Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4145

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
4,960,718	+				-0.5
4,960,721	+				-1.0
4,960,858	+		Echvi_4143	0.42	+0.2
4,960,858	+		Echvi_4143	0.42	-0.5
4,960,859	-		Echvi_4143	0.43	-0.6
4,960,959	+		Echvi_4143	0.73	-0.6
4,960,959	+		Echvi_4143	0.73	-1.7
4,960,960	-		Echvi_4143	0.73	+0.3
4,961,001	+		Echvi_4143	0.86	+0.6
4,961,002	-		Echvi_4143	0.86	+0.5
4,961,013	+		Echvi_4143	0.90	-1.0
4,961,013	+		Echvi_4143	0.90	-2.0
4,961,014	-				+0.2
4,961,014	-				-0.3
4,961,014	-				+0.9
4,961,046	+				+2.6
4,961,047	-				+1.1
4,961,106	-				-0.1
4,961,126	-				+1.0
4,961,166	+		Echvi_4144	0.16	-2.0
4,961,237	-		Echvi_4144	0.42	+0.2
4,961,237	-		Echvi_4144	0.42	-0.5
4,961,237	-		Echvi_4144	0.42	-1.4
4,961,320	-		Echvi_4144	0.73	-1.2
4,961,328	+		Echvi_4144	0.76	-0.5
4,961,329	-		Echvi_4144	0.76	-0.2
4,961,334	-		Echvi_4144	0.78	+0.3
4,961,373	+				-0.7
4,961,374	-				+0.6
4,961,462	+				-0.5
4,961,462	+				-0.7
4,961,462	+				+0.5
4,961,467	+				-1.1
4,961,493	-				-1.0
4,961,493	-				+0.1
4,961,569	+				-0.5
4,961,646	+				-0.2
4,961,646	+				-0.1
4,961,646	+				-1.7
4,961,647	-		Echvi_4145	0.10	-1.5
4,961,655	+		Echvi_4145	0.12	-0.8
4,961,676	-		Echvi_4145	0.18	-0.2
4,961,714	+		Echvi_4145	0.28	+0.3
4,961,777	+		Echvi_4145	0.46	-0.7
4,961,814	+		Echvi_4145	0.56	-0.2
4,961,819	-		Echvi_4145	0.57	-0.3
4,961,934	+		Echvi_4145	0.89	-1.1
4,961,946	+				-1.7
4,961,947	-				-0.4
4,962,061	-				-1.6
4,962,061	-				-0.3
4,962,089	+				+0.2
4,962,095	+				-1.7
4,962,095	+				-1.6
4,962,096	-				-0.7
4,962,096	-				+0.8
4,962,110	-				-0.2
4,962,110	-				-1.6
4,962,110	-				-0.7
4,962,118	+				+0.3
4,962,186	+				+0.5
4,962,187	-		Echvi_4146	0.10	+0.2
4,962,213	+		Echvi_4146	0.12	+1.3
4,962,230	+		Echvi_4146	0.13	+1.8
4,962,230	+		Echvi_4146	0.13	-0.2
4,962,230	+		Echvi_4146	0.13	-0.4
4,962,236	+		Echvi_4146	0.14	-0.2
4,962,236	+		Echvi_4146	0.14	+0.0
4,962,237	-		Echvi_4146	0.14	+1.2
4,962,237	-		Echvi_4146	0.14	+0.3
4,962,237	-		Echvi_4146	0.14	+0.4
4,962,237	-		Echvi_4146	0.14	+1.2
4,962,249	+		Echvi_4146	0.15	-0.2
4,962,266	+		Echvi_4146	0.16	-0.8
4,962,267	-		Echvi_4146	0.16	+1.8
4,962,304	+		Echvi_4146	0.19	-1.0
4,962,304	+		Echvi_4146	0.19	+4.4
4,962,310	+		Echvi_4146	0.19	-1.7
4,962,310	+		Echvi_4146	0.19	-2.4
4,962,310	+		Echvi_4146	0.19	+0.5
