Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3768

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
4,490,168	-				+0.1
4,490,168	-				+0.4
4,490,168	-				+1.1
4,490,169	+				-1.2
4,490,169	+				+1.5
4,490,169	+				-1.1
4,490,170	-				-0.7
4,490,170	-				-0.6
4,490,170	-				+1.9
4,490,170	-				+1.0
4,490,170	-				-0.3
4,490,170	-				+0.4
4,490,177	+				-1.3
4,490,177	+				-0.6
4,490,178	-				+1.1
4,490,535	+		Echvi_3767	0.40	+1.3
4,490,542	+		Echvi_3767	0.40	+2.0
4,490,542	+		Echvi_3767	0.40	+0.1
4,490,542	+		Echvi_3767	0.40	-0.6
4,490,543	-		Echvi_3767	0.40	+0.5
4,490,543	-		Echvi_3767	0.40	-0.1
4,490,543	-		Echvi_3767	0.40	-0.6
4,490,543	-		Echvi_3767	0.40	+0.5
4,490,606	+		Echvi_3767	0.47	-0.2
4,490,612	-		Echvi_3767	0.47	+1.5
4,490,612	-				+0.9
4,490,672	-		Echvi_3767	0.53	-1.0
4,490,672	-		Echvi_3767	0.53	+0.8
4,490,760	+		Echvi_3767	0.61	+0.5
4,490,761	-		Echvi_3767	0.62	+0.4
4,490,764	-		Echvi_3767	0.62	-0.1
4,490,814	-		Echvi_3767	0.67	-1.8
4,490,851	+		Echvi_3767	0.70	-0.3
4,490,852	-		Echvi_3767	0.70	+1.0
4,490,852	-		Echvi_3767	0.70	+0.4
4,490,855	+		Echvi_3767	0.71	-1.6
4,490,856	-		Echvi_3767	0.71	-0.8
4,490,856	-		Echvi_3767	0.71	-0.6
4,490,861	+		Echvi_3767	0.71	+0.8
4,490,861	+		Echvi_3767	0.71	-0.6
4,490,861	+		Echvi_3767	0.71	-0.1
4,490,862	-		Echvi_3767	0.71	-0.9
4,490,862	-		Echvi_3767	0.71	-1.1
4,490,885	-		Echvi_3767	0.74	+0.8
4,490,916	+		Echvi_3767	0.77	+0.2
4,490,917	-		Echvi_3767	0.77	-0.4
4,490,920	+		Echvi_3767	0.77	-0.5
4,490,987	+		Echvi_3767	0.83	-1.0
4,490,987	+		Echvi_3767	0.83	+0.1
4,490,988	-		Echvi_3767	0.83	+0.1
4,491,059	+				+0.5
4,491,135	+				-0.6
4,491,137	+				-1.9
4,491,137	+				-0.4
4,491,138	-				+0.2
4,491,158	+				+0.0
4,491,158	+				+1.2
4,491,164	+				-0.1
4,491,164	+				+0.8
4,491,165	-				+0.5
4,491,165	-				-0.6
4,491,170	-				-0.2
4,491,181	-				+0.0
4,491,188	+				+0.3
4,491,188	+				-1.1
4,491,304	+		Echvi_3768	0.11	-0.4
4,491,406	-		Echvi_3768	0.18	-0.5
4,491,738	+		Echvi_3768	0.43	-0.7
4,491,754	+		Echvi_3768	0.45	-0.4
4,491,756	+		Echvi_3768	0.45	+0.3
4,491,757	-		Echvi_3768	0.45	+0.2
4,491,888	+		Echvi_3768	0.55	-0.4
4,491,909	-		Echvi_3768	0.56	-0.1
4,491,976	-		Echvi_3768	0.61	+0.1
4,492,027	+		Echvi_3768	0.65	+0.6
4,492,166	+		Echvi_3768	0.76	-1.0
4,492,167	-		Echvi_3768	0.76	+1.3
4,492,328	-		Echvi_3768	0.88	-0.8
4,492,328	-		Echvi_3768	0.88	-2.2
4,492,380	-				+0.6
4,492,417	+				-0.2
4,492,417	+				-1.8
4,492,418	-				-0.4
4,492,418	-				-0.1
4,492,478	+				+0.0
4,492,479	-				-1.8
4,492,508	-				+1.6
4,492,516	+				+0.1
4,492,517	-				-0.4
4,492,517	-				-0.0
4,492,517	-				+2.2
4,492,523	+				-1.0
4,492,532	-				+0.3
4,492,532	-				+0.3
4,492,532	-				+1.9
4,492,675	+				-0.7
4,492,676	-				+0.5
4,492,676	-				+1.1
4,492,682	+				-1.7
4,492,682	+				-0.9
4,492,683	-				+0.4
4,492,692	+				+0.4
4,492,829	+		Echvi_3769	0.11	+0.7
4,492,829	+		Echvi_3769	0.11	+1.4
4,492,829	+		Echvi_3769	0.11	-0.7
4,492,830	-		Echvi_3769	0.11	+1.0
4,492,831	+		Echvi_3769	0.11	+1.6
4,492,832	-		Echvi_3769	0.12	-0.1
4,492,832	-		Echvi_3769	0.12	-0.7
4,492,832	-		Echvi_3769	0.12	-1.7
4,492,832	-		Echvi_3769	0.12	+0.1
4,492,870	+		Echvi_3769	0.15	-1.6
4,492,895	+		Echvi_3769	0.17	-0.2
4,492,895	+		Echvi_3769	0.17	-1.2
4,492,895	+		Echvi_3769	0.17	+2.9
4,492,896	-		Echvi_3769	0.17	+0.6
4,492,897	+		Echvi_3769	0.17	-0.0
4,492,898	-		Echvi_3769	0.17	+1.1
4,493,006	+		Echvi_3769	0.27	+0.1
4,493,006	+		Echvi_3769	0.27	+0.3
4,493,006	+		Echvi_3769	0.27	+0.8
4,493,007	-		Echvi_3769	0.27	+0.9
4,493,007	-		Echvi_3769	0.27	-0.9
4,493,009	+		Echvi_3769	0.27	+0.8
4,493,010	-		Echvi_3769	0.27	+0.2
4,493,010	-		Echvi_3769	0.27	+0.7
4,493,010	-		Echvi_3769	0.27	-1.4
4,493,014	+		Echvi_3769	0.27	-1.4
4,493,014	+		Echvi_3769	0.27	-0.7
4,493,015	-		Echvi_3769	0.27	-0.7
4,493,107	-		Echvi_3769	0.35	+0.9
4,493,156	+		Echvi_3769	0.39	+0.1
4,493,156	+		Echvi_3769	0.39	-1.8
4,493,157	-		Echvi_3769	0.40	-0.6
4,493,176	+		Echvi_3769	0.41	-0.1
4,493,180	+		Echvi_3769	0.42	-2.5
4,493,181	-		Echvi_3769	0.42	-1.0
4,493,223	+		Echvi_3769	0.45	+0.5
4,493,223	+		Echvi_3769	0.45	+1.5
4,493,223	+		Echvi_3769	0.45	+0.0
4,493,225	+		Echvi_3769	0.45	-0.7
4,493,225	+		Echvi_3769	0.45	+0.1
4,493,226	-		Echvi_3769	0.45	+0.8
4,493,269	-		Echvi_3769	0.49	+0.9