Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1829

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
2,144,526	+				+0.1
2,144,527	-				-0.1
2,144,527	-				+2.7
2,144,608	+				-1.3
2,144,608	+				-0.2
2,144,635	-				-0.7
2,144,707	+		Echvi_1828	0.16	+0.7
2,144,708	-		Echvi_1828	0.16	-1.2
2,144,783	-		Echvi_1828	0.25	+0.9
2,144,845	-		Echvi_1828	0.32	-1.4
2,144,845	-		Echvi_1828	0.32	-0.3
2,144,845	-		Echvi_1828	0.32	+0.6
2,144,845	-		Echvi_1828	0.32	+1.3
2,144,950	+		Echvi_1828	0.44	+0.2
2,144,951	-		Echvi_1828	0.44	+1.4
2,144,951	-		Echvi_1828	0.44	-0.9
2,145,015	-		Echvi_1828	0.51	-0.1
2,145,044	+		Echvi_1828	0.55	+0.6
2,145,044	+		Echvi_1828	0.55	-1.1
2,145,045	-		Echvi_1828	0.55	-0.8
2,145,045	-		Echvi_1828	0.55	-0.2
2,145,046	+		Echvi_1828	0.55	+0.1
2,145,046	+		Echvi_1828	0.55	-1.7
2,145,046	+		Echvi_1828	0.55	-1.3
2,145,046	+		Echvi_1828	0.55	-0.3
2,145,046	+		Echvi_1828	0.55	+1.2
2,145,047	-		Echvi_1828	0.55	-0.3
2,145,047	-		Echvi_1828	0.55	+0.1
2,145,047	-		Echvi_1828	0.55	+0.4
2,145,047	-		Echvi_1828	0.55	-0.8
2,145,047	-		Echvi_1828	0.55	+0.5
2,145,124	+		Echvi_1828	0.64	+0.0
2,145,297	+		Echvi_1828	0.84	-0.5
2,145,330	+		Echvi_1828	0.87	-2.9
2,145,331	-		Echvi_1828	0.87	+2.3
2,145,375	+				-2.4
2,145,383	+				-0.6
2,145,418	+				-1.1
2,145,434	+				-0.3
2,145,434	+				-0.6
2,145,434	+				-1.4
2,145,434	+				-1.1
2,145,434	+				-0.4
2,145,434	+				-0.4
2,145,434	+				-2.1
2,145,434	+				-0.8
2,145,435	-				-0.8
2,145,435	-				-3.1
2,145,435	-				+0.0
2,145,435	-				-0.5
2,145,435	-				-3.2
2,145,435	-				+0.7
2,145,435	-				-2.1
2,145,440	+				-2.4
2,145,440	+				-1.7
2,145,441	-				-0.6
2,145,442	+				-1.5
2,145,443	-				+1.1
2,145,443	-				-0.6
2,145,533	+		Echvi_1829	0.21	+0.1
2,145,536	+		Echvi_1829	0.21	-0.6
2,145,590	+		Echvi_1829	0.32	-0.3
2,145,590	+		Echvi_1829	0.32	-2.9
2,145,591	-		Echvi_1829	0.33	+0.0
2,145,591	-		Echvi_1829	0.33	-1.6
2,145,612	+		Echvi_1829	0.37	-2.8
2,145,612	+		Echvi_1829	0.37	-1.2
2,145,612	+		Echvi_1829	0.37	-0.5
2,145,614	+		Echvi_1829	0.37	-0.5
2,145,672	-		Echvi_1829	0.49	+0.2
2,145,699	+		Echvi_1829	0.55	-1.5
2,145,699	+		Echvi_1829	0.55	-0.5
2,145,699	+		Echvi_1829	0.55	-2.0
2,145,786	-		Echvi_1829	0.73	-1.4
2,145,819	+		Echvi_1829	0.79	-2.4
2,145,819	+		Echvi_1829	0.79	+3.3
2,145,918	+				-0.8
2,145,918	+				-1.2
2,145,919	-				-0.6
2,145,919	-				+0.7
2,145,919	-				-0.6
2,145,951	+				-2.1
2,145,974	+				-1.4
2,145,974	+				-0.1
2,145,974	+				-1.1
2,145,975	-				+1.4
2,145,975	-				+1.1
2,145,975	-				+0.4
2,145,977	-				-2.1
2,146,046	+		Echvi_1830	0.13	-1.1
2,146,047	-		Echvi_1830	0.13	+0.3
2,146,047	-		Echvi_1830	0.13	+1.0
2,146,048	+		Echvi_1830	0.13	-1.1
2,146,048	+		Echvi_1830	0.13	-1.7
2,146,049	-		Echvi_1830	0.13	+0.6
