Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3396

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
4,012,287	-		Echvi_3395	0.70	-1.0
4,012,325	-		Echvi_3395	0.71	+0.7
4,012,325	-		Echvi_3395	0.71	-1.0
4,012,325	-		Echvi_3395	0.71	+0.6
4,012,355	+		Echvi_3395	0.72	-0.5
4,012,356	-		Echvi_3395	0.72	+1.0
4,012,356	-		Echvi_3395	0.72	+0.7
4,012,417	-		Echvi_3395	0.74	+0.2
4,012,566	-		Echvi_3395	0.79	+0.2
4,012,640	+		Echvi_3395	0.81	-0.3
4,012,641	-		Echvi_3395	0.81	+0.2
4,012,641	-		Echvi_3395	0.81	+0.7
4,012,642	+		Echvi_3395	0.81	-0.4
4,012,643	-		Echvi_3395	0.81	+0.2
4,012,773	+		Echvi_3395	0.85	-1.2
4,012,774	-		Echvi_3395	0.85	+0.1
4,012,774	-		Echvi_3395	0.85	+0.6
4,012,774	-		Echvi_3395	0.85	+0.5
4,012,774	-		Echvi_3395	0.85	-2.6
4,012,774	-		Echvi_3395	0.85	+1.3
4,012,774	-		Echvi_3395	0.85	+0.6
4,012,779	-		Echvi_3395	0.86	-0.2
4,012,779	-		Echvi_3395	0.86	-2.4
4,012,779	-		Echvi_3395	0.86	+1.2
4,012,781	-		Echvi_3395	0.86	+0.8
4,012,807	+		Echvi_3395	0.86	+0.0
4,012,807	+		Echvi_3395	0.86	-1.5
4,012,832	+		Echvi_3395	0.87	+0.4
4,012,833	-		Echvi_3395	0.87	-0.2
4,012,842	+		Echvi_3395	0.88	-0.3
4,012,843	-		Echvi_3395	0.88	+1.5
4,012,864	-		Echvi_3395	0.88	+1.8
4,013,034	-				+0.6
4,013,076	-				-0.6
4,013,111	+				-0.4
4,013,139	-				-1.5
4,013,145	-				-1.1
4,013,145	-				+0.8
4,013,166	+				-2.0
4,013,166	+				+2.3
4,013,167	-				-0.8
4,013,235	-				-2.6
4,013,235	-				+1.3
4,013,246	-				-0.8
4,013,246	-				+0.6
4,013,246	-				-0.4
4,013,322	+				-0.1
4,013,323	-				-0.5
4,013,374	+				+0.4
4,013,383	+				+1.2
4,013,385	+				+1.8
4,013,385	+				-0.0
4,013,386	-				+0.5
4,013,473	-		Echvi_3396	0.14	-0.8
4,013,502	+		Echvi_3396	0.16	+0.8
4,013,502	+		Echvi_3396	0.16	-0.5
4,013,502	+		Echvi_3396	0.16	-1.8
4,013,503	-		Echvi_3396	0.16	-0.2
4,013,503	-		Echvi_3396	0.16	+0.2
4,013,503	-		Echvi_3396	0.16	-0.2
4,013,551	+		Echvi_3396	0.19	+0.8
4,013,552	-		Echvi_3396	0.19	-1.2
4,013,552	-		Echvi_3396	0.19	+0.5
4,013,572	-		Echvi_3396	0.20	-0.2
4,013,676	-		Echvi_3396	0.27	-1.6
4,013,676	-		Echvi_3396	0.27	+2.0
4,013,683	+		Echvi_3396	0.27	-1.0
4,013,683	+		Echvi_3396	0.27	+0.8
4,013,683	+		Echvi_3396	0.27	+1.1
4,013,684	-		Echvi_3396	0.27	+0.4
4,013,787	+		Echvi_3396	0.34	+1.8
4,013,864	+		Echvi_3396	0.38	-0.5
4,013,865	-		Echvi_3396	0.38	-0.1
4,013,901	+		Echvi_3396	0.40	+0.6
4,013,902	-		Echvi_3396	0.41	-0.1
4,013,911	-		Echvi_3396	0.41	-0.8
4,013,911	-		Echvi_3396	0.41	-3.1
4,014,004	+		Echvi_3396	0.47	-0.0
4,014,004	+		Echvi_3396	0.47	-1.8
