Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3216

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
3,816,729	-				-0.6
3,816,822	-				+0.1
3,816,822	-				-0.6
3,816,832	+				+0.6
3,816,939	-				+0.2
3,816,939	-				+1.8
3,816,958	-				-0.4
3,816,971	-				+0.8
3,817,113	+				-0.6
3,817,114	-				-0.3
3,817,137	+				+0.5
3,817,137	+				+0.1
3,817,137	+				+0.8
3,817,138	-				-0.4
3,817,184	+		Echvi_3215	0.22	-0.2
3,817,184	+		Echvi_3215	0.22	-0.8
3,817,185	-		Echvi_3215	0.22	-2.7
3,817,227	-		Echvi_3215	0.34	-1.3
3,817,300	+		Echvi_3215	0.56	-0.1
3,817,300	+		Echvi_3215	0.56	+0.0
3,817,301	-		Echvi_3215	0.56	-0.2
3,817,301	-		Echvi_3215	0.56	-2.1
3,817,332	+		Echvi_3215	0.65	+0.6
3,817,368	+		Echvi_3215	0.75	-0.4
3,817,547	+				-1.4
3,817,577	-				+0.6
3,817,626	-				+0.4
3,817,627	+				-1.2
3,817,659	+				-0.6
3,817,667	-				+1.4
3,817,808	+		Echvi_3216	0.24	+1.5
3,817,808	+		Echvi_3216	0.24	-1.0
3,817,809	-		Echvi_3216	0.24	-2.8
3,817,880	-		Echvi_3216	0.36	+3.4
3,817,880	-		Echvi_3216	0.36	+1.1
3,817,880	-		Echvi_3216	0.36	-0.0
3,817,924	+		Echvi_3216	0.43	+1.6
3,817,926	+		Echvi_3216	0.43	+0.5
3,817,926	+		Echvi_3216	0.43	+0.0
3,817,956	+		Echvi_3216	0.48	+1.0
3,817,956	+		Echvi_3216	0.48	-2.6
3,818,128	+		Echvi_3216	0.77	-1.1
3,818,149	-		Echvi_3216	0.80	+2.2
3,818,254	-				-1.4
3,818,362	+				-0.5
3,818,362	+				+1.0
3,818,365	+				+0.4
3,818,378	+				-0.8
3,818,390	-				-0.5
3,818,425	-				-0.5
3,818,444	-				+0.3
3,818,506	+				-0.1
3,818,546	+				+0.2
3,818,546	+				+1.2
3,818,547	-				+0.3
3,818,576	+				+0.2
3,818,577	-				-0.0
3,818,591	+				+0.1
3,818,592	-				+0.2
3,818,624	+		Echvi_3217	0.10	+0.3
3,818,702	+		Echvi_3217	0.16	-0.9
3,818,769	+		Echvi_3217	0.22	-0.4
3,818,806	+		Echvi_3217	0.25	-0.5
3,818,813	+		Echvi_3217	0.25	-0.3
3,818,872	+		Echvi_3217	0.30	-0.6
3,818,872	+		Echvi_3217	0.30	-0.1
3,818,872	+		Echvi_3217	0.30	-1.8
3,818,939	-		Echvi_3217	0.35	+0.1
3,818,943	+		Echvi_3217	0.35	-1.2
3,818,943	+		Echvi_3217	0.35	-1.0
3,818,943	+		Echvi_3217	0.35	-0.1
3,818,945	+		Echvi_3217	0.36	+0.2
3,818,945	+		Echvi_3217	0.36	-1.1
3,818,945	+		Echvi_3217	0.36	+0.5
3,818,945	+		Echvi_3217	0.36	-2.3
3,818,946	-		Echvi_3217	0.36	-0.9
3,818,981	+		Echvi_3217	0.38	+1.9
3,818,995	-		Echvi_3217	0.39	+0.2
3,819,049	+		Echvi_3217	0.44	-0.9
3,819,049	+		Echvi_3217	0.44	-0.2
3,819,063	-		Echvi_3217	0.45	-0.1
3,819,148	+		Echvi_3217	0.52	+0.0
3,819,181	-		Echvi_3217	0.54	-0.8
3,819,181	-		Echvi_3217	0.54	-0.5
3,819,181	-		Echvi_3217	0.54	+0.1
3,819,221	+		Echvi_3217	0.57	-0.3
3,819,230	-		Echvi_3217	0.58	+0.5
3,819,230	-		Echvi_3217	0.58	+0.2