2,146,049	-		Echvi_1830	0.13	+0.8
2,146,068	+		Echvi_1830	0.15	-3.3
2,146,068	+		Echvi_1830	0.15	-2.1
2,146,099	+		Echvi_1830	0.18	+0.0
2,146,100	-		Echvi_1830	0.18	+3.7
2,146,112	+		Echvi_1830	0.19	+0.7
2,146,113	-		Echvi_1830	0.19	+2.8
2,146,113	-		Echvi_1830	0.19	+2.0
2,146,136	+		Echvi_1830	0.22	-1.7
2,146,136	+		Echvi_1830	0.22	-2.2
2,146,137	-		Echvi_1830	0.22	-0.4
2,146,153	+		Echvi_1830	0.23	-1.6
2,146,154	-		Echvi_1830	0.24	+0.4
2,146,237	-		Echvi_1830	0.32	+1.4
2,146,248	-		Echvi_1830	0.33	+2.7
2,146,249	+		Echvi_1830	0.33	+0.9
2,146,250	-		Echvi_1830	0.33	+0.0
2,146,250	-		Echvi_1830	0.33	+2.7
2,146,263	+		Echvi_1830	0.35	-1.9
2,146,263	+		Echvi_1830	0.35	+0.1
2,146,263	+		Echvi_1830	0.35	-2.4
2,146,263	+		Echvi_1830	0.35	-0.7
2,146,271	+		Echvi_1830	0.35	+1.0
2,146,271	+		Echvi_1830	0.35	-1.1
2,146,272	-		Echvi_1830	0.35	+2.0
2,146,274	-		Echvi_1830	0.36	-0.1
2,146,274	-		Echvi_1830	0.36	-1.5
2,146,274	-		Echvi_1830	0.36	+1.0
2,146,303	-		Echvi_1830	0.39	+1.7
2,146,303	-		Echvi_1830	0.39	+1.2
2,146,303	-		Echvi_1830	0.39	+0.4
2,146,345	-		Echvi_1830	0.43	+2.0
2,146,345	-		Echvi_1830	0.43	-1.1
2,146,365	+		Echvi_1830	0.45	-1.4
2,146,397	+		Echvi_1830	0.48	-2.0
2,146,434	+		Echvi_1830	0.52	-2.4
2,146,435	-		Echvi_1830	0.52	+1.9
2,146,465	+		Echvi_1830	0.55	-1.2
2,146,465	+		Echvi_1830	0.55	-4.0
2,146,465	+		Echvi_1830	0.55	-0.2
2,146,465	+		Echvi_1830	0.55	-1.7
2,146,465	+		Echvi_1830	0.55	-1.5
2,146,465	+		Echvi_1830	0.55	-2.9
2,146,465	+		Echvi_1830	0.55	-1.6
2,146,528	+		Echvi_1830	0.61	-0.7
2,146,528	+		Echvi_1830	0.61	-2.1
2,146,528	+		Echvi_1830	0.61	-1.5
2,146,528	+		Echvi_1830	0.61	-2.5
2,146,529	-		Echvi_1830	0.61	+0.6
2,146,529	-		Echvi_1830	0.61	-0.1
2,146,530	+		Echvi_1830	0.62	-0.9
2,146,531	-		Echvi_1830	0.62	+0.5
2,146,539	+		Echvi_1830	0.62	-2.7
2,146,540	-		Echvi_1830	0.63	+1.1
2,146,565	-		Echvi_1830	0.65	+0.5
2,146,566	+		Echvi_1830	0.65	-0.6
2,146,567	-		Echvi_1830	0.65	+0.5
2,146,619	-		Echvi_1830	0.71	+1.8
2,146,631	+		Echvi_1830	0.72	-2.0
2,146,660	-		Echvi_1830	0.75	+1.7
2,146,701	+		Echvi_1830	0.79	-0.9
2,146,702	-		Echvi_1830	0.79	-0.1
2,146,745	+		Echvi_1830	0.83	-2.3
2,146,746	-		Echvi_1830	0.83	+0.4
2,146,746	-		Echvi_1830	0.83	+2.2
2,146,746	-		Echvi_1830	0.83	+1.4
2,146,748	-		Echvi_1830	0.84	+0.1
2,146,751	-		Echvi_1830	0.84	+1.0
2,146,773	+		Echvi_1830	0.86	-2.2
2,146,777	+		Echvi_1830	0.86	-0.7
2,146,777	+		Echvi_1830	0.86	-0.7
2,146,777	+		Echvi_1830	0.86	-1.3
2,146,777	+		Echvi_1830	0.86	+2.2
2,146,778	-		Echvi_1830	0.87	+2.7
2,146,780	+		Echvi_1830	0.87	-1.8
2,146,789	+		Echvi_1830	0.88	-1.9
2,146,789	+		Echvi_1830	0.88	-0.8
2,146,790	-		Echvi_1830	0.88	+1.6
2,146,808	+		Echvi_1830	0.90	-2.9
2,146,832	+				-2.9
2,146,837	-				+2.1
2,146,837	-				+1.6