4,014,004	+		Echvi_3396	0.47	-0.3
4,014,005	-		Echvi_3396	0.47	+1.2
4,014,005	-		Echvi_3396	0.47	-2.8
4,014,005	-		Echvi_3396	0.47	-1.0
4,014,005	-		Echvi_3396	0.47	-1.1
4,014,027	+		Echvi_3396	0.48	-0.8
4,014,027	+		Echvi_3396	0.48	+0.6
4,014,027	+		Echvi_3396	0.48	-2.1
4,014,027	+		Echvi_3396	0.48	-0.8
4,014,028	-		Echvi_3396	0.48	-0.2
4,014,112	-		Echvi_3396	0.53	-0.9
4,014,117	-		Echvi_3396	0.54	-0.6
4,014,161	-		Echvi_3396	0.56	-1.1
4,014,161	-		Echvi_3396	0.56	-1.1
4,014,172	-		Echvi_3396	0.57	+0.3
4,014,172	-		Echvi_3396	0.57	+0.1
4,014,284	-		Echvi_3396	0.64	-0.5
4,014,290	-		Echvi_3396	0.64	+0.2
4,014,317	+		Echvi_3396	0.66	-1.3
4,014,355	-		Echvi_3396	0.68	+1.2
4,014,355	-		Echvi_3396	0.68	+4.6
4,014,355	-		Echvi_3396	0.68	+1.2
4,014,360	+		Echvi_3396	0.69	+0.7
4,014,361	-		Echvi_3396	0.69	-1.2
4,014,371	+		Echvi_3396	0.69	-0.3
4,014,372	-		Echvi_3396	0.69	-1.1
4,014,381	-		Echvi_3396	0.70	-1.5
4,014,385	+		Echvi_3396	0.70	-2.5
4,014,413	+		Echvi_3396	0.72	+0.1
4,014,538	-		Echvi_3396	0.79	-0.3
4,014,550	-		Echvi_3396	0.80	-0.4
4,014,550	-		Echvi_3396	0.80	-0.0
4,014,613	-		Echvi_3396	0.84	+0.8
4,014,718	+				-0.9
4,014,779	+				+0.5
4,014,856	+				-0.2
4,014,857	-				+0.2
4,014,875	-				-1.1
4,014,877	+				+0.2
4,014,878	-				-1.4
4,014,878	-				-1.3
4,014,932	-				+0.7
4,015,020	-				-1.1
4,015,045	+				+0.8
4,015,060	-				+1.4
4,015,157	+				+0.6
4,015,158	-				+0.5
4,015,172	-				+0.2
4,015,180	+				-0.2
4,015,181	-				+0.1
4,015,236	-				-0.0
4,015,250	+				+0.0
4,015,263	-				-0.9
4,015,263	-				+0.3
4,015,275	-				+2.8
4,015,275	-				+0.3
4,015,283	+				+1.2
4,015,283	+				+0.5
4,015,303	+				-0.5
4,015,303	+				+0.3
4,015,303	+				-0.2
4,015,304	-				-0.0
4,015,304	-				-0.2
4,015,304	-				-0.4
4,015,379	-				+0.7
4,015,385	+		Echvi_3397	0.10	+0.1
4,015,390	-		Echvi_3397	0.11	-0.3
4,015,390	-		Echvi_3397	0.11	+0.1
4,015,548	+		Echvi_3397	0.23	-0.4
4,015,549	-		Echvi_3397	0.23	-0.5
4,015,590	+		Echvi_3397	0.26	+0.3
4,015,604	-		Echvi_3397	0.28	-1.5
4,015,674	+		Echvi_3397	0.33	-0.2
4,015,674	+		Echvi_3397	0.33	+0.8
4,015,749	-		Echvi_3397	0.39	-1.5
4,015,749	-		Echvi_3397	0.39	+1.1
4,015,761	+		Echvi_3397	0.40	-2.7
4,015,761	+		Echvi_3397	0.40	-1.2
4,015,762	-		Echvi_3397	0.40	-0.1
4,015,762	-		Echvi_3397	0.40	-0.4
4,015,836	-		Echvi_3397	0.46	+0.4
4,015,855	-		Echvi_3397	0.47	-1.9
4,015,860	+		Echvi_3397	0.48	-1.0
4,015,861	-		Echvi_3397	0.48	-1.5
4,015,861	-		Echvi_3397	0.48	-2.3
4,015,867	-		Echvi_3397	0.48	-1.4