Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2887

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
3,457,062	+		Echvi_2885	0.63	+0.6
3,457,063	-		Echvi_2885	0.63	+1.8
3,457,063	-		Echvi_2885	0.63	-0.0
3,457,063	-		Echvi_2885	0.63	+0.1
3,457,063	-		Echvi_2885	0.63	+0.4
3,457,063	-		Echvi_2885	0.63	-0.2
3,457,171	+		Echvi_2885	0.68	+0.1
3,457,197	-		Echvi_2885	0.69	+1.0
3,457,299	+		Echvi_2885	0.74	-0.2
3,457,301	+		Echvi_2885	0.74	-1.2
3,457,301	+		Echvi_2885	0.74	+1.1
3,457,302	-		Echvi_2885	0.74	+0.2
3,457,328	+		Echvi_2885	0.76	-0.1
3,457,328	+		Echvi_2885	0.76	+0.1
3,457,328	+		Echvi_2885	0.76	-0.2
3,457,329	-		Echvi_2885	0.76	-2.3
3,457,332	+		Echvi_2885	0.76	-0.0
3,457,332	+		Echvi_2885	0.76	+0.6
3,457,332	+		Echvi_2885	0.76	+0.5
3,457,333	-		Echvi_2885	0.76	-1.6
3,457,333	-		Echvi_2885	0.76	-1.1
3,457,338	-		Echvi_2885	0.76	-1.1
3,457,435	-		Echvi_2885	0.81	+0.4
3,457,518	+		Echvi_2885	0.84	-0.4
3,457,526	+		Echvi_2885	0.85	-1.4
3,457,526	+		Echvi_2885	0.85	-0.2
3,457,526	+		Echvi_2885	0.85	+1.0
3,457,527	-		Echvi_2885	0.85	+0.7
3,457,527	-		Echvi_2885	0.85	-0.8
3,457,572	+		Echvi_2885	0.87	+0.1
3,457,573	-		Echvi_2885	0.87	-2.1
3,457,653	+				-1.6
3,457,740	-				+0.4
3,457,740	-				+1.4
3,457,783	-				-1.9
3,457,787	-				-0.2
3,457,987	-		Echvi_2886	0.63	+0.8
3,458,066	+				+3.0
3,458,067	-				-0.1
3,458,067	-				-1.6
3,458,117	+				-0.3
3,458,117	+				-1.1
3,458,144	+		Echvi_2887	0.11	-1.4
3,458,145	-		Echvi_2887	0.11	-0.5
3,458,233	+		Echvi_2887	0.20	+0.8
3,458,234	-		Echvi_2887	0.20	+0.9
3,458,234	-		Echvi_2887	0.20	+0.8
3,458,247	+		Echvi_2887	0.22	-1.9
3,458,412	+		Echvi_2887	0.39	+1.8
3,458,431	+		Echvi_2887	0.41	-0.4
3,458,431	+		Echvi_2887	0.41	-0.1
3,458,432	-		Echvi_2887	0.41	+0.2
3,458,432	-		Echvi_2887	0.41	-0.6
3,458,432	-		Echvi_2887	0.41	-0.4
3,458,432	-		Echvi_2887	0.41	-1.4
3,458,480	-		Echvi_2887	0.46	-0.9
3,458,646	-		Echvi_2887	0.64	+0.0
3,458,648	-		Echvi_2887	0.64	-0.8
3,458,696	+		Echvi_2887	0.69	-0.7
3,458,767	+		Echvi_2887	0.77	-0.5
3,458,842	+		Echvi_2887	0.85	+0.3
3,458,843	-		Echvi_2887	0.85	-0.8
3,458,843	-		Echvi_2887	0.85	-0.8
3,458,902	+				+0.2
3,458,902	+				-0.4
3,458,903	-				-0.5
3,458,903	-				-0.0
3,458,903	-				+0.1
3,458,955	-				-0.9
3,458,955	-				-0.9
3,458,955	-				-0.8
3,458,976	-				+0.2
3,458,976	-				-0.7
3,458,976	-				-1.5
3,458,976	-				+1.2
3,458,976	-				+0.3
3,458,983	+				+0.8
3,458,988	-				+0.2
3,458,988	-				-1.3
3,459,111	+				-1.4
3,459,261	+		Echvi_2888	0.18	-0.3
3,459,261	+		Echvi_2888	0.18	-0.0
3,459,261	+		Echvi_2888	0.18	-0.4
3,459,266	+		Echvi_2888	0.19	-0.2
3,459,298	-		Echvi_2888	0.21	+1.8
3,459,303	-		Echvi_2888	0.21	+0.1
3,459,306	-		Echvi_2888	0.22	-0.9
3,459,310	-		Echvi_2888	0.22	-0.6
3,459,423	+		Echvi_2888	0.30	-0.0
3,459,529	+		Echvi_2888	0.37	+1.0
3,459,530	-		Echvi_2888	0.37	-1.0
3,459,628	-		Echvi_2888	0.44	-0.7
3,459,663	+		Echvi_2888	0.47	+1.0
3,459,731	-		Echvi_2888	0.52	+0.0
3,459,731	-		Echvi_2888	0.52	-2.4
3,459,736	+		Echvi_2888	0.52	-1.6
3,459,737	-		Echvi_2888	0.52	+0.8
3,459,813	+		Echvi_2888	0.57	-0.3
3,459,813	+		Echvi_2888	0.57	-0.0
3,459,813	+		Echvi_2888	0.57	-0.2
3,459,813	+		Echvi_2888	0.57	+0.1
3,459,814	-		Echvi_2888	0.57	-0.3
3,459,814	-		Echvi_2888	0.57	+0.0
3,459,814	-		Echvi_2888	0.57	-0.7
3,459,814	-		Echvi_2888	0.57	+0.1
3,459,814	-		Echvi_2888	0.57	-0.0
3,459,818	+		Echvi_2888	0.58	+0.6
3,459,819	-		Echvi_2888	0.58	-0.7
3,459,819	-		Echvi_2888	0.58	-0.8
3,459,819	-		Echvi_2888	0.58	+0.0
3,459,819	-		Echvi_2888	0.58	+0.2
3,459,819	-		Echvi_2888	0.58	-1.1
3,459,966	+		Echvi_2888	0.68	+1.5
3,459,967	-		Echvi_2888	0.68	+0.2
3,459,970	-		Echvi_2888	0.68	+0.2
3,459,970	-		Echvi_2888	0.68	-0.3