Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3460

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
4,095,136	-		Echvi_3459	0.89	+0.3
4,095,478	-				+1.8
4,095,486	+				+2.1
4,095,559	+				+0.4
4,095,615	+				+0.3
4,095,616	-				-0.1
4,095,751	-				-1.5
4,095,751	-				+0.6
4,095,804	-				-0.5
4,095,804	-				+0.6
4,095,807	+				+1.3
4,095,826	+				+0.9
4,095,827	-				+0.2
4,095,830	+				-0.6
4,095,830	+				-2.4
4,095,831	-				-0.2
4,095,851	-				+0.2
4,095,876	-				-2.0
4,095,940	+				+0.3
4,095,941	-				-0.8
4,095,941	-				+0.1
4,095,992	+				+0.3
4,096,027	+				+0.5
4,096,037	+				-1.3
4,096,040	-				+0.4
4,096,056	-				-2.0
4,096,062	+				-0.2
4,096,062	+				+0.8
4,096,064	+				-0.2
4,096,064	+				-0.5
4,096,064	+				+0.2
4,096,065	-				+0.0
4,096,069	-				-0.1
4,096,094	+				-1.4
4,096,095	-				+0.6
4,096,098	+				+0.7
4,096,098	+				+0.7
4,096,098	+				-0.7
4,096,098	+				-0.2
4,096,098	+				-0.6
4,096,098	+				+1.6
4,096,099	-				-0.6
4,096,110	+				+0.4
4,096,110	+				-0.8
4,096,174	-		Echvi_3460	0.14	+1.3
4,096,208	-		Echvi_3460	0.21	-1.9
4,096,225	+		Echvi_3460	0.25	-1.5
4,096,226	-		Echvi_3460	0.25	-1.1
4,096,230	+		Echvi_3460	0.26	-1.5
4,096,264	+		Echvi_3460	0.33	-0.7
4,096,264	+		Echvi_3460	0.33	-0.5
4,096,264	+		Echvi_3460	0.33	+0.3
4,096,264	+		Echvi_3460	0.33	-1.4
4,096,265	-		Echvi_3460	0.33	+0.3
4,096,265	-		Echvi_3460	0.33	-2.2
4,096,304	-		Echvi_3460	0.41	+1.8
4,096,304	-		Echvi_3460	0.41	-1.1
4,096,304	-		Echvi_3460	0.41	-0.0
4,096,306	+		Echvi_3460	0.41	-0.3
4,096,320	-		Echvi_3460	0.44	+0.5
4,096,322	+		Echvi_3460	0.45	-0.4
4,096,322	+		Echvi_3460	0.45	-1.4
4,096,323	-		Echvi_3460	0.45	+0.2
4,096,323	-		Echvi_3460	0.45	+0.1
4,096,323	-		Echvi_3460	0.45	-1.1
4,096,367	+		Echvi_3460	0.54	-0.9
4,096,387	+		Echvi_3460	0.58	-1.7
4,096,388	-		Echvi_3460	0.58	-0.6
4,096,432	+		Echvi_3460	0.67	-0.6
4,096,432	+		Echvi_3460	0.67	-0.6
4,096,440	-		Echvi_3460	0.68	+0.3
4,096,445	+		Echvi_3460	0.70	-0.2
4,096,474	+		Echvi_3460	0.75	-1.0
4,096,536	+		Echvi_3460	0.88	-0.1
4,096,590	+				+1.1
4,096,590	+				+0.3
4,096,591	-				-0.2
4,096,593	-				-2.0
4,096,593	-				+0.9
4,096,593	-				+1.4
4,096,602	+				+0.4
4,096,636	+				-1.7
4,096,755	+				-0.2
4,096,758	+				-0.7
4,096,758	+				-0.3
4,096,759	-				-0.3
4,096,759	-				-0.1
4,096,803	+				+1.0
4,096,803	+				+0.6
4,096,803	+				+1.1
4,096,803	+				-0.7
4,096,803	+				-0.5
4,096,803	+				+1.1
4,096,829	-				-0.7
4,096,889	-				-0.3
4,096,890	+				+1.6
4,096,897	+				-0.5
4,096,904	+				+0.3
4,096,934	-				-0.7
4,096,952	+				-0.5
4,096,974	+				-1.1
4,096,974	+				-1.7
4,096,975	-				+0.1
4,096,984	+				+0.3
4,096,985	-				-0.6
4,096,985	-				-1.0
4,096,985	-				+1.1
4,097,021	+				-0.6
4,097,022	-				+0.7
4,097,024	+				-2.1
4,097,025	-				+0.6
4,097,025	-				-1.7
4,097,043	-				-0.2
4,097,043	-				+0.1
4,097,119	+				-0.7
4,097,124	+				+1.6
4,097,125	-				-0.4
4,097,125	-				+0.0
4,097,152	+				-0.3
4,097,153	-				-0.0
4,097,178	-				+0.3
4,097,213	-				+0.1
4,097,267	-				-0.1
4,097,270	+				+1.5
4,097,270	+				+0.3
4,097,270	+				-0.3
4,097,271	-				-1.0
4,097,279	+				+2.3
4,097,279	+				+0.2
4,097,279	+				+0.5
4,097,294	+				+0.3
4,097,300	+				-0.3
4,097,300	+				-0.5
4,097,301	-				-0.9
4,097,343	-		Echvi_3461	0.10	-0.3
4,097,343	-		Echvi_3461	0.10	+1.3
4,097,347	+		Echvi_3461	0.10	+0.6
4,097,347	+		Echvi_3461	0.10	+0.2
4,097,347	+		Echvi_3461	0.10	+1.0
4,097,348	-		Echvi_3461	0.10	-0.7
4,097,351	+		Echvi_3461	0.10	+0.9
4,097,352	-		Echvi_3461	0.10	+0.1
4,097,358	-		Echvi_3461	0.10	-0.6
4,097,363	+		Echvi_3461	0.10	+0.3
4,097,379	+		Echvi_3461	0.11	-0.7
4,097,380	-		Echvi_3461	0.11	+0.5
4,097,380	-		Echvi_3461	0.11	-1.0
4,097,382	+		Echvi_3461	0.11	+0.8
4,097,383	-		Echvi_3461	0.11	+0.4
4,097,455	-		Echvi_3461	0.13	-0.8
4,097,466	-		Echvi_3461	0.13	-0.1
4,097,466	-		Echvi_3461	0.13	-1.0
4,097,466	-		Echvi_3461	0.13	+0.5
4,097,468	+		Echvi_3461	0.13	-0.5
4,097,502	+		Echvi_3461	0.14	-1.5
4,097,502	+		Echvi_3461	0.14	+1.7
4,097,503	-		Echvi_3461	0.14	+0.4
4,097,522	+		Echvi_3461	0.14	+0.7
4,097,522	+		Echvi_3461	0.14	-0.9
4,097,529	-		Echvi_3461	0.14	+0.3
4,097,589	-		Echvi_3461	0.16	+0.1