Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2750

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
3,270,814	+		Echvi_2749	0.20	+0.9
3,270,815	-		Echvi_2749	0.20	+0.1
3,270,817	+		Echvi_2749	0.21	+0.3
3,270,817	+		Echvi_2749	0.21	-0.2
3,270,817	+		Echvi_2749	0.21	+0.5
3,270,818	-		Echvi_2749	0.21	-0.6
3,270,884	-		Echvi_2749	0.27	-0.3
3,270,887	-		Echvi_2749	0.27	+0.2
3,270,896	+		Echvi_2749	0.28	-1.3
3,270,997	-		Echvi_2749	0.37	-1.0
3,270,997	-		Echvi_2749	0.37	+1.7
3,271,107	-		Echvi_2749	0.47	-0.8
3,271,129	+		Echvi_2749	0.49	+1.9
3,271,130	-		Echvi_2749	0.49	-2.3
3,271,213	+		Echvi_2749	0.57	-0.0
3,271,288	-		Echvi_2749	0.64	+0.7
3,271,386	+		Echvi_2749	0.73	-0.9
3,271,511	+		Echvi_2749	0.84	+0.3
3,271,537	+		Echvi_2749	0.87	-1.3
3,271,552	+		Echvi_2749	0.88	-0.5
3,271,646	-				-0.6
3,271,646	-				+0.2
3,271,655	-				+0.7
3,271,666	+				-0.2
3,271,686	+				-0.6
3,271,705	-				-0.3
3,271,730	+				+0.3
3,271,733	+				-0.7
3,271,733	+				+0.4
3,271,734	-				-0.3
3,271,734	-				+3.9
3,271,734	-				-0.9
3,271,734	-				+0.5
3,271,784	-				-0.5
3,271,801	+				+0.0
3,271,841	+		Echvi_2750	0.11	-0.8
3,271,842	-		Echvi_2750	0.11	+0.4
3,271,842	-		Echvi_2750	0.11	+0.5
3,271,881	+		Echvi_2750	0.14	+1.9
3,271,886	-		Echvi_2750	0.15	+0.9
3,271,886	-		Echvi_2750	0.15	+1.7
3,271,929	+		Echvi_2750	0.19	+0.3
3,271,936	-		Echvi_2750	0.19	-0.2
3,271,941	-		Echvi_2750	0.20	-0.2
3,271,941	-				+0.5
3,271,941	-		Echvi_2750	0.20	-1.2
3,271,944	-		Echvi_2750	0.20	+0.9
3,271,944	-		Echvi_2750	0.20	+0.3
3,271,944	-		Echvi_2750	0.20	-1.3
3,271,944	-		Echvi_2750	0.20	+1.1
3,271,944	-		Echvi_2750	0.20	-0.5
3,271,953	-		Echvi_2750	0.21	+0.7
3,271,957	+		Echvi_2750	0.21	-2.3
3,272,011	+		Echvi_2750	0.26	-0.3
3,272,024	-		Echvi_2750	0.27	-1.0
3,272,059	+		Echvi_2750	0.31	+0.4
3,272,059	+		Echvi_2750	0.31	+0.5
3,272,072	+		Echvi_2750	0.32	+0.2
3,272,072	+		Echvi_2750	0.32	+1.4
3,272,073	-		Echvi_2750	0.32	+0.4
3,272,076	+		Echvi_2750	0.32	-1.3
3,272,077	-		Echvi_2750	0.32	+0.6
3,272,077	-		Echvi_2750	0.32	-0.5
3,272,078	+		Echvi_2750	0.32	-2.0
3,272,094	-		Echvi_2750	0.34	+0.2
3,272,152	-		Echvi_2750	0.39	+0.2
3,272,154	+		Echvi_2750	0.39	-1.8
3,272,159	+		Echvi_2750	0.40	+0.1
3,272,171	-		Echvi_2750	0.41	+1.1
3,272,216	+		Echvi_2750	0.45	+0.3
3,272,238	-		Echvi_2750	0.47	-0.0
3,272,282	+		Echvi_2750	0.51	+0.6
3,272,311	-		Echvi_2750	0.54	-0.1
3,272,316	-		Echvi_2750	0.54	+0.8
3,272,322	-		Echvi_2750	0.55	-0.6
3,272,374	-		Echvi_2750	0.59	-1.8
