Experiment: m.b. Nalidixic 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2074 and Echvi_2075 are separated by 7 nucleotides Echvi_2075 and Echvi_2076 are separated by 206 nucleotides
Echvi_2074: Echvi_2074 - tRNA(Ile)-lysidine synthetase, N-terminal domain/tRNA(Ile)-lysidine synthetase, C-terminal domain, at 2,444,890 to 2,446,212
_2074
Echvi_2075: Echvi_2075 - Cyclic nucleotide-binding domain., at 2,446,220 to 2,446,735
_2075
Echvi_2076: Echvi_2076 - malate dehydrogenase, NAD-dependent, at 2,446,942 to 2,447,880
_2076
Position (kb)
2446
2447 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2446.206 kb on - strand at 2446.244 kb on + strand at 2446.305 kb on + strand, within Echvi_2075 at 2446.341 kb on + strand, within Echvi_2075 at 2446.356 kb on - strand, within Echvi_2075 at 2446.371 kb on + strand, within Echvi_2075 at 2446.406 kb on + strand, within Echvi_2075 at 2446.406 kb on + strand, within Echvi_2075 at 2446.407 kb on - strand, within Echvi_2075 at 2446.407 kb on - strand, within Echvi_2075 at 2446.407 kb on - strand, within Echvi_2075 at 2446.407 kb on - strand, within Echvi_2075 at 2446.407 kb on - strand, within Echvi_2075 at 2446.407 kb on - strand, within Echvi_2075 at 2446.407 kb on - strand, within Echvi_2075 at 2446.467 kb on + strand, within Echvi_2075 at 2446.472 kb on - strand, within Echvi_2075 at 2446.472 kb on - strand, within Echvi_2075 at 2446.533 kb on - strand, within Echvi_2075 at 2446.584 kb on - strand, within Echvi_2075 at 2446.592 kb on - strand, within Echvi_2075 at 2446.621 kb on - strand, within Echvi_2075 at 2446.652 kb on + strand, within Echvi_2075 at 2446.652 kb on + strand, within Echvi_2075 at 2446.652 kb on + strand, within Echvi_2075 at 2446.652 kb on + strand, within Echvi_2075 at 2446.652 kb on + strand, within Echvi_2075 at 2446.653 kb on - strand, within Echvi_2075 at 2446.653 kb on - strand, within Echvi_2075 at 2446.655 kb on + strand, within Echvi_2075 at 2446.656 kb on - strand, within Echvi_2075 at 2446.656 kb on - strand, within Echvi_2075 at 2446.688 kb on + strand at 2446.693 kb on + strand at 2446.693 kb on + strand at 2446.693 kb on + strand at 2446.694 kb on - strand at 2446.733 kb on + strand at 2446.766 kb on + strand at 2446.767 kb on - strand at 2446.851 kb on - strand at 2446.851 kb on - strand at 2446.925 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.008 mg/ml remove 2,446,206 - +1.8 2,446,244 + -2.0 2,446,305 + Echvi_2075 0.16 -0.3 2,446,341 + Echvi_2075 0.23 -0.7 2,446,356 - Echvi_2075 0.26 +0.5 2,446,371 + Echvi_2075 0.29 -0.4 2,446,406 + Echvi_2075 0.36 -0.4 2,446,406 + Echvi_2075 0.36 +1.4 2,446,407 - Echvi_2075 0.36 -0.6 2,446,407 - Echvi_2075 0.36 +0.4 2,446,407 - Echvi_2075 0.36 -0.8 2,446,407 - Echvi_2075 0.36 -0.3 2,446,407 - Echvi_2075 0.36 -0.3 2,446,407 - Echvi_2075 0.36 +0.4 2,446,407 - Echvi_2075 0.36 -0.3 2,446,467 + Echvi_2075 0.48 +0.6 2,446,472 - Echvi_2075 0.49 +1.8 2,446,472 - Echvi_2075 0.49 -0.8 2,446,533 - Echvi_2075 0.61 +0.5 2,446,584 - Echvi_2075 0.71 -2.0 2,446,592 - Echvi_2075 0.72 -0.6 2,446,621 - Echvi_2075 0.78 -0.7 2,446,652 + Echvi_2075 0.84 -0.6 2,446,652 + Echvi_2075 0.84 +0.0 2,446,652 + Echvi_2075 0.84 +0.0 2,446,652 + Echvi_2075 0.84 -0.0 2,446,652 + Echvi_2075 0.84 -0.2 2,446,653 - Echvi_2075 0.84 +0.1 2,446,653 - Echvi_2075 0.84 -0.5 2,446,655 + Echvi_2075 0.84 -0.4 2,446,656 - Echvi_2075 0.84 +1.2 2,446,656 - Echvi_2075 0.84 -1.5 2,446,688 + +0.9 2,446,693 + +0.8 2,446,693 + -0.1 2,446,693 + +0.4 2,446,694 - -0.8 2,446,733 + +1.4 2,446,766 + +0.5 2,446,767 - +1.5 2,446,851 - +0.9 2,446,851 - +0.7 2,446,925 + +0.0
Or see this region's nucleotide sequence