Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3497

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
4,143,696	-		Echvi_3496	0.71	+0.4
4,143,696	-		Echvi_3496	0.71	-0.0
4,143,705	-		Echvi_3496	0.71	+0.4
4,143,734	-		Echvi_3496	0.73	-1.3
4,143,887	+		Echvi_3496	0.81	+1.0
4,143,887	+		Echvi_3496	0.81	+1.2
4,143,888	-		Echvi_3496	0.81	-1.3
4,143,888	-		Echvi_3496	0.81	+1.2
4,143,888	-		Echvi_3496	0.81	-0.1
4,143,995	-		Echvi_3496	0.87	-0.1
4,144,083	+				-1.1
4,144,088	+				-0.2
4,144,089	-				+0.3
4,144,145	+				-0.0
4,144,147	+				+1.5
4,144,147	+				-1.6
4,144,147	+				+0.4
4,144,147	+				+0.5
4,144,147	+				+0.5
4,144,148	-				-0.6
4,144,148	-				-0.1
4,144,180	+				-0.0
4,144,241	-				+0.9
4,144,241	-				-1.3
4,144,259	+				-0.1
4,144,289	-				-0.1
4,144,316	+				+1.0
4,144,316	+				-0.5
4,144,317	-				+0.4
4,144,337	-				+0.3
4,144,409	-				-0.5
4,144,425	-				+0.2
4,144,592	+				+0.0
4,144,620	+				+0.1
4,144,663	+				-0.8
4,144,663	+				-0.6
4,144,663	+				-0.6
4,144,664	-				+1.6
4,144,695	+				+0.4
4,144,695	+				+0.7
4,144,695	+				+0.7
4,144,705	-				+0.1
4,144,729	-				-0.2
4,144,745	+				-0.6
4,144,745	+				-0.2
4,144,745	+				+0.7
4,144,746	-				-1.2
4,144,746	-				+1.0
4,144,746	-				-0.4
4,144,746	-				-0.1
4,144,747	+				-0.4
4,144,747	+				+1.0
4,144,795	+				+0.5
4,144,827	-				+1.9
4,144,827	-				-1.1
4,144,857	+		Echvi_3497	0.10	+1.1
4,144,897	+		Echvi_3497	0.13	-0.3
4,145,015	-		Echvi_3497	0.20	-1.8
4,145,090	+		Echvi_3497	0.25	-0.7
4,145,097	+		Echvi_3497	0.25	-0.6
4,145,108	-		Echvi_3497	0.26	+0.3
4,145,163	+		Echvi_3497	0.29	+0.4
4,145,185	+		Echvi_3497	0.31	-0.1
4,145,185	+		Echvi_3497	0.31	+0.5
4,145,186	-		Echvi_3497	0.31	-0.5
4,145,187	+		Echvi_3497	0.31	-0.3
4,145,188	-		Echvi_3497	0.31	-0.1
4,145,188	-		Echvi_3497	0.31	-1.7
4,145,221	+		Echvi_3497	0.33	-0.2
4,145,222	-		Echvi_3497	0.33	-0.6
4,145,222	-		Echvi_3497	0.33	-1.9
4,145,322	+		Echvi_3497	0.40	-1.2
4,145,323	-		Echvi_3497	0.40	-0.8
4,145,323	-		Echvi_3497	0.40	-0.5
4,145,393	+		Echvi_3497	0.44	+0.7
4,145,461	+		Echvi_3497	0.48	+0.7
4,145,543	-		Echvi_3497	0.53	+0.6
4,145,544	+		Echvi_3497	0.54	-0.0
4,145,574	+		Echvi_3497	0.55	-0.6
4,145,640	+		Echvi_3497	0.60	-1.5
4,145,640	+		Echvi_3497	0.60	-2.0
4,145,640	+		Echvi_3497	0.60	+0.9
4,145,641	-		Echvi_3497	0.60	+0.1
4,145,645	+		Echvi_3497	0.60	-0.2
4,145,645	+		Echvi_3497	0.60	-1.1
4,145,646	-		Echvi_3497	0.60	-0.1
4,145,646	-		Echvi_3497	0.60	-0.2
4,145,646	-		Echvi_3497	0.60	-1.0
4,145,646	-		Echvi_3497	0.60	-0.2
4,145,647	+		Echvi_3497	0.60	+0.1
4,145,775	+		Echvi_3497	0.68	-0.1
4,145,776	-		Echvi_3497	0.68	-1.5
4,145,779	+		Echvi_3497	0.68	-1.9
4,145,959	-		Echvi_3497	0.80	-0.1
4,146,037	+		Echvi_3497	0.85	+0.6
4,146,084	+		Echvi_3497	0.88	-0.1
4,146,084	+				+1.9
4,146,084	+		Echvi_3497	0.88	-1.3
4,146,085	-		Echvi_3497	0.88	-1.5
4,146,085	-		Echvi_3497	0.88	+1.5
4,146,086	+		Echvi_3497	0.88	+1.9
4,146,086	+		Echvi_3497	0.88	-1.7
4,146,086	+		Echvi_3497	0.88	-0.1
4,146,087	-		Echvi_3497	0.88	-0.9
4,146,124	+				+1.0
4,146,125	-				-0.9
4,146,125	-				+0.4
4,146,125	-				-2.0
4,146,177	-				+0.5
4,146,198	+				+1.9
4,146,198	+				-0.6
4,146,233	+				+0.1
4,146,234	-				-0.3
4,146,234	-				-0.2
4,146,243	+				-0.2
4,146,243	+				+0.0
4,146,256	+				+0.9
4,146,257	-				-1.1
4,146,257	-				+3.9
4,146,257	-				-0.5
4,146,257	-				+0.2
4,146,257	-				+1.1
4,146,274	-				-1.2
4,146,274	-				+0.1
4,146,308	+				-1.9
4,146,309	-				+0.4
4,146,309	-				-2.0
4,146,310	+				+0.5
4,146,310	+				+0.2
4,146,361	-				+1.2
4,146,363	+				+1.6
4,146,363	+				-0.3
4,146,363	+				+0.4
4,146,364	-				-0.5
4,146,364	-				+1.2
4,146,524	+		Echvi_3498	0.66	+1.3
4,146,527	+		Echvi_3498	0.68	+0.1
4,146,536	+		Echvi_3498	0.75	-0.1
4,146,537	-		Echvi_3498	0.76	-0.0
4,146,777	+				-2.8
4,146,778	-				+0.9
4,146,780	+				+0.3
4,146,786	+				-0.2
4,146,877	+				+0.6
4,146,878	-				+2.1
4,146,878	-				-2.9
4,146,878	-				-1.2
4,146,878	-				-1.3
4,146,897	-				-1.1
4,147,041	+				+0.3
4,147,082	+				+0.9
4,147,083	-				-1.8
4,147,103	-		Echvi_3500	0.10	-1.2
4,147,128	+		Echvi_3500	0.11	+0.3
4,147,128	+		Echvi_3500	0.11	+2.3
4,147,128	+		Echvi_3500	0.11	+0.2
4,147,184	+		Echvi_3500	0.13	+0.9
4,147,185	-		Echvi_3500	0.13	-0.3
4,147,185	-		Echvi_3500	0.13	-1.3
4,147,194	-		Echvi_3500	0.13	+1.3
4,147,194	-		Echvi_3500	0.13	-0.7