3,272,416	+		Echvi_2750	0.63	-0.5
3,272,417	-		Echvi_2750	0.63	-0.0
3,272,420	+		Echvi_2750	0.63	+0.4
3,272,426	+		Echvi_2750	0.64	-0.5
3,272,426	+		Echvi_2750	0.64	-0.0
3,272,516	+		Echvi_2750	0.72	-0.1
3,272,529	+		Echvi_2750	0.73	-0.1
3,272,530	-		Echvi_2750	0.74	-0.5
3,272,530	-		Echvi_2750	0.74	-0.0
3,272,546	-		Echvi_2750	0.75	+0.4
3,272,624	-		Echvi_2750	0.82	+1.7
3,272,624	-		Echvi_2750	0.82	-1.9
3,272,625	+		Echvi_2750	0.82	-0.7
3,272,625	+		Echvi_2750	0.82	+1.9
3,272,625	+		Echvi_2750	0.82	+0.3
3,272,626	-		Echvi_2750	0.82	+0.6
3,272,626	-		Echvi_2750	0.82	+0.1
3,272,626	-		Echvi_2750	0.82	+0.7
3,272,627	+		Echvi_2750	0.82	+1.2
3,272,627	+		Echvi_2750	0.82	-1.5
3,272,628	-		Echvi_2750	0.82	-0.9
3,272,628	-		Echvi_2750	0.82	-1.7
3,272,628	-		Echvi_2750	0.82	+1.9
3,272,632	+		Echvi_2750	0.83	+1.9
3,272,633	-		Echvi_2750	0.83	-0.9
3,272,645	+		Echvi_2750	0.84	+2.3
3,272,660	+		Echvi_2750	0.85	+1.2
3,272,701	+		Echvi_2750	0.89	-0.5
3,272,732	-				-0.9
3,272,745	+				-0.9
3,272,746	-				-0.3
3,272,760	+				+1.1
3,272,761	-				+0.3
3,272,761	-				-0.1
3,272,761	-				-0.1
3,272,821	-				+1.3
3,272,821	-				+0.2
3,272,828	-				+0.1
3,272,830	+				+0.9
3,272,873	-				-0.4
3,272,873	-				+0.4
3,272,873	-				-2.0
3,272,879	+				+0.2
3,272,880	-				+0.4
3,272,880	-				-0.0
3,272,880	-				+0.3
3,272,885	+				-0.6
3,272,886	-				-1.7
3,272,901	-				-0.6
3,272,903	+				+0.2
3,272,905	+				-1.1
3,272,906	-				-0.0
3,272,906	-				-0.5
3,272,913	+				+1.0
3,272,947	+				+2.5
3,272,954	-				-0.4
3,272,965	-				-0.3
3,273,026	+				-0.1
3,273,040	+				+0.2
3,273,040	+				+1.9
3,273,041	-				-1.3
3,273,161	+				+0.1
3,273,162	-				-0.9
3,273,164	+				-1.6
3,273,193	+				+0.9
3,273,291	+		Echvi_2751	0.18	+0.3
3,273,292	-		Echvi_2751	0.18	+0.2
3,273,292	-		Echvi_2751	0.18	+0.9
3,273,293	+		Echvi_2751	0.18	+0.3
3,273,293	+		Echvi_2751	0.18	-1.0
3,273,293	+		Echvi_2751	0.18	+0.0
3,273,293	+		Echvi_2751	0.18	+0.3
3,273,294	-		Echvi_2751	0.18	-2.4
3,273,296	+		Echvi_2751	0.19	-0.3
3,273,296	+		Echvi_2751	0.19	+1.0
3,273,296	+		Echvi_2751	0.19	+0.4
3,273,297	-		Echvi_2751	0.19	+0.0
3,273,297	-		Echvi_2751	0.19	+0.2
3,273,297	-		Echvi_2751	0.19	+1.1
3,273,334	+		Echvi_2751	0.25	-1.1
3,273,375	-		Echvi_2751	0.32	+0.3
3,273,595	+		Echvi_2751	0.69	-0.3
3,273,676	+		Echvi_2751	0.82	-1.0
3,273,676	+		Echvi_2751	0.82	-0.5
3,273,692	+		Echvi_2751	0.85	-3.5
3,273,735	-				-0.3
3,273,737	+				+1.5
3,273,737	+				+1.2
3,273,780	-				-0.4
3,273,801	-				-1.1