+		Echvi_4175	0.68	-0.2
4,992,178	+		Echvi_4175	0.68	+0.3
4,992,179	-		Echvi_4175	0.68	-0.5
4,992,179	-		Echvi_4175	0.68	-1.3
4,992,315	-		Echvi_4175	0.81	-0.5
4,992,377	+		Echvi_4175	0.87	-0.7
4,992,377	+		Echvi_4175	0.87	-0.5
4,992,378	-		Echvi_4175	0.87	-0.1
4,992,378	-		Echvi_4175	0.87	-2.3
4,992,378	-		Echvi_4175	0.87	-0.7
4,992,401	-		Echvi_4175	0.89	+0.1
4,992,418	+				+0.9
4,992,419	-				-0.3
4,992,439	+				-0.7
4,992,440	-				-0.7
4,992,478	+				+0.2
4,992,479	-				+1.5
4,992,480	+				-0.9
4,992,480	+				+1.4
4,992,484	+				-0.7
4,992,485	-				+0.1
4,992,486	+				+0.9
4,992,486	+				-0.5
4,992,486	+				-0.4
4,992,486	+				+0.1
4,992,486	+				+1.1
4,992,487	-				+0.4
4,992,487	-				-0.5
4,992,487	-				+0.1
4,992,487	-				-0.6
4,992,487	-				-2.3
4,992,487	-				-0.6
4,992,532	+				-1.0
4,992,570	+				+0.3
4,992,570	+				-0.3
4,992,572	+				-0.2
4,992,572	+				-1.5
4,992,576	+				-0.8
4,992,593	+				-2.2
4,992,594	-				-0.5
4,992,620	-				+0.1
4,992,688	+				-1.7
4,992,696	+				+0.4
4,992,696	+				+1.0
4,992,708	+		Echvi_4176	0.11	+0.1
4,992,709	-		Echvi_4176	0.11	-0.8
4,992,750	+		Echvi_4176	0.17	-2.0
4,992,780	+		Echvi_4176	0.21	-0.6
4,992,833	-		Echvi_4176	0.29	-0.2
4,992,887	+		Echvi_4176	0.37	-1.6
4,992,887	+		Echvi_4176	0.37	+0.6
4,992,914	-		Echvi_4176	0.41	-2.1
4,993,025	+		Echvi_4176	0.57	+0.2
4,993,025	+		Echvi_4176	0.57	-2.2
4,993,108	+		Echvi_4176	0.69	+2.8
4,993,114	+		Echvi_4176	0.69	-0.2
4,993,206	+		Echvi_4176	0.83	-1.7
4,993,291	-				-0.6
4,993,296	+				+0.5
4,993,297	-				-0.6
4,993,305	+				-0.3
4,993,305	+				-1.3
4,993,306	-				+0.8
4,993,306	-				+0.1
4,993,309	-				+1.2
4,993,331	+				-2.3
4,993,357	-				-0.1
4,993,385	+				+0.8
4,993,407	-				+0.4
4,993,471	+		Echvi_4177	0.15	+1.0
4,993,472	-		Echvi_4177	0.15	+0.8
4,993,627	+		Echvi_4177	0.31	-0.4
4,993,628	-		Echvi_4177	0.31	+0.7
4,993,744	+		Echvi_4177	0.43	+0.8
4,993,744	+		Echvi_4177	0.43	-0.7
4,993,880	-		Echvi_4177	0.57	-0.2
4,993,880	-		Echvi_4177	0.57	-0.3
4,993,880	-		Echvi_4177	0.57	-0.4
4,993,880	-		Echvi_4177	0.57	-0.3
4,993,884	-		Echvi_4177	0.57	+0.3
4,993,884	-		Echvi_4177	0.57	-0.7
4,993,884	-		Echvi_4177	0.57	+0.8
4,993,936	+		Echvi_4177	0.62	-0.4
4,993,937	-		Echvi_4177	0.62	-0.5
4,993,937	-		Echvi_4177	0.62	-1.3
4,993,956	-		Echvi_4177	0.64	+0.8
4,993,956	-		Echvi_4177	0.64	-0.6
4,993,957	+		Echvi_4177	0.65	-0.0
4,994,123	-		Echvi_4177	0.81	+1.0
4,994,126	-		Echvi_4177	0.82	+0.6
4,994,136	+		Echvi_4177	0.83	-0.4
4,994,320	+				+0.0
4,994,321	-				+1.0
4,994,321	-				-0.1
4,994,321	-				-0.5
4,994,321	-				+0.7
4,994,321	-				-1.5
4,994,322	+				+0.7
4,994,323	-				-1.0