4,962,311	-		Echvi_4146	0.19	-0.7
4,962,311	-		Echvi_4146	0.19	+0.3
4,962,311	-		Echvi_4146	0.19	-0.0
4,962,311	-		Echvi_4146	0.19	+1.0
4,962,336	+		Echvi_4146	0.21	-1.3
4,962,336	+		Echvi_4146	0.21	+0.3
4,962,341	-		Echvi_4146	0.22	-0.7
4,962,341	-		Echvi_4146	0.22	+0.7
4,962,341	-		Echvi_4146	0.22	+1.8
4,962,341	-		Echvi_4146	0.22	+0.7
4,962,341	-		Echvi_4146	0.22	-0.5
4,962,350	-		Echvi_4146	0.22	-0.4
4,962,359	-		Echvi_4146	0.23	-2.3
4,962,387	+		Echvi_4146	0.25	-0.9
4,962,389	+		Echvi_4146	0.25	+0.2
4,962,417	+		Echvi_4146	0.27	-0.3
4,962,477	+		Echvi_4146	0.32	-0.4
4,962,477	+		Echvi_4146	0.32	+0.3
4,962,477	+		Echvi_4146	0.32	-0.2
4,962,477	+		Echvi_4146	0.32	+0.1
4,962,480	+		Echvi_4146	0.32	-0.2
4,962,481	-		Echvi_4146	0.32	+0.5
4,962,481	-		Echvi_4146	0.32	-2.5
4,962,483	+		Echvi_4146	0.32	+0.3
4,962,484	-		Echvi_4146	0.32	+0.3
4,962,503	+		Echvi_4146	0.34	+0.3
4,962,503	+		Echvi_4146	0.34	-0.1
4,962,503	+		Echvi_4146	0.34	-1.1
4,962,504	-		Echvi_4146	0.34	-1.2
4,962,504	-		Echvi_4146	0.34	+1.1
4,962,504	-		Echvi_4146	0.34	-0.2
4,962,504	-		Echvi_4146	0.34	-0.2
4,962,505	+		Echvi_4146	0.34	+0.7
4,962,505	+		Echvi_4146	0.34	-1.6
4,962,506	-		Echvi_4146	0.34	+0.3
4,962,506	-		Echvi_4146	0.34	-0.3
4,962,506	-		Echvi_4146	0.34	+0.1
4,962,510	+		Echvi_4146	0.34	-1.4
4,962,510	+		Echvi_4146	0.34	-0.4
4,962,510	+		Echvi_4146	0.34	-0.9
4,962,517	-		Echvi_4146	0.35	-0.3
4,962,533	+		Echvi_4146	0.36	+0.2
4,962,533	+		Echvi_4146	0.36	+0.1
4,962,533	+		Echvi_4146	0.36	-0.5
4,962,534	-		Echvi_4146	0.36	+0.1
4,962,629	-		Echvi_4146	0.43	+0.6
4,962,679	+		Echvi_4146	0.47	-1.1
4,962,680	-		Echvi_4146	0.47	+0.1
4,962,682	-		Echvi_4146	0.47	+1.2
4,962,730	+		Echvi_4146	0.50	-0.7
4,962,730	+		Echvi_4146	0.50	-0.0
4,962,730	+		Echvi_4146	0.50	-0.8
4,962,731	-		Echvi_4146	0.51	+2.4
4,962,738	+		Echvi_4146	0.51	+1.5
4,962,773	-		Echvi_4146	0.54	-0.5
4,962,773	-		Echvi_4146	0.54	+0.4
4,962,777	+		Echvi_4146	0.54	-0.2
4,962,778	-		Echvi_4146	0.54	-0.4
4,962,822	+		Echvi_4146	0.57	-0.2
4,962,825	+		Echvi_4146	0.58	-0.3
4,962,873	+		Echvi_4146	0.61	-0.0
4,962,874	-		Echvi_4146	0.61	-0.2
4,962,874	-		Echvi_4146	0.61	-0.1
4,962,875	+		Echvi_4146	0.61	-0.3
4,962,875	+		Echvi_4146	0.61	-0.7
4,962,876	-		Echvi_4146	0.61	+1.4
4,962,897	+		Echvi_4146	0.63	-1.7
4,962,897	+		Echvi_4146	0.63	+2.3
4,962,897	+		Echvi_4146	0.63	-0.0