Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3204

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
3,801,261	-				-1.2
3,801,284	+				-1.6
3,801,285	-				-1.1
3,801,285	-				+2.8
3,801,292	-				+0.4
3,801,292	-				+0.8
3,801,297	+				-3.0
3,801,306	-				+0.8
3,801,306	-				+1.5
3,801,306	-				-0.5
3,801,417	-				-0.1
3,801,506	+				+0.2
3,801,506	+				+0.5
3,801,507	-				+0.6
3,801,507	-				+0.7
3,801,507	-				-0.1
3,801,507	-				-0.3
3,801,518	-				+0.1
3,801,551	+				-2.7
3,801,551	+				+0.0
3,801,552	-				-0.6
3,801,552	-				-0.3
3,801,552	-				-0.2
3,801,597	-				-2.8
3,801,597	-				+0.1
3,801,640	+				-0.9
3,801,664	+				-0.3
3,801,664	+				+0.3
3,801,665	-				+0.2
3,801,674	+				-1.4
3,801,691	-				-0.5
3,801,719	-				-0.6
3,801,719	-				-0.7
3,801,719	-				+0.1
3,801,750	-				+0.6
3,801,858	+				+0.8
3,801,858	+				+0.6
3,801,880	+				-0.6
3,801,884	+				-1.5
3,801,885	-				-3.3
3,801,889	+				-1.8
3,801,890	-				-0.6
3,801,890	-				-0.2
3,801,983	+				+1.1
3,801,983	+				+0.9
3,801,984	-				+1.9
3,801,984	-				-1.5
3,802,019	-				-0.2
3,802,033	-				-0.2
3,802,039	+				+0.2
3,802,197	+				-0.2
3,802,222	-				-1.1
3,802,253	+				+0.0
3,802,283	-				+0.5
3,802,333	+		Echvi_3204	0.14	-2.7
3,802,333	+		Echvi_3204	0.14	-1.0
3,802,333	+		Echvi_3204	0.14	-1.0
3,802,334	-		Echvi_3204	0.14	-1.4
3,802,338	+		Echvi_3204	0.15	+1.0
3,802,339	-		Echvi_3204	0.15	+0.7
3,802,340	+		Echvi_3204	0.15	-1.5
3,802,341	-		Echvi_3204	0.15	+0.0
3,802,341	-		Echvi_3204	0.15	+0.5
3,802,341	-		Echvi_3204	0.15	-1.3
3,802,341	-		Echvi_3204	0.15	+0.4
3,802,341	-		Echvi_3204	0.15	-0.8
3,802,416	-		Echvi_3204	0.28	-0.5
3,802,416	-		Echvi_3204	0.28	-1.1
3,802,486	-		Echvi_3204	0.40	-0.2
3,802,486	-		Echvi_3204	0.40	+1.4
3,802,496	+		Echvi_3204	0.42	-1.2
3,802,497	-		Echvi_3204	0.42	+1.8
3,802,497	-		Echvi_3204	0.42	-1.1
3,802,550	-		Echvi_3204	0.51	-2.5
3,802,643	+		Echvi_3204	0.67	+0.3
3,802,653	+		Echvi_3204	0.69	-0.6
3,802,813	+				-0.3
3,802,898	+				-0.6
3,802,908	+		Echvi_3205	0.11	-0.6
3,803,064	+		Echvi_3205	0.32	+0.5
3,803,065	-		Echvi_3205	0.32	-1.2
3,803,065	-		Echvi_3205	0.32	+1.6
3,803,065	-		Echvi_3205	0.32	+0.2
3,803,065	-		Echvi_3205	0.32	+2.7
3,803,267	-		Echvi_3205	0.61	+1.2
3,803,267	-		Echvi_3205	0.61	-0.2
3,803,267	-		Echvi_3205	0.61	-0.6
3,803,276	+		Echvi_3205	0.62	-0.4
3,803,312	-		Echvi_3205	0.67	-0.4
3,803,450	-		Echvi_3205	0.86	+0.5
3,803,524	+				+1.8
3,803,524	+				-0.6
3,803,525	-				-1.3
3,803,525	-				-0.6
3,803,527	+				-1.8
3,803,555	-				-0.0
3,803,573	+				-1.5
3,803,574	-				+0.2
3,803,603	+				-0.5
3,803,626	+				-0.6
3,803,626	+				-0.7
3,803,627	-				-0.2
3,803,675	+		Echvi_3206	0.10	-1.3
3,803,706	-		Echvi_3206	0.12	-0.4
3,803,706	-		Echvi_3206	0.12	+1.0
3,803,706	-		Echvi_3206	0.12	-2.3
3,803,742	+		Echvi_3206	0.15	-0.2
3,803,742	+		Echvi_3206	0.15	-0.6
3,803,743	-		Echvi_3206	0.15	-0.8
3,803,746	+		Echvi_3206	0.15	-1.7
3,803,747	-		Echvi_3206	0.16	-0.9
3,803,747	-		Echvi_3206	0.16	+0.1
3,803,748	+		Echvi_3206	0.16	+0.4
3,803,750	+		Echvi_3206	0.16	-1.8
3,803,751	-		Echvi_3206	0.16	+1.3
3,803,751	-		Echvi_3206	0.16	-1.2
3,803,764	+		Echvi_3206	0.17	-0.8
3,803,782	+		Echvi_3206	0.18	+0.8
3,803,785	-		Echvi_3206	0.18	+0.8
3,803,830	+		Echvi_3206	0.22	